RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 CNNM1Q9NRU3 951 aa16.34■□□□□ 0.21
TREX1-203ENST00000456089 RNF186Q9NXI6 227 aa16.34■□□□□ 0.21
TREX1-203ENST00000456089 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.34■□□□□ 0.21
TREX1-203ENST00000456089 ARAP2Q8WZ64 1704 aa16.33■□□□□ 0.21
TREX1-203ENST00000456089 ALDH1L1O75891 902 aa16.33■□□□□ 0.2
TREX1-203ENST00000456089 NBPF7P0C2Y1 421 aaPredicted RBP16.33■□□□□ 0.2
TREX1-203ENST00000456089 DGKZQ13574 1117 aa16.33■□□□□ 0.2
TREX1-203ENST00000456089 AOX1Q06278 1338 aa16.33■□□□□ 0.2
TREX1-203ENST00000456089 ZNF804AQ7Z570 1209 aa16.32■□□□□ 0.2
TREX1-203ENST00000456089 MRPL50Q8N5N7 158 aaKnown RBP16.32■□□□□ 0.2
TREX1-203ENST00000456089 ZBED3Q96IU2 234 aaPredicted RBP16.32■□□□□ 0.2
TREX1-203ENST00000456089 HDAC9Q9UKV0 1011 aa16.32■□□□□ 0.2
TREX1-203ENST00000456089 FKBP1BP68106 108 aa16.31■□□□□ 0.2
TREX1-203ENST00000456089 C15orf52Q6ZUT6 534 aaKnown RBP16.31■□□□□ 0.2
TREX1-203ENST00000456089 CDCA7LQ96GN5 454 aa16.31■□□□□ 0.2
TREX1-203ENST00000456089 MYH13Q9UKX3 1938 aa16.3■□□□□ 0.2
TREX1-203ENST00000456089 CLRN2A0PK11 232 aa16.3■□□□□ 0.2
TREX1-203ENST00000456089 IL1R1P14778 569 aa16.3■□□□□ 0.2
TREX1-203ENST00000456089 GYG1P46976 350 aa16.3■□□□□ 0.2
TREX1-203ENST00000456089 DLGAP5Q15398 846 aa16.3■□□□□ 0.2
TREX1-203ENST00000456089 BICC1Q9H694 974 aaKnown RBP16.3■□□□□ 0.2
TREX1-203ENST00000456089 PTPN12Q05209 780 aaKnown RBP16.29■□□□□ 0.2
TREX1-203ENST00000456089 CFAP100Q494V2 611 aa16.29■□□□□ 0.2
TREX1-203ENST00000456089 APOBEC3FQ8IUX4 373 aaKnown RBP16.29■□□□□ 0.2
TREX1-203ENST00000456089 SSH1Q8WYL5 1049 aa16.29■□□□□ 0.2
TREX1-203ENST00000456089 SAGE1Q9NXZ1 904 aa16.29■□□□□ 0.2
TREX1-203ENST00000456089 OTOFQ9HC10 1997 aa16.29■□□□□ 0.2
TREX1-203ENST00000456089 NF2P35240 595 aa16.28■□□□□ 0.2
TREX1-203ENST00000456089 LRRC24Q50LG9 513 aa16.28■□□□□ 0.2
TREX1-203ENST00000456089 ANKRD44Q8N8A2 993 aa16.28■□□□□ 0.2
TREX1-203ENST00000456089 KLHDC4Q8TBB5 520 aa16.28■□□□□ 0.2
TREX1-203ENST00000456089 PRMT6Q96LA8 375 aaPredicted RBP16.28■□□□□ 0.2
TREX1-203ENST00000456089 ANGEL1Q9UNK9 670 aaKnown RBP16.28■□□□□ 0.2
TREX1-203ENST00000456089 IQSEC3Q9UPP2 1182 aaPredicted RBP16.28■□□□□ 0.2
TREX1-203ENST00000456089 SSC5DA1L4H1 1573 aa16.28■□□□□ 0.2
TREX1-203ENST00000456089 UTYO14607 1347 aa16.27■□□□□ 0.2
TREX1-203ENST00000456089 CT47B1P0C2W7 299 aaPredicted RBP16.27■□□□□ 0.2
TREX1-203ENST00000456089 RBM5P52756 815 aaKnown RBP eCLIP16.27■□□□□ 0.2
TREX1-203ENST00000456089 HNRNPUQ00839 825 aaKnown RBP eCLIP16.27■□□□□ 0.2
TREX1-203ENST00000456089 DEFB129Q9H1M3 183 aa16.27■□□□□ 0.2
TREX1-203ENST00000456089 VEZTQ9HBM0 779 aa16.27■□□□□ 0.2
TREX1-203ENST00000456089 PTPRCP08575 1304 aa16.26■□□□□ 0.19
TREX1-203ENST00000456089 SPDYE2BA6NHP3 402 aa16.26■□□□□ 0.19
TREX1-203ENST00000456089 TBC1D8O95759 1140 aa16.26■□□□□ 0.19
TREX1-203ENST00000456089 SPDYE6P0CI01 402 aa16.26■□□□□ 0.19
TREX1-203ENST00000456089 ALDH1L2Q3SY69 923 aa16.26■□□□□ 0.19
TREX1-203ENST00000456089 FAM84BQ96KN1 310 aaPredicted RBP16.26■□□□□ 0.19
TREX1-203ENST00000456089 SMC4Q9NTJ3 1288 aa16.26■□□□□ 0.19
TREX1-203ENST00000456089 RIPOR2Q9Y4F9 1068 aa16.26■□□□□ 0.19
TREX1-203ENST00000456089 HIBADHP31937 336 aaKnown RBP16.25■□□□□ 0.19
TREX1-203ENST00000456089 MMP14P50281 582 aa16.25■□□□□ 0.19
TREX1-203ENST00000456089 UBE4AQ14139 1066 aa16.25■□□□□ 0.19
TREX1-203ENST00000456089 GRIK5Q16478 980 aa16.25■□□□□ 0.19
TREX1-203ENST00000456089 MFSD14BQ5SR56 506 aa16.25■□□□□ 0.19
TREX1-203ENST00000456089 ARMC9Q7Z3E5 817 aa16.25■□□□□ 0.19
TREX1-203ENST00000456089 TRMT2AQ8IZ69 625 aaKnown RBP16.25■□□□□ 0.19
TREX1-203ENST00000456089 MTMR14Q8NCE2 650 aa16.25■□□□□ 0.19
TREX1-203ENST00000456089 TDRD7Q8NHU6 1098 aaKnown RBP16.25■□□□□ 0.19
TREX1-203ENST00000456089 CLMNQ96JQ2 1002 aa16.25■□□□□ 0.19
TREX1-203ENST00000456089 FAM205AQ6ZU69 1335 aa16.24■□□□□ 0.19
TREX1-203ENST00000456089 COL1A1P02452 1464 aaPredicted RBP16.24■□□□□ 0.19
TREX1-203ENST00000456089 LAMB1P07942 1786 aa16.24■□□□□ 0.19
TREX1-203ENST00000456089 FKBP1AP62942 108 aaKnown RBP16.24■□□□□ 0.19
TREX1-203ENST00000456089 CHAF1AQ13111 956 aaPredicted RBP16.24■□□□□ 0.19
TREX1-203ENST00000456089 RABL6Q3YEC7 729 aaPredicted RBP16.24■□□□□ 0.19
TREX1-203ENST00000456089 METTL24Q5JXM2 366 aa16.24■□□□□ 0.19
TREX1-203ENST00000456089 NBPF12Q5TAG4 269 aaPredicted RBP16.24■□□□□ 0.19
TREX1-203ENST00000456089 USP44Q9H0E7 712 aa16.24■□□□□ 0.19
TREX1-203ENST00000456089 LDLRAD1Q5T700 205 aa16.23■□□□□ 0.19
TREX1-203ENST00000456089 R3HDMLQ9H3Y0 253 aa16.23■□□□□ 0.19
TREX1-203ENST00000456089 TTF2Q9UNY4 1162 aaKnown RBP16.23■□□□□ 0.19
TREX1-203ENST00000456089 MROH5Q6ZUA9 1318 aa16.22■□□□□ 0.19
TREX1-203ENST00000456089 MYO1BO43795 1136 aa16.22■□□□□ 0.19
TREX1-203ENST00000456089 CDAN1Q8IWY9 1227 aa16.22■□□□□ 0.19
TREX1-203ENST00000456089 TDRD3Q9H7E2 651 aaKnown RBP16.22■□□□□ 0.19
TREX1-203ENST00000456089 TNRC18O15417 2968 aaPredicted RBP16.21■□□□□ 0.19
TREX1-203ENST00000456089 TM4SF4P48230 202 aa16.21■□□□□ 0.19
TREX1-203ENST00000456089 RASA3Q14644 834 aa16.21■□□□□ 0.19
TREX1-203ENST00000456089 SPRYD7Q5W111 196 aa16.21■□□□□ 0.19
TREX1-203ENST00000456089 FBXO33Q7Z6M2 555 aa16.21■□□□□ 0.19
TREX1-203ENST00000456089 VPS37DQ86XT2 251 aa16.21■□□□□ 0.19
TREX1-203ENST00000456089 REM2Q8IYK8 340 aaPredicted RBP16.21■□□□□ 0.19
TREX1-203ENST00000456089 VGLL2Q8N8G2 317 aa16.21■□□□□ 0.19
TREX1-203ENST00000456089 ZNF296Q8WUU4 475 aaPredicted RBP16.21■□□□□ 0.19
TREX1-203ENST00000456089 ZNF70Q9UC06 446 aaPredicted RBP16.21■□□□□ 0.19
TREX1-203ENST00000456089 BCAMP50895 628 aa16.2■□□□□ 0.18
TREX1-203ENST00000456089 SOX10P56693 466 aa16.2■□□□□ 0.18
TREX1-203ENST00000456089 MLLT1Q03111 559 aaPredicted RBP16.2■□□□□ 0.18
TREX1-203ENST00000456089 CTU1Q7Z7A3 348 aaKnown RBP16.2■□□□□ 0.18
TREX1-203ENST00000456089 SLC10A4Q96EP9 437 aa16.2■□□□□ 0.18
TREX1-203ENST00000456089 TCP10L2B9ZVM9 353 aa16.19■□□□□ 0.18
TREX1-203ENST00000456089 FRAT2O75474 233 aaPredicted RBP16.19■□□□□ 0.18
TREX1-203ENST00000456089 PDE8BO95263 885 aa16.19■□□□□ 0.18
TREX1-203ENST00000456089 CRKP46108 304 aa16.19■□□□□ 0.18
TREX1-203ENST00000456089 SPDYE2Q495Y8 402 aa16.19■□□□□ 0.18
TREX1-203ENST00000456089 DZIP1LQ8IYY4 767 aaKnown RBP16.19■□□□□ 0.18
TREX1-203ENST00000456089 WNK4Q96J92 1243 aa16.19■□□□□ 0.18
TREX1-203ENST00000456089 PPP2R3BQ9Y5P8 575 aa16.19■□□□□ 0.18
TREX1-203ENST00000456089 AK9Q5TCS8 1911 aa16.19■□□□□ 0.18
TREX1-203ENST00000456089 GPR25O00155 361 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms