RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 VIL1P09327 827 aaKnown RBP12.44□□□□□ -0.42
ATG4A-206ENST00000457035 IFIT1P09914 478 aaKnown RBP12.44□□□□□ -0.42
ATG4A-206ENST00000457035 VEGFAP15692 232 aaPredicted RBP12.44□□□□□ -0.42
ATG4A-206ENST00000457035 HIBADHP31937 336 aaKnown RBP12.44□□□□□ -0.42
ATG4A-206ENST00000457035 GYG1P46976 350 aa12.44□□□□□ -0.42
ATG4A-206ENST00000457035 BCAMP50895 628 aa12.44□□□□□ -0.42
ATG4A-206ENST00000457035 NUBP1P53384 320 aa12.44□□□□□ -0.42
ATG4A-206ENST00000457035 TIMM10P62072 90 aa12.44□□□□□ -0.42
ATG4A-206ENST00000457035 TNIP1Q15025 636 aa12.44□□□□□ -0.42
ATG4A-206ENST00000457035 EXOC6Q8TAG9 804 aa12.44□□□□□ -0.42
ATG4A-206ENST00000457035 GJA3Q9Y6H8 435 aa12.44□□□□□ -0.42
ATG4A-206ENST00000457035 ZNF646O15015 1829 aaPredicted RBP12.44□□□□□ -0.42
ATG4A-206ENST00000457035 POLR2AP24928 1970 aaKnown RBP12.43□□□□□ -0.42
ATG4A-206ENST00000457035 SLC5A1P13866 664 aa12.43□□□□□ -0.42
ATG4A-206ENST00000457035 AAMPQ13685 434 aa12.43□□□□□ -0.42
ATG4A-206ENST00000457035 ATP2B3Q16720 1220 aa12.43□□□□□ -0.42
ATG4A-206ENST00000457035 ZNF804AQ7Z570 1209 aa12.43□□□□□ -0.42
ATG4A-206ENST00000457035 TDRD7Q8NHU6 1098 aaKnown RBP12.43□□□□□ -0.42
ATG4A-206ENST00000457035 PHF12Q96QT6 1004 aa12.43□□□□□ -0.42
ATG4A-206ENST00000457035 GPR108Q9NPR9 543 aa12.43□□□□□ -0.42
ATG4A-206ENST00000457035 EXOC6BQ9Y2D4 811 aa12.43□□□□□ -0.42
ATG4A-206ENST00000457035 AKAP2Q9Y2D5 859 aa12.43□□□□□ -0.42
ATG4A-206ENST00000457035 USP17L3A6NCW0 530 aa12.42□□□□□ -0.42
ATG4A-206ENST00000457035 USP17L4A6NCW7 530 aa12.42□□□□□ -0.42
ATG4A-206ENST00000457035 SCNN1DP51172 638 aa12.42□□□□□ -0.42
ATG4A-206ENST00000457035 CAVIN4Q5BKX8 364 aa12.42□□□□□ -0.42
ATG4A-206ENST00000457035 STRIP1Q5VSL9 837 aa12.42□□□□□ -0.42
ATG4A-206ENST00000457035 TTLL5Q6EMB2 1281 aa12.42□□□□□ -0.42
ATG4A-206ENST00000457035 USP17L1Q7RTZ2 530 aa12.42□□□□□ -0.42
ATG4A-206ENST00000457035 GMLQ99445 158 aa12.42□□□□□ -0.42
ATG4A-206ENST00000457035 DCTPP1Q9H773 170 aa12.42□□□□□ -0.42
ATG4A-206ENST00000457035 MYH13Q9UKX3 1938 aa12.41□□□□□ -0.42
ATG4A-206ENST00000457035 A0A1B0GUL7 405 aa12.41□□□□□ -0.42
ATG4A-206ENST00000457035 ADORA1P30542 326 aa12.41□□□□□ -0.42
ATG4A-206ENST00000457035 GMPSP49915 693 aaPredicted RBP12.41□□□□□ -0.42
ATG4A-206ENST00000457035 GTF2IP78347 998 aa12.41□□□□□ -0.42
ATG4A-206ENST00000457035 OS9Q13438 667 aaPredicted RBP12.41□□□□□ -0.42
ATG4A-206ENST00000457035 HSP90AB4PQ58FF6 505 aa12.41□□□□□ -0.42
ATG4A-206ENST00000457035 DACT2Q5SW24 774 aa12.41□□□□□ -0.42
ATG4A-206ENST00000457035 DPF2Q92785 391 aa12.41□□□□□ -0.42
ATG4A-206ENST00000457035 XAGE2Q96GT9 111 aa12.41□□□□□ -0.42
ATG4A-206ENST00000457035 FAM205AQ6ZU69 1335 aa12.4□□□□□ -0.42
ATG4A-206ENST00000457035 RAB11FIP3O75154 756 aa12.4□□□□□ -0.42
ATG4A-206ENST00000457035 EPS15P42566 896 aa12.4□□□□□ -0.42
ATG4A-206ENST00000457035 IRX6P78412 446 aaPredicted RBP12.4□□□□□ -0.42
ATG4A-206ENST00000457035 TNNI3KQ59H18 835 aa12.4□□□□□ -0.42
ATG4A-206ENST00000457035 RSBN1LQ6PCB5 846 aaPredicted RBP12.4□□□□□ -0.42
ATG4A-206ENST00000457035 VPS37DQ86XT2 251 aa12.4□□□□□ -0.42
ATG4A-206ENST00000457035 ERC1Q8IUD2 1116 aa12.4□□□□□ -0.42
ATG4A-206ENST00000457035 JMYQ8N9B5 988 aa12.4□□□□□ -0.42
ATG4A-206ENST00000457035 AGBL3Q8NEM8 1001 aa12.4□□□□□ -0.42
ATG4A-206ENST00000457035 RHPN1Q8TCX5 695 aa12.4□□□□□ -0.42
ATG4A-206ENST00000457035 EAF2Q96CJ1 260 aaPredicted RBP12.4□□□□□ -0.42
ATG4A-206ENST00000457035 NEUROD6Q96NK8 337 aa12.4□□□□□ -0.42
ATG4A-206ENST00000457035 MXD3Q9BW11 206 aa12.4□□□□□ -0.42
ATG4A-206ENST00000457035 GPRC5DQ9NZD1 345 aa12.4□□□□□ -0.42
ATG4A-206ENST00000457035 CNOT7Q9UIV1 285 aaKnown RBP12.4□□□□□ -0.42
ATG4A-206ENST00000457035 FPGT-TNNI3KV9GXZ4 949 aa12.4□□□□□ -0.42
ATG4A-206ENST00000457035 ARAP2Q8WZ64 1704 aa12.4□□□□□ -0.43
ATG4A-206ENST00000457035 SHTN1A0MZ66 631 aa12.39□□□□□ -0.43
ATG4A-206ENST00000457035 IQCA1LA6NCM1 817 aa12.39□□□□□ -0.43
ATG4A-206ENST00000457035 RPS12P25398 132 aaKnown RBP12.39□□□□□ -0.43
ATG4A-206ENST00000457035 PHKA1P46020 1223 aa12.39□□□□□ -0.43
ATG4A-206ENST00000457035 CCDC102BQ68D86 513 aa12.39□□□□□ -0.43
ATG4A-206ENST00000457035 TAF1DQ9H5J8 278 aaPredicted RBP12.39□□□□□ -0.43
ATG4A-206ENST00000457035 HACL1Q9UJ83 578 aa12.39□□□□□ -0.43
ATG4A-206ENST00000457035 IQSEC3Q9UPP2 1182 aaPredicted RBP12.39□□□□□ -0.43
ATG4A-206ENST00000457035 AKAP11Q9UKA4 1901 aa12.39□□□□□ -0.43
ATG4A-206ENST00000457035 ZNF609O15014 1411 aa12.38□□□□□ -0.43
ATG4A-206ENST00000457035 EPHX2P34913 555 aa12.38□□□□□ -0.43
ATG4A-206ENST00000457035 FKBP1AP62942 108 aaKnown RBP12.38□□□□□ -0.43
ATG4A-206ENST00000457035 HDAC1Q13547 482 aaPredicted RBP12.38□□□□□ -0.43
ATG4A-206ENST00000457035 CERS5Q8N5B7 392 aa12.38□□□□□ -0.43
ATG4A-206ENST00000457035 KIF1BPQ96EK5 621 aa12.38□□□□□ -0.43
ATG4A-206ENST00000457035 JAG2Q9Y219 1238 aa12.38□□□□□ -0.43
ATG4A-206ENST00000457035 APBB1O00213 710 aa12.37□□□□□ -0.43
ATG4A-206ENST00000457035 LMOD1P29536 600 aaPredicted RBP12.37□□□□□ -0.43
ATG4A-206ENST00000457035 COL13A1Q5TAT6 717 aaPredicted RBP12.37□□□□□ -0.43
ATG4A-206ENST00000457035 MICALL2Q8IY33 904 aa12.37□□□□□ -0.43
ATG4A-206ENST00000457035 FBXW7Q969H0 707 aa12.37□□□□□ -0.43
ATG4A-206ENST00000457035 DBNDD2Q9BQY9 259 aa12.37□□□□□ -0.43
ATG4A-206ENST00000457035 CCDC8Q9H0W5 538 aaPredicted RBP12.37□□□□□ -0.43
ATG4A-206ENST00000457035 IL1RAPL2Q9NP60 686 aa12.37□□□□□ -0.43
ATG4A-206ENST00000457035 GNL3LQ9NVN8 582 aaKnown RBP12.37□□□□□ -0.43
ATG4A-206ENST00000457035 H7C1D1 291 aa12.36□□□□□ -0.43
ATG4A-206ENST00000457035 GALR2O43603 387 aaPredicted RBP12.36□□□□□ -0.43
ATG4A-206ENST00000457035 FRAT2O75474 233 aaPredicted RBP12.36□□□□□ -0.43
ATG4A-206ENST00000457035 USP17L8P0C7I0 530 aa12.36□□□□□ -0.43
ATG4A-206ENST00000457035 POTEIP0CG38 1075 aa12.36□□□□□ -0.43
ATG4A-206ENST00000457035 POTEJP0CG39 1038 aa12.36□□□□□ -0.43
ATG4A-206ENST00000457035 HIRAP54198 1017 aaPredicted RBP12.36□□□□□ -0.43
ATG4A-206ENST00000457035 ZNF280AP59817 542 aaPredicted RBP12.36□□□□□ -0.43
ATG4A-206ENST00000457035 CLASRPQ8N2M8 674 aaKnown RBP12.36□□□□□ -0.43
ATG4A-206ENST00000457035 ADARB2Q9NS39 739 aaKnown RBP12.36□□□□□ -0.43
ATG4A-206ENST00000457035 DBNLQ9UJU6 430 aaKnown RBP12.36□□□□□ -0.43
ATG4A-206ENST00000457035 MYO5AQ9Y4I1 1855 aaKnown RBP12.36□□□□□ -0.43
ATG4A-206ENST00000457035 MYO3BQ8WXR4 1341 aa12.36□□□□□ -0.43
ATG4A-206ENST00000457035 SEMA3EO15041 775 aa12.35□□□□□ -0.43
ATG4A-206ENST00000457035 SMARCA5O60264 1052 aaPredicted RBP12.35□□□□□ -0.43
ATG4A-206ENST00000457035 EGFRP00533 1210 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms