RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 MAPK8IP1Q9UQF2 711 aa22.25■■□□□ 1.15
SNX27-204ENST00000458013 NDC80O14777 642 aa22.25■■□□□ 1.15
SNX27-204ENST00000458013 IDI1Q13907 227 aa22.25■■□□□ 1.15
SNX27-204ENST00000458013 CFAP58Q5T655 872 aa22.25■■□□□ 1.15
SNX27-204ENST00000458013 PPP1R7Q15435 360 aa22.25■■□□□ 1.15
SNX27-204ENST00000458013 NSRP1Q9H0G5 558 aaKnown RBP22.25■■□□□ 1.15
SNX27-204ENST00000458013 PYM1Q9BRP8 204 aaKnown RBP22.25■■□□□ 1.15
SNX27-204ENST00000458013 A0A1B0GVL5 298 aa22.24■■□□□ 1.15
SNX27-204ENST00000458013 CCDC65Q8IXS2 484 aa22.24■■□□□ 1.15
SNX27-204ENST00000458013 KIF14Q15058 1648 aa22.24■■□□□ 1.15
SNX27-204ENST00000458013 PSMA7O14818 248 aa22.24■■□□□ 1.15
SNX27-204ENST00000458013 MAEAQ7L5Y9 396 aa22.24■■□□□ 1.15
SNX27-204ENST00000458013 NEK11Q8NG66 645 aa22.24■■□□□ 1.15
SNX27-204ENST00000458013 RRP36Q96EU6 259 aaKnown RBP22.24■■□□□ 1.15
SNX27-204ENST00000458013 PLEKHA4Q9H4M7 779 aa22.24■■□□□ 1.15
SNX27-204ENST00000458013 CCDC172P0C7W6 258 aa22.24■■□□□ 1.15
SNX27-204ENST00000458013 FAM200AQ8TCP9 573 aa22.24■■□□□ 1.15
SNX27-204ENST00000458013 PRIMPOLQ96LW4 560 aa22.24■■□□□ 1.15
SNX27-204ENST00000458013 GRM8O00222 908 aa22.23■■□□□ 1.15
SNX27-204ENST00000458013 CREB3L3Q68CJ9 461 aa22.23■■□□□ 1.15
SNX27-204ENST00000458013 PTPDC1A2A3K4 754 aa22.23■■□□□ 1.15
SNX27-204ENST00000458013 TSPYL6Q8N831 410 aa22.23■■□□□ 1.15
SNX27-204ENST00000458013 SEC62Q99442 399 aaKnown RBP22.23■■□□□ 1.15
SNX27-204ENST00000458013 VWA3AA6NCI4 1184 aa22.23■■□□□ 1.15
SNX27-204ENST00000458013 SEC24BO95487 1268 aa22.23■■□□□ 1.15
SNX27-204ENST00000458013 RASA3Q14644 834 aa22.23■■□□□ 1.15
SNX27-204ENST00000458013 TTC21BQ7Z4L5 1316 aa22.22■■□□□ 1.15
SNX27-204ENST00000458013 CCDC121Q6ZUS5 278 aa22.22■■□□□ 1.15
SNX27-204ENST00000458013 GPCPD1Q9NPB8 672 aa22.22■■□□□ 1.15
SNX27-204ENST00000458013 C17orf53Q8N3J3 647 aaPredicted RBP22.22■■□□□ 1.15
SNX27-204ENST00000458013 PPP1R21Q6ZMI0 780 aa22.22■■□□□ 1.15
SNX27-204ENST00000458013 ZCRB1Q8TBF4 217 aaKnown RBP22.22■■□□□ 1.15
SNX27-204ENST00000458013 SPATA24Q86W54 205 aa22.22■■□□□ 1.15
SNX27-204ENST00000458013 CC2D2AQ9P2K1 1620 aa22.22■■□□□ 1.15
SNX27-204ENST00000458013 SIRT1Q96EB6 747 aa22.21■■□□□ 1.15
SNX27-204ENST00000458013 SREK1Q8WXA9 508 aaKnown RBP22.21■■□□□ 1.15
SNX27-204ENST00000458013 CNNM2Q9H8M5 875 aa22.21■■□□□ 1.15
SNX27-204ENST00000458013 KIF5AQ12840 1032 aa22.21■■□□□ 1.15
SNX27-204ENST00000458013 C8orf34Q49A92 452 aa22.21■■□□□ 1.15
SNX27-204ENST00000458013 CCDC42Q96M95 316 aa22.21■■□□□ 1.15
SNX27-204ENST00000458013 BICC1Q9H694 974 aaKnown RBP22.21■■□□□ 1.15
SNX27-204ENST00000458013 SPDYE3A6NKU9 549 aa22.21■■□□□ 1.15
SNX27-204ENST00000458013 HPDP32754 393 aaPredicted RBP22.21■■□□□ 1.15
SNX27-204ENST00000458013 ZNF526Q8TF50 670 aaPredicted RBP22.21■■□□□ 1.15
SNX27-204ENST00000458013 C8orf37Q96NL8 207 aa22.21■■□□□ 1.15
SNX27-204ENST00000458013 ADGRL1O94910 1474 aa22.21■■□□□ 1.15
SNX27-204ENST00000458013 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.2■■□□□ 1.15
SNX27-204ENST00000458013 TPD52P55327 224 aaPredicted RBP22.2■■□□□ 1.14
SNX27-204ENST00000458013 NFATC2IPQ8NCF5 419 aa22.2■■□□□ 1.14
SNX27-204ENST00000458013 PLB1Q6P1J6 1458 aa22.2■■□□□ 1.14
SNX27-204ENST00000458013 SLU7O95391 586 aaKnown RBP22.2■■□□□ 1.14
SNX27-204ENST00000458013 C6orf50Q9HD87 102 aa22.2■■□□□ 1.14
SNX27-204ENST00000458013 CD109Q6YHK3 1445 aa22.2■■□□□ 1.14
SNX27-204ENST00000458013 OPA1O60313 960 aa22.2■■□□□ 1.14
SNX27-204ENST00000458013 TRIM75PA6NK02 468 aa22.19■■□□□ 1.14
SNX27-204ENST00000458013 RNF113AO15541 343 aaKnown RBP22.19■■□□□ 1.14
SNX27-204ENST00000458013 ZNF804AQ7Z570 1209 aa22.19■■□□□ 1.14
SNX27-204ENST00000458013 MAGI1Q96QZ7 1491 aaPredicted RBP22.19■■□□□ 1.14
SNX27-204ENST00000458013 DDX39AO00148 427 aaKnown RBP22.19■■□□□ 1.14
SNX27-204ENST00000458013 ATP8B2P98198 1209 aa22.19■■□□□ 1.14
SNX27-204ENST00000458013 DZIP3Q86Y13 1208 aaKnown RBP22.19■■□□□ 1.14
SNX27-204ENST00000458013 RAB3GAP1Q15042 981 aa22.19■■□□□ 1.14
SNX27-204ENST00000458013 MTHFSDQ2M296 383 aaKnown RBP22.19■■□□□ 1.14
SNX27-204ENST00000458013 RUFY3Q7L099 469 aa22.18■■□□□ 1.14
SNX27-204ENST00000458013 C10orf67Q8IYJ2 551 aa22.18■■□□□ 1.14
SNX27-204ENST00000458013 MPHOSPH6Q99547 160 aaKnown RBP22.18■■□□□ 1.14
SNX27-204ENST00000458013 SCAF11Q99590 1463 aaKnown RBP22.18■■□□□ 1.14
SNX27-204ENST00000458013 U2AF2P26368 475 aaKnown RBP eCLIP22.18■■□□□ 1.143e-9■■■■■ 28.8
SNX27-204ENST00000458013 TEX13AQ9BXU3 409 aaPredicted RBP22.18■■□□□ 1.14
SNX27-204ENST00000458013 VPS16Q9H269 839 aa22.18■■□□□ 1.14
SNX27-204ENST00000458013 ZYXQ15942 572 aaKnown RBP22.18■■□□□ 1.14
SNX27-204ENST00000458013 CPLX4Q7Z7G2 160 aa22.18■■□□□ 1.14
SNX27-204ENST00000458013 LETM2Q2VYF4 491 aa22.18■■□□□ 1.14
SNX27-204ENST00000458013 ANKS4BQ8N8V4 417 aa22.18■■□□□ 1.14
SNX27-204ENST00000458013 ATP6V0A2Q9Y487 856 aa22.18■■□□□ 1.14
SNX27-204ENST00000458013 NDUFB9Q9Y6M9 179 aa22.18■■□□□ 1.14
SNX27-204ENST00000458013 HDAC1Q13547 482 aaPredicted RBP22.17■■□□□ 1.14
SNX27-204ENST00000458013 IMPG2Q9BZV3 1241 aa22.17■■□□□ 1.14
SNX27-204ENST00000458013 TOPBP1Q92547 1522 aa22.17■■□□□ 1.14
SNX27-204ENST00000458013 MAP7D1Q3KQU3 841 aa22.17■■□□□ 1.14
SNX27-204ENST00000458013 KRT79Q5XKE5 535 aa22.17■■□□□ 1.14
SNX27-204ENST00000458013 TBC1D7Q9P0N9 293 aa22.17■■□□□ 1.14
SNX27-204ENST00000458013 SH3BP5O60239 455 aa22.17■■□□□ 1.14
SNX27-204ENST00000458013 MAK16Q9BXY0 300 aaKnown RBP22.17■■□□□ 1.14
SNX27-204ENST00000458013 PPIP5K1Q6PFW1 1433 aa22.17■■□□□ 1.14
SNX27-204ENST00000458013 IFT140Q96RY7 1462 aa22.17■■□□□ 1.14
SNX27-204ENST00000458013 RLBP1P12271 317 aa22.17■■□□□ 1.14
SNX27-204ENST00000458013 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.17■■□□□ 1.14
SNX27-204ENST00000458013 PPP2R5DQ14738 602 aa22.16■■□□□ 1.14
SNX27-204ENST00000458013 PLVAPQ9BX97 442 aa22.16■■□□□ 1.14
SNX27-204ENST00000458013 PRXQ9BXM0 1461 aa22.16■■□□□ 1.14
SNX27-204ENST00000458013 MSH6P52701 1360 aa22.16■■□□□ 1.14
SNX27-204ENST00000458013 NAA25Q14CX7 972 aa22.16■■□□□ 1.14
SNX27-204ENST00000458013 FNBP4Q8N3X1 1017 aaPredicted RBP22.16■■□□□ 1.14
SNX27-204ENST00000458013 NAP1L3Q99457 506 aaPredicted RBP22.16■■□□□ 1.14
SNX27-204ENST00000458013 KRT86O43790 486 aa22.16■■□□□ 1.14
SNX27-204ENST00000458013 HDAC9Q9UKV0 1011 aa22.16■■□□□ 1.14
SNX27-204ENST00000458013 CCNT1O60563 726 aaKnown RBP22.16■■□□□ 1.14
SNX27-204ENST00000458013 KRT83P78385 493 aa22.16■■□□□ 1.14
SNX27-204ENST00000458013 SMC6Q96SB8 1091 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms