RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 PDE8BO95263 885 aa22.34■■□□□ 1.17
MSH6-207ENST00000456246 NOGQ13253 232 aa22.34■■□□□ 1.17
MSH6-207ENST00000456246 LRRC24Q50LG9 513 aa22.34■■□□□ 1.17
MSH6-207ENST00000456246 CAVIN4Q5BKX8 364 aa22.34■■□□□ 1.17
MSH6-207ENST00000456246 INTS3Q68E01 1043 aaKnown RBP22.34■■□□□ 1.17
MSH6-207ENST00000456246 APOBEC3FQ8IUX4 373 aaKnown RBP22.34■■□□□ 1.17
MSH6-207ENST00000456246 MTMR14Q8NCE2 650 aa22.34■■□□□ 1.17
MSH6-207ENST00000456246 TDRD7Q8NHU6 1098 aaKnown RBP22.34■■□□□ 1.17
MSH6-207ENST00000456246 PRDM10Q9NQV6 1147 aa22.34■■□□□ 1.17
MSH6-207ENST00000456246 DLGAP5Q15398 846 aa22.33■■□□□ 1.17
MSH6-207ENST00000456246 DLK2Q6UY11 383 aa22.33■■□□□ 1.17
MSH6-207ENST00000456246 VPS37DQ86XT2 251 aa22.33■■□□□ 1.17
MSH6-207ENST00000456246 CERS5Q8N5B7 392 aa22.33■■□□□ 1.17
MSH6-207ENST00000456246 VGLL2Q8N8G2 317 aa22.33■■□□□ 1.17
MSH6-207ENST00000456246 ZBED3Q96IU2 234 aaPredicted RBP22.33■■□□□ 1.17
MSH6-207ENST00000456246 FAM84BQ96KN1 310 aaPredicted RBP22.33■■□□□ 1.17
MSH6-207ENST00000456246 PAPPA2Q9BXP8 1791 aa22.33■■□□□ 1.16
MSH6-207ENST00000456246 EYA2O00167 538 aa22.32■■□□□ 1.16
MSH6-207ENST00000456246 GNAI3P08754 354 aa22.32■■□□□ 1.16
MSH6-207ENST00000456246 GYG1P46976 350 aa22.32■■□□□ 1.16
MSH6-207ENST00000456246 RFX5P48382 616 aaPredicted RBP22.32■■□□□ 1.16
MSH6-207ENST00000456246 PUM3Q15397 648 aaKnown RBP22.32■■□□□ 1.16
MSH6-207ENST00000456246 RGMBQ6NW40 437 aa22.32■■□□□ 1.16
MSH6-207ENST00000456246 CCDC102AQ96A19 550 aa22.32■■□□□ 1.16
MSH6-207ENST00000456246 COL1A1P02452 1464 aaPredicted RBP22.32■■□□□ 1.16
MSH6-207ENST00000456246 CA12O43570 354 aa22.31■■□□□ 1.16
MSH6-207ENST00000456246 NF2P35240 595 aa22.31■■□□□ 1.16
MSH6-207ENST00000456246 PTPN12Q05209 780 aaKnown RBP22.31■■□□□ 1.16
MSH6-207ENST00000456246 KLHDC4Q8TBB5 520 aa22.31■■□□□ 1.16
MSH6-207ENST00000456246 MYO1BO43795 1136 aa22.3■■□□□ 1.16
MSH6-207ENST00000456246 AOC2O75106 756 aa22.3■■□□□ 1.16
MSH6-207ENST00000456246 CIAO1O76071 339 aa22.3■■□□□ 1.16
MSH6-207ENST00000456246 IFIT1P09914 478 aaKnown RBP22.3■■□□□ 1.16
MSH6-207ENST00000456246 ATF7IPQ6VMQ6 1270 aa22.3■■□□□ 1.16
MSH6-207ENST00000456246 FBXO33Q7Z6M2 555 aa22.3■■□□□ 1.16
MSH6-207ENST00000456246 TNS4Q8IZW8 715 aa22.3■■□□□ 1.16
MSH6-207ENST00000456246 ARAP2Q8WZ64 1704 aa22.3■■□□□ 1.16
MSH6-207ENST00000456246 ECM29Q5VYK3 1845 aa22.29■■□□□ 1.16
MSH6-207ENST00000456246 MFSD14BQ5SR56 506 aa22.29■■□□□ 1.16
MSH6-207ENST00000456246 TBC1D22AQ8WUA7 517 aa22.29■■□□□ 1.16
MSH6-207ENST00000456246 LRRFIP2Q9Y608 721 aaKnown RBP22.29■■□□□ 1.16
MSH6-207ENST00000456246 ZNF157P51786 506 aaPredicted RBP22.28■■□□□ 1.16
MSH6-207ENST00000456246 MEIS3Q99687 375 aa22.28■■□□□ 1.16
MSH6-207ENST00000456246 PPP2R3BQ9Y5P8 575 aa22.28■■□□□ 1.16
MSH6-207ENST00000456246 ZBED9Q6R2W3 1325 aa22.28■■□□□ 1.16
MSH6-207ENST00000456246 SPDYE2BA6NHP3 402 aa22.27■■□□□ 1.16
MSH6-207ENST00000456246 F8W031 263 aaPredicted RBP22.27■■□□□ 1.16
MSH6-207ENST00000456246 FRAT2O75474 233 aaPredicted RBP22.27■■□□□ 1.16
MSH6-207ENST00000456246 SPDYE6P0CI01 402 aa22.27■■□□□ 1.16
MSH6-207ENST00000456246 HSPA8P11142 646 aaKnown RBP22.27■■□□□ 1.16
MSH6-207ENST00000456246 SLC5A1P13866 664 aa22.27■■□□□ 1.16
MSH6-207ENST00000456246 TRIM27P14373 513 aa22.27■■□□□ 1.16
MSH6-207ENST00000456246 FGFR2P21802 821 aa22.27■■□□□ 1.16
MSH6-207ENST00000456246 CFAP100Q494V2 611 aa22.27■■□□□ 1.16
MSH6-207ENST00000456246 LPIN2Q92539 896 aa22.27■■□□□ 1.16
MSH6-207ENST00000456246 JAG2Q9Y219 1238 aa22.27■■□□□ 1.16
MSH6-207ENST00000456246 BCAR3O75815 825 aa22.26■■□□□ 1.15
MSH6-207ENST00000456246 LBX1P52954 281 aa22.26■■□□□ 1.15
MSH6-207ENST00000456246 FRAT1Q92837 279 aaPredicted RBP22.26■■□□□ 1.15
MSH6-207ENST00000456246 SERPINA10Q9UK55 444 aa22.26■■□□□ 1.15
MSH6-207ENST00000456246 FAM155AB1AL88 458 aaPredicted RBP22.25■■□□□ 1.15
MSH6-207ENST00000456246 SLC10A3P09131 477 aa22.25■■□□□ 1.15
MSH6-207ENST00000456246 IL15P40933 162 aaPredicted RBP22.25■■□□□ 1.15
MSH6-207ENST00000456246 ATG9AQ7Z3C6 839 aa22.25■■□□□ 1.15
MSH6-207ENST00000456246 COPRSQ9NQ92 184 aa22.25■■□□□ 1.15
MSH6-207ENST00000456246 CEP126Q9P2H0 1117 aa22.25■■□□□ 1.15
MSH6-207ENST00000456246 TTF2Q9UNY4 1162 aaKnown RBP22.25■■□□□ 1.15
MSH6-207ENST00000456246 RBM5P52756 815 aaKnown RBP eCLIP22.24■■□□□ 1.15
MSH6-207ENST00000456246 MTX1Q13505 466 aa22.24■■□□□ 1.15
MSH6-207ENST00000456246 ZKSCAN2Q63HK3 967 aa22.24■■□□□ 1.15
MSH6-207ENST00000456246 REM2Q8IYK8 340 aaPredicted RBP22.24■■□□□ 1.15
MSH6-207ENST00000456246 DEFB129Q9H1M3 183 aa22.24■■□□□ 1.15
MSH6-207ENST00000456246 SUGT1Q9Y2Z0 365 aa22.24■■□□□ 1.15
MSH6-207ENST00000456246 HDLBPQ00341 1268 aaKnown RBP22.23■■□□□ 1.15
MSH6-207ENST00000456246 TTLL12Q14166 644 aaPredicted RBP22.23■■□□□ 1.15
MSH6-207ENST00000456246 ARMC9Q7Z3E5 817 aa22.23■■□□□ 1.15
MSH6-207ENST00000456246 SIL1Q9H173 461 aa22.23■■□□□ 1.15
MSH6-207ENST00000456246 SCAF8Q9UPN6 1271 aaKnown RBP22.23■■□□□ 1.15
MSH6-207ENST00000456246 BCAMP50895 628 aa22.22■■□□□ 1.15
MSH6-207ENST00000456246 CHAF1AQ13111 956 aaPredicted RBP22.22■■□□□ 1.15
MSH6-207ENST00000456246 TNFAIP1Q13829 316 aa22.22■■□□□ 1.15
MSH6-207ENST00000456246 PRAMEF18Q5VWM3 479 aa22.22■■□□□ 1.15
MSH6-207ENST00000456246 PRMT6Q96LA8 375 aaPredicted RBP22.22■■□□□ 1.15
MSH6-207ENST00000456246 MAST3O60307 1309 aa22.22■■□□□ 1.15
MSH6-207ENST00000456246 GNAI2P04899 355 aa22.21■■□□□ 1.15
MSH6-207ENST00000456246 ATP2B3Q16720 1220 aa22.21■■□□□ 1.15
MSH6-207ENST00000456246 RASAL3Q86YV0 1011 aa22.21■■□□□ 1.15
MSH6-207ENST00000456246 IQSEC3Q9UPP2 1182 aaPredicted RBP22.21■■□□□ 1.15
MSH6-207ENST00000456246 SRGAP3O43295 1099 aa22.2■■□□□ 1.14
MSH6-207ENST00000456246 CRKP46108 304 aa22.2■■□□□ 1.14
MSH6-207ENST00000456246 KIF23Q02241 960 aaPredicted RBP22.2■■□□□ 1.14
MSH6-207ENST00000456246 WDR66Q8TBY9 1149 aa22.2■■□□□ 1.14
MSH6-207ENST00000456246 CLUAP1Q96AJ1 413 aa22.2■■□□□ 1.14
MSH6-207ENST00000456246 VEZTQ9HBM0 779 aa22.2■■□□□ 1.14
MSH6-207ENST00000456246 GNL3LQ9NVN8 582 aaKnown RBP22.2■■□□□ 1.14
MSH6-207ENST00000456246 MYH13Q9UKX3 1938 aa22.19■■□□□ 1.14
MSH6-207ENST00000456246 CLRN2A0PK11 232 aa22.19■■□□□ 1.14
MSH6-207ENST00000456246 ZBTB22O15209 634 aa22.19■■□□□ 1.14
MSH6-207ENST00000456246 SUPT20HL1Q3ZLR7 823 aa22.19■■□□□ 1.14
MSH6-207ENST00000456246 SPDYE2Q495Y8 402 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms