RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 SNAPC2Q13487 334 aa11.77□□□□□ -0.52
EPB41-208ENST00000460378 CCDC178Q5BJE1 867 aa11.77□□□□□ -0.52
EPB41-208ENST00000460378 CCDC8Q9H0W5 538 aaPredicted RBP11.77□□□□□ -0.52
EPB41-208ENST00000460378 MTIF3Q9H2K0 278 aaKnown RBP11.77□□□□□ -0.52
EPB41-208ENST00000460378 MEGF6O75095 1541 aa11.77□□□□□ -0.52
EPB41-208ENST00000460378 NEURL1BA8MQ27 555 aa11.77□□□□□ -0.53
EPB41-208ENST00000460378 RGL2O15211 777 aa11.77□□□□□ -0.53
EPB41-208ENST00000460378 RANBP6O60518 1105 aaKnown RBP11.77□□□□□ -0.53
EPB41-208ENST00000460378 CETPP11597 493 aa11.77□□□□□ -0.53
EPB41-208ENST00000460378 XBP1P17861 261 aa11.77□□□□□ -0.53
EPB41-208ENST00000460378 MCM9Q9NXL9 1143 aa11.77□□□□□ -0.53
EPB41-208ENST00000460378 RGMBQ6NW40 437 aa11.77□□□□□ -0.53
EPB41-208ENST00000460378 IQCA1Q86XH1 822 aa11.77□□□□□ -0.53
EPB41-208ENST00000460378 OTUD5Q96G74 571 aa11.77□□□□□ -0.53
EPB41-208ENST00000460378 PSMD1Q99460 953 aa11.77□□□□□ -0.53
EPB41-208ENST00000460378 INHBEP58166 350 aa11.77□□□□□ -0.53
EPB41-208ENST00000460378 ANKRD13AQ8IZ07 590 aa11.77□□□□□ -0.53
EPB41-208ENST00000460378 PARK7Q99497 189 aaKnown RBP11.77□□□□□ -0.53
EPB41-208ENST00000460378 GPSM2P81274 684 aa11.76□□□□□ -0.53
EPB41-208ENST00000460378 WRNIP1Q96S55 665 aa11.76□□□□□ -0.53
EPB41-208ENST00000460378 CSRNP1Q96S65 589 aa11.76□□□□□ -0.53
EPB41-208ENST00000460378 SIGLEC1Q9BZZ2 1709 aa11.76□□□□□ -0.53
EPB41-208ENST00000460378 TSPY2A6NKD2 308 aa11.76□□□□□ -0.53
EPB41-208ENST00000460378 ZNF710Q8N1W2 664 aa11.76□□□□□ -0.53
EPB41-208ENST00000460378 ZC3H15Q8WU90 426 aaKnown RBP11.76□□□□□ -0.53
EPB41-208ENST00000460378 IL1RAPL2Q9NP60 686 aa11.76□□□□□ -0.53
EPB41-208ENST00000460378 DDR1Q08345 913 aa11.76□□□□□ -0.53
EPB41-208ENST00000460378 STRIP1Q5VSL9 837 aa11.76□□□□□ -0.53
EPB41-208ENST00000460378 SAMD7Q7Z3H4 446 aa11.76□□□□□ -0.53
EPB41-208ENST00000460378 GREM2Q9H772 168 aa11.76□□□□□ -0.53
EPB41-208ENST00000460378 C1orf115Q9H7X2 142 aa11.76□□□□□ -0.53
EPB41-208ENST00000460378 SUPT16HQ9Y5B9 1047 aaKnown RBP11.76□□□□□ -0.53
EPB41-208ENST00000460378 ABCC4O15439 1325 aa11.76□□□□□ -0.53
EPB41-208ENST00000460378 SSH1Q8WYL5 1049 aa11.76□□□□□ -0.53
EPB41-208ENST00000460378 SEC63Q9UGP8 760 aaKnown RBP11.76□□□□□ -0.53
EPB41-208ENST00000460378 MYO5BQ9ULV0 1848 aa11.76□□□□□ -0.53
EPB41-208ENST00000460378 SEMA3EO15041 775 aa11.75□□□□□ -0.53
EPB41-208ENST00000460378 FKTNO75072 461 aa11.75□□□□□ -0.53
EPB41-208ENST00000460378 TSPY3P0CV98 308 aa11.75□□□□□ -0.53
EPB41-208ENST00000460378 TSPY8P0CW00 308 aa11.75□□□□□ -0.53
EPB41-208ENST00000460378 ZYXQ15942 572 aaKnown RBP11.75□□□□□ -0.53
EPB41-208ENST00000460378 MFSD14CQ5VZR4 134 aa11.75□□□□□ -0.53
EPB41-208ENST00000460378 HTATIP2Q9BUP3 242 aa11.75□□□□□ -0.53
EPB41-208ENST00000460378 GLIS2Q9BZE0 524 aaPredicted RBP11.75□□□□□ -0.53
EPB41-208ENST00000460378 BRMS1Q9HCU9 246 aa11.75□□□□□ -0.53
EPB41-208ENST00000460378 TRIM17Q9Y577 477 aa11.75□□□□□ -0.53
EPB41-208ENST00000460378 XRN1Q8IZH2 1706 aaKnown RBP11.75□□□□□ -0.53
EPB41-208ENST00000460378 ZEB2O60315 1214 aa11.75□□□□□ -0.53
EPB41-208ENST00000460378 TFRCP02786 760 aaKnown RBP11.75□□□□□ -0.53
EPB41-208ENST00000460378 GYG1P46976 350 aa11.75□□□□□ -0.53
EPB41-208ENST00000460378 GTF2A2P52657 109 aa11.75□□□□□ -0.53
EPB41-208ENST00000460378 KIAA2012Q0VF49 1180 aa11.75□□□□□ -0.53
EPB41-208ENST00000460378 MYOZ2Q9NPC6 264 aa11.75□□□□□ -0.53
EPB41-208ENST00000460378 ZBTB12Q9Y330 459 aaPredicted RBP11.75□□□□□ -0.53
EPB41-208ENST00000460378 FMN2Q9NZ56 1722 aa11.75□□□□□ -0.53
EPB41-208ENST00000460378 TAF1DQ9H5J8 278 aaPredicted RBP11.75□□□□□ -0.53
EPB41-208ENST00000460378 UBE2Q2LH0YL09 131 aa11.75□□□□□ -0.53
EPB41-208ENST00000460378 ZNF594Q96JF6 807 aaPredicted RBP11.75□□□□□ -0.53
EPB41-208ENST00000460378 GOPCQ9HD26 462 aa11.75□□□□□ -0.53
EPB41-208ENST00000460378 MAP3K9P80192 1104 aa11.74□□□□□ -0.53
EPB41-208ENST00000460378 AAMPQ13685 434 aa11.74□□□□□ -0.53
EPB41-208ENST00000460378 BICC1Q9H694 974 aaKnown RBP11.74□□□□□ -0.53
EPB41-208ENST00000460378 ELP3Q9H9T3 547 aa11.74□□□□□ -0.53
EPB41-208ENST00000460378 CCL15-CCL14A0A0B4J2E2 113 aa11.74□□□□□ -0.53
EPB41-208ENST00000460378 CCL15Q16663 113 aa11.74□□□□□ -0.53
EPB41-208ENST00000460378 TBC1D16Q8TBP0 767 aa11.74□□□□□ -0.53
EPB41-208ENST00000460378 CA8P35219 290 aa11.74□□□□□ -0.53
EPB41-208ENST00000460378 FCGRTP55899 365 aa11.74□□□□□ -0.53
EPB41-208ENST00000460378 CXCL9Q07325 125 aa11.74□□□□□ -0.53
EPB41-208ENST00000460378 KCTD2Q14681 263 aa11.74□□□□□ -0.53
EPB41-208ENST00000460378 LPXNO60711 386 aa11.74□□□□□ -0.53
EPB41-208ENST00000460378 SLC9C1Q4G0N8 1177 aa11.74□□□□□ -0.53
EPB41-208ENST00000460378 CNPY2Q9Y2B0 182 aa11.74□□□□□ -0.53
EPB41-208ENST00000460378 FKBP1BP68106 108 aa11.73□□□□□ -0.53
EPB41-208ENST00000460378 PDGFDQ9GZP0 370 aaPredicted RBP11.73□□□□□ -0.53
EPB41-208ENST00000460378 BOLA2Q9H3K6 86 aa11.73□□□□□ -0.53
EPB41-208ENST00000460378 GOLIM4O00461 696 aa11.73□□□□□ -0.53
EPB41-208ENST00000460378 DPF2Q92785 391 aa11.73□□□□□ -0.53
EPB41-208ENST00000460378 CELF1Q92879 486 aaKnown RBP11.73□□□□□ -0.53
EPB41-208ENST00000460378 SAP30BPQ9UHR5 308 aaKnown RBP11.73□□□□□ -0.53
EPB41-208ENST00000460378 ADGRB1O14514 1584 aa11.73□□□□□ -0.53
EPB41-208ENST00000460378 CCDC69A6NI79 296 aa11.73□□□□□ -0.53
EPB41-208ENST00000460378 EPS15P42566 896 aa11.73□□□□□ -0.53
EPB41-208ENST00000460378 EP400NLQ6ZTU2 488 aa11.73□□□□□ -0.53
EPB41-208ENST00000460378 PROM2Q8N271 834 aa11.73□□□□□ -0.53
EPB41-208ENST00000460378 ZFYP08048 801 aaPredicted RBP11.73□□□□□ -0.53
EPB41-208ENST00000460378 CCDC34Q96HJ3 373 aa11.73□□□□□ -0.53
EPB41-208ENST00000460378 PPP2R3BQ9Y5P8 575 aa11.73□□□□□ -0.53
EPB41-208ENST00000460378 STX8Q9UNK0 236 aa11.72□□□□□ -0.53
EPB41-208ENST00000460378 SLC4A4Q9Y6R1 1079 aa11.72□□□□□ -0.53
EPB41-208ENST00000460378 HSPA1AP0DMV8 641 aaKnown RBP11.72□□□□□ -0.53
EPB41-208ENST00000460378 HSPA1BP0DMV9 641 aaKnown RBP11.72□□□□□ -0.53
EPB41-208ENST00000460378 PER1O15534 1290 aaPredicted RBP11.72□□□□□ -0.53
EPB41-208ENST00000460378 NCAPG2Q86XI2 1143 aa11.72□□□□□ -0.53
EPB41-208ENST00000460378 CD209Q9NNX6 404 aa11.72□□□□□ -0.53
EPB41-208ENST00000460378 RTN4Q9NQC3 1192 aaKnown RBP11.72□□□□□ -0.53
EPB41-208ENST00000460378 SHPRHQ149N8 1683 aa11.72□□□□□ -0.53
EPB41-208ENST00000460378 CRKP46108 304 aa11.72□□□□□ -0.53
EPB41-208ENST00000460378 IMMTQ16891 758 aaKnown RBP11.72□□□□□ -0.53
EPB41-208ENST00000460378 TNPO1Q92973 898 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms