RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 APBB1O00213 710 aa17.39■□□□□ 0.37
SMPD4-215ENST00000457039 CERS5Q8N5B7 392 aa17.39■□□□□ 0.37
SMPD4-215ENST00000457039 TLR7Q9NYK1 1049 aaKnown RBP17.39■□□□□ 0.37
SMPD4-215ENST00000457039 MYO3BQ8WXR4 1341 aa17.39■□□□□ 0.37
SMPD4-215ENST00000457039 SEMA3EO15041 775 aa17.38■□□□□ 0.37
SMPD4-215ENST00000457039 EPS15P42566 896 aa17.38■□□□□ 0.37
SMPD4-215ENST00000457039 CLASRPQ8N2M8 674 aaKnown RBP17.38■□□□□ 0.37
SMPD4-215ENST00000457039 FBXW7Q969H0 707 aa17.38■□□□□ 0.37
SMPD4-215ENST00000457039 LRRCC1Q9C099 1032 aa17.38■□□□□ 0.37
SMPD4-215ENST00000457039 CCDC8Q9H0W5 538 aaPredicted RBP17.38■□□□□ 0.37
SMPD4-215ENST00000457039 TAF1DQ9H5J8 278 aaPredicted RBP17.38■□□□□ 0.37
SMPD4-215ENST00000457039 GNL3LQ9NVN8 582 aaKnown RBP17.38■□□□□ 0.37
SMPD4-215ENST00000457039 HACL1Q9UJ83 578 aa17.38■□□□□ 0.37
SMPD4-215ENST00000457039 JAG2Q9Y219 1238 aa17.38■□□□□ 0.37
SMPD4-215ENST00000457039 SHTN1A0MZ66 631 aa17.37■□□□□ 0.37
SMPD4-215ENST00000457039 IGHDP01880 384 aa17.37■□□□□ 0.37
SMPD4-215ENST00000457039 ARID4AP29374 1257 aaPredicted RBP17.37■□□□□ 0.37
SMPD4-215ENST00000457039 LMOD1P29536 600 aaPredicted RBP17.37■□□□□ 0.37
SMPD4-215ENST00000457039 RASGRF1Q13972 1273 aa17.37■□□□□ 0.37
SMPD4-215ENST00000457039 AACSQ86V21 672 aa17.37■□□□□ 0.37
SMPD4-215ENST00000457039 RWDD1Q9H446 243 aaPredicted RBP17.37■□□□□ 0.37
SMPD4-215ENST00000457039 CNOT7Q9UIV1 285 aaKnown RBP17.37■□□□□ 0.37
SMPD4-215ENST00000457039 PDS5AQ29RF7 1337 aaKnown RBP17.37■□□□□ 0.37
SMPD4-215ENST00000457039 SMARCA5O60264 1052 aaPredicted RBP17.36■□□□□ 0.37
SMPD4-215ENST00000457039 EPHX2P34913 555 aa17.36■□□□□ 0.37
SMPD4-215ENST00000457039 ZNF280AP59817 542 aaPredicted RBP17.36■□□□□ 0.37
SMPD4-215ENST00000457039 CHAF1AQ13111 956 aaPredicted RBP17.36■□□□□ 0.37
SMPD4-215ENST00000457039 MICALL2Q8IY33 904 aa17.36■□□□□ 0.37
SMPD4-215ENST00000457039 GCC1Q96CN9 775 aa17.36■□□□□ 0.37
SMPD4-215ENST00000457039 ZNF512BQ96KM6 892 aaPredicted RBP17.36■□□□□ 0.37
SMPD4-215ENST00000457039 DENND2AQ9ULE3 1009 aa17.36■□□□□ 0.37
SMPD4-215ENST00000457039 FRAT2O75474 233 aaPredicted RBP17.35■□□□□ 0.37
SMPD4-215ENST00000457039 MFSD14BQ5SR56 506 aa17.35■□□□□ 0.37
SMPD4-215ENST00000457039 GORABQ5T7V8 394 aa17.35■□□□□ 0.37
SMPD4-215ENST00000457039 SMC5Q8IY18 1101 aa17.35■□□□□ 0.37
SMPD4-215ENST00000457039 ADAMTSL1Q8N6G6 1762 aa17.35■□□□□ 0.37
SMPD4-215ENST00000457039 MYH13Q9UKX3 1938 aa17.35■□□□□ 0.37
SMPD4-215ENST00000457039 USP17L8P0C7I0 530 aa17.34■□□□□ 0.37
SMPD4-215ENST00000457039 UQCRFS1P1P0C7P4 283 aa17.34■□□□□ 0.37
SMPD4-215ENST00000457039 MCAMP43121 646 aa17.34■□□□□ 0.37
SMPD4-215ENST00000457039 SCARF1Q14162 830 aa17.34■□□□□ 0.37
SMPD4-215ENST00000457039 GRIK5Q16478 980 aa17.34■□□□□ 0.37
SMPD4-215ENST00000457039 CCDC158Q5M9N0 1113 aa17.34■□□□□ 0.37
SMPD4-215ENST00000457039 WDR66Q8TBY9 1149 aa17.34■□□□□ 0.37
SMPD4-215ENST00000457039 TBC1D22AQ8WUA7 517 aa17.34■□□□□ 0.37
SMPD4-215ENST00000457039 ADARB2Q9NS39 739 aaKnown RBP17.34■□□□□ 0.37
SMPD4-215ENST00000457039 SALL1Q9NSC2 1324 aa17.34■□□□□ 0.37
SMPD4-215ENST00000457039 HMG20BQ9P0W2 317 aa17.34■□□□□ 0.37
SMPD4-215ENST00000457039 H7C1D1 291 aa17.33■□□□□ 0.36
SMPD4-215ENST00000457039 EGFRP00533 1210 aa17.33■□□□□ 0.36
SMPD4-215ENST00000457039 IFIT2P09913 472 aaKnown RBP17.33■□□□□ 0.36
SMPD4-215ENST00000457039 MMP14P50281 582 aa17.33■□□□□ 0.36
SMPD4-215ENST00000457039 TTC39AQ5SRH9 613 aa17.33■□□□□ 0.36
SMPD4-215ENST00000457039 KIAA0825Q8IV33 1275 aa17.33■□□□□ 0.36
SMPD4-215ENST00000457039 POTEIP0CG38 1075 aa17.32■□□□□ 0.36
SMPD4-215ENST00000457039 POTEJP0CG39 1038 aa17.32■□□□□ 0.36
SMPD4-215ENST00000457039 HIRAP54198 1017 aaPredicted RBP17.32■□□□□ 0.36
SMPD4-215ENST00000457039 PI16Q6UXB8 463 aa17.32■□□□□ 0.36
SMPD4-215ENST00000457039 USP50Q70EL3 339 aaPredicted RBP17.32■□□□□ 0.36
SMPD4-215ENST00000457039 SAMD7Q7Z3H4 446 aa17.32■□□□□ 0.36
SMPD4-215ENST00000457039 PNMA8AQ86V59 439 aaPredicted RBP17.32■□□□□ 0.36
SMPD4-215ENST00000457039 SPATA5Q8NB90 893 aa17.32■□□□□ 0.36
SMPD4-215ENST00000457039 TRPM4Q8TD43 1214 aa17.32■□□□□ 0.36
SMPD4-215ENST00000457039 SUGT1Q9Y2Z0 365 aa17.32■□□□□ 0.36
SMPD4-215ENST00000457039 AKAP11Q9UKA4 1901 aa17.31■□□□□ 0.36
SMPD4-215ENST00000457039 F8W031 263 aaPredicted RBP17.3■□□□□ 0.36
SMPD4-215ENST00000457039 TOMM70O94826 608 aa17.3■□□□□ 0.36
SMPD4-215ENST00000457039 KIF4BQ2VIQ3 1234 aa17.3■□□□□ 0.36
SMPD4-215ENST00000457039 TBC1D10BQ4KMP7 808 aaPredicted RBP17.3■□□□□ 0.36
SMPD4-215ENST00000457039 OGFOD1Q8N543 542 aa17.3■□□□□ 0.36
SMPD4-215ENST00000457039 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.3■□□□□ 0.36
SMPD4-215ENST00000457039 ZBED3Q96IU2 234 aaPredicted RBP17.3■□□□□ 0.36
SMPD4-215ENST00000457039 MYOZ2Q9NPC6 264 aa17.3■□□□□ 0.36
SMPD4-215ENST00000457039 HDAC9Q9UKV0 1011 aa17.3■□□□□ 0.36
SMPD4-215ENST00000457039 TTF2Q9UNY4 1162 aaKnown RBP17.3■□□□□ 0.36
SMPD4-215ENST00000457039 SALL3Q9BXA9 1300 aa17.29■□□□□ 0.36
SMPD4-215ENST00000457039 EAPPQ56P03 285 aaPredicted RBP17.29■□□□□ 0.36
SMPD4-215ENST00000457039 ANKRD45Q5TZF3 282 aa17.29■□□□□ 0.36
SMPD4-215ENST00000457039 LDHDQ86WU2 507 aa17.29■□□□□ 0.36
SMPD4-215ENST00000457039 MTMR14Q8NCE2 650 aa17.29■□□□□ 0.36
SMPD4-215ENST00000457039 RBM46Q8TBY0 533 aaKnown RBP17.29■□□□□ 0.36
SMPD4-215ENST00000457039 BCL11AQ9H165 835 aa17.29■□□□□ 0.36
SMPD4-215ENST00000457039 PGAP2Q9UHJ9 254 aa17.29■□□□□ 0.36
SMPD4-215ENST00000457039 CYP2E1P05181 493 aaPredicted RBP17.28■□□□□ 0.36
SMPD4-215ENST00000457039 PRDX5P30044 214 aa17.28■□□□□ 0.36
SMPD4-215ENST00000457039 C16orf71Q8IYS4 520 aaPredicted RBP17.28■□□□□ 0.36
SMPD4-215ENST00000457039 ZGPATQ8N5A5 531 aaKnown RBP17.28■□□□□ 0.36
SMPD4-215ENST00000457039 SNRKQ9NRH2 765 aa17.28■□□□□ 0.36
SMPD4-215ENST00000457039 NEFLP07196 543 aa17.27■□□□□ 0.36
SMPD4-215ENST00000457039 ATP5JP18859 108 aa17.27■□□□□ 0.36
SMPD4-215ENST00000457039 ZAP70P43403 619 aa17.27■□□□□ 0.36
SMPD4-215ENST00000457039 HDLBPQ00341 1268 aaKnown RBP17.27■□□□□ 0.36
SMPD4-215ENST00000457039 NUCB1Q02818 461 aa17.27■□□□□ 0.36
SMPD4-215ENST00000457039 RBM26Q5T8P6 1007 aaKnown RBP17.27■□□□□ 0.36
SMPD4-215ENST00000457039 TBC1D9Q6ZT07 1266 aa17.27■□□□□ 0.36
SMPD4-215ENST00000457039 OTUD7AQ8TE49 926 aaPredicted RBP17.27■□□□□ 0.36
SMPD4-215ENST00000457039 ZC3H15Q8WU90 426 aaKnown RBP17.27■□□□□ 0.36
SMPD4-215ENST00000457039 MRIQ9BWK5 157 aa17.27■□□□□ 0.36
SMPD4-215ENST00000457039 ECHDC1Q9NTX5 307 aa17.27■□□□□ 0.36
SMPD4-215ENST00000457039 SERPINA10Q9UK55 444 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms