RNA–Protein interactions for RNA: ENST00000458337.5

COMMD1-206, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-206ENST00000458337 ZBED3Q96IU2 234 aaPredicted RBP16.59■□□□□ 0.25
COMMD1-206ENST00000458337 SIL1Q9H173 461 aa16.59■□□□□ 0.25
COMMD1-206ENST00000458337 PNMA6EA0A0J9YXQ4 647 aa16.58■□□□□ 0.24
COMMD1-206ENST00000458337 ZBTB22O15209 634 aa16.58■□□□□ 0.24
COMMD1-206ENST00000458337 BCAMP50895 628 aa16.58■□□□□ 0.24
COMMD1-206ENST00000458337 KIAA0825Q8IV33 1275 aa16.58■□□□□ 0.24
COMMD1-206ENST00000458337 MTMR14Q8NCE2 650 aa16.58■□□□□ 0.24
COMMD1-206ENST00000458337 ASTN2O75129 1339 aaPredicted RBP16.58■□□□□ 0.24
COMMD1-206ENST00000458337 PITPNM2Q9BZ72 1349 aa16.57■□□□□ 0.24
COMMD1-206ENST00000458337 WNT10BO00744 389 aa16.57■□□□□ 0.24
COMMD1-206ENST00000458337 SLC5A1P13866 664 aa16.57■□□□□ 0.24
COMMD1-206ENST00000458337 POLA2Q14181 598 aa16.57■□□□□ 0.24
COMMD1-206ENST00000458337 NBPF9Q3BBW0 867 aa16.57■□□□□ 0.24
COMMD1-206ENST00000458337 KRT26Q7Z3Y9 468 aa16.57■□□□□ 0.24
COMMD1-206ENST00000458337 ITPRIPQ8IWB1 547 aa16.57■□□□□ 0.24
COMMD1-206ENST00000458337 PANK1Q8TE04 598 aa16.57■□□□□ 0.24
COMMD1-206ENST00000458337 SSH3Q8TE77 659 aa16.57■□□□□ 0.24
COMMD1-206ENST00000458337 HDAC9Q9UKV0 1011 aa16.57■□□□□ 0.24
COMMD1-206ENST00000458337 PCNTO95613 3336 aa16.57■□□□□ 0.24
COMMD1-206ENST00000458337 CNTNAP1P78357 1384 aa16.56■□□□□ 0.24
COMMD1-206ENST00000458337 RASSF10A6NK89 507 aa16.56■□□□□ 0.24
COMMD1-206ENST00000458337 ATP2B3Q16720 1220 aa16.56■□□□□ 0.24
COMMD1-206ENST00000458337 DEFB115Q30KQ5 88 aa16.56■□□□□ 0.24
COMMD1-206ENST00000458337 ANGEL2Q5VTE6 544 aaKnown RBP16.56■□□□□ 0.24
COMMD1-206ENST00000458337 VPS37DQ86XT2 251 aa16.56■□□□□ 0.24
COMMD1-206ENST00000458337 GGA3Q9NZ52 723 aa16.56■□□□□ 0.24
COMMD1-206ENST00000458337 CELF2O95319 508 aaKnown RBP16.55■□□□□ 0.24
COMMD1-206ENST00000458337 MFSD14BQ5SR56 506 aa16.55■□□□□ 0.24
COMMD1-206ENST00000458337 DLK2Q6UY11 383 aa16.55■□□□□ 0.24
COMMD1-206ENST00000458337 JAG2Q9Y219 1238 aa16.55■□□□□ 0.24
COMMD1-206ENST00000458337 SULF1Q8IWU6 871 aa16.54■□□□□ 0.24
COMMD1-206ENST00000458337 TBC1D22AQ8WUA7 517 aa16.54■□□□□ 0.24
COMMD1-206ENST00000458337 MRIQ9BWK5 157 aa16.54■□□□□ 0.24
COMMD1-206ENST00000458337 MKRN1Q9UHC7 482 aaKnown RBP16.54■□□□□ 0.24
COMMD1-206ENST00000458337 TLL2Q9Y6L7 1015 aa16.54■□□□□ 0.24
COMMD1-206ENST00000458337 ADM5C9JUS6 153 aa16.53■□□□□ 0.24
COMMD1-206ENST00000458337 TIMM10P62072 90 aa16.53■□□□□ 0.24
COMMD1-206ENST00000458337 TFCP2Q12800 502 aa16.53■□□□□ 0.24
COMMD1-206ENST00000458337 MVPQ14764 893 aaKnown RBP16.53■□□□□ 0.24
COMMD1-206ENST00000458337 DLGAP5Q15398 846 aa16.53■□□□□ 0.24
COMMD1-206ENST00000458337 SAPCD2Q86UD0 394 aa16.53■□□□□ 0.24
COMMD1-206ENST00000458337 HHIPL1Q96JK4 782 aa16.53■□□□□ 0.24
COMMD1-206ENST00000458337 SERPINA10Q9UK55 444 aa16.53■□□□□ 0.24
COMMD1-206ENST00000458337 IQSEC3Q9UPP2 1182 aaPredicted RBP16.53■□□□□ 0.24
COMMD1-206ENST00000458337 AKAP2Q9Y2D5 859 aa16.53■□□□□ 0.24
COMMD1-206ENST00000458337 NOP58Q9Y2X3 529 aaKnown RBP16.53■□□□□ 0.24
COMMD1-206ENST00000458337 FRAT2O75474 233 aaPredicted RBP16.52■□□□□ 0.24
COMMD1-206ENST00000458337 VEGFBP49765 207 aa16.52■□□□□ 0.24
COMMD1-206ENST00000458337 G3BP1Q13283 466 aaKnown RBP eCLIP16.52■□□□□ 0.24
COMMD1-206ENST00000458337 PDE3AQ14432 1141 aa16.52■□□□□ 0.24
COMMD1-206ENST00000458337 CFAP100Q494V2 611 aa16.52■□□□□ 0.24
COMMD1-206ENST00000458337 C1orf115Q9H7X2 142 aa16.52■□□□□ 0.24
COMMD1-206ENST00000458337 ABT1Q9ULW3 272 aaKnown RBP16.52■□□□□ 0.24
COMMD1-206ENST00000458337 SUGT1Q9Y2Z0 365 aa16.52■□□□□ 0.24
COMMD1-206ENST00000458337 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.52■□□□□ 0.24
COMMD1-206ENST00000458337 SPDYE2BA6NHP3 402 aa16.51■□□□□ 0.23
COMMD1-206ENST00000458337 F8W031 263 aaPredicted RBP16.51■□□□□ 0.23
COMMD1-206ENST00000458337 SPDYE6P0CI01 402 aa16.51■□□□□ 0.23
COMMD1-206ENST00000458337 HDLBPQ00341 1268 aaKnown RBP16.51■□□□□ 0.23
COMMD1-206ENST00000458337 GRIK5Q16478 980 aa16.51■□□□□ 0.23
COMMD1-206ENST00000458337 CDCA5Q96FF9 252 aa16.51■□□□□ 0.23
COMMD1-206ENST00000458337 PRMT6Q96LA8 375 aaPredicted RBP16.51■□□□□ 0.23
COMMD1-206ENST00000458337 ZBTB40Q9NUA8 1239 aa16.51■□□□□ 0.23
COMMD1-206ENST00000458337 DDX19BQ9UMR2 479 aa16.51■□□□□ 0.23
COMMD1-206ENST00000458337 TTF2Q9UNY4 1162 aaKnown RBP16.51■□□□□ 0.23
COMMD1-206ENST00000458337 A0A1B0GUL7 405 aa16.5■□□□□ 0.23
COMMD1-206ENST00000458337 SEMA3EO15041 775 aa16.5■□□□□ 0.23
COMMD1-206ENST00000458337 ADORA1P30542 326 aa16.5■□□□□ 0.23
COMMD1-206ENST00000458337 CHAF1AQ13111 956 aaPredicted RBP16.5■□□□□ 0.23
COMMD1-206ENST00000458337 CCDC102BQ68D86 513 aa16.5■□□□□ 0.23
COMMD1-206ENST00000458337 CEP85Q6P2H3 762 aa16.5■□□□□ 0.23
COMMD1-206ENST00000458337 WDR66Q8TBY9 1149 aa16.5■□□□□ 0.23
COMMD1-206ENST00000458337 GPR108Q9NPR9 543 aa16.5■□□□□ 0.23
COMMD1-206ENST00000458337 GNL3LQ9NVN8 582 aaKnown RBP16.5■□□□□ 0.23
COMMD1-206ENST00000458337 COG6Q9Y2V7 657 aa16.5■□□□□ 0.23
COMMD1-206ENST00000458337 PCDHAC2Q9Y5I4 1007 aa16.5■□□□□ 0.23
COMMD1-206ENST00000458337 PHKA1P46020 1223 aa16.49■□□□□ 0.23
COMMD1-206ENST00000458337 APOBEC3FQ8IUX4 373 aaKnown RBP16.49■□□□□ 0.23
COMMD1-206ENST00000458337 C2orf69Q8N8R5 385 aa16.49■□□□□ 0.23
COMMD1-206ENST00000458337 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.49■□□□□ 0.23
COMMD1-206ENST00000458337 XAGE2Q96GT9 111 aa16.49■□□□□ 0.23
COMMD1-206ENST00000458337 CHMP4BQ9H444 224 aaKnown RBP16.49■□□□□ 0.23
COMMD1-206ENST00000458337 ZNF408Q9H9D4 720 aa16.49■□□□□ 0.23
COMMD1-206ENST00000458337 GBA2Q9HCG7 927 aaPredicted RBP16.49■□□□□ 0.23
COMMD1-206ENST00000458337 WDR33Q9C0J8 1336 aaKnown RBP16.48■□□□□ 0.23
COMMD1-206ENST00000458337 SURF6O75683 361 aaKnown RBP16.48■□□□□ 0.23
COMMD1-206ENST00000458337 DENND2AQ9ULE3 1009 aa16.48■□□□□ 0.23
COMMD1-206ENST00000458337 SCAF8Q9UPN6 1271 aaKnown RBP16.48■□□□□ 0.23
COMMD1-206ENST00000458337 SALL1Q9NSC2 1324 aa16.47■□□□□ 0.23
COMMD1-206ENST00000458337 ECE1P42892 770 aa16.47■□□□□ 0.23
COMMD1-206ENST00000458337 CRKP46108 304 aa16.47■□□□□ 0.23
COMMD1-206ENST00000458337 FKBP1BP68106 108 aa16.47■□□□□ 0.23
COMMD1-206ENST00000458337 C20orf194Q5TEA3 1177 aa16.47■□□□□ 0.23
COMMD1-206ENST00000458337 RPAP2Q8IXW5 612 aaPredicted RBP16.47■□□□□ 0.23
COMMD1-206ENST00000458337 CAPNS2Q96L46 248 aa16.47■□□□□ 0.23
COMMD1-206ENST00000458337 ARAP2Q8WZ64 1704 aa16.47■□□□□ 0.23
COMMD1-206ENST00000458337 AOX1Q06278 1338 aa16.46■□□□□ 0.23
COMMD1-206ENST00000458337 PDS5AQ29RF7 1337 aaKnown RBP16.46■□□□□ 0.23
COMMD1-206ENST00000458337 MYO1BO43795 1136 aa16.46■□□□□ 0.23
COMMD1-206ENST00000458337 RBM5P52756 815 aaKnown RBP eCLIP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms