RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 YTHDC1Q96MU7 727 aaKnown RBP30.97■■■□□ 2.55
MSH2-203ENST00000454849 RCAN3Q9UKA8 241 aa30.97■■■□□ 2.55
MSH2-203ENST00000454849 MYO3BQ8WXR4 1341 aa30.97■■■□□ 2.55
MSH2-203ENST00000454849 SASH1O94885 1247 aa30.96■■■□□ 2.55
MSH2-203ENST00000454849 FGFR2P21802 821 aa30.96■■■□□ 2.55
MSH2-203ENST00000454849 CHAF1AQ13111 956 aaPredicted RBP30.96■■■□□ 2.55
MSH2-203ENST00000454849 CEP126Q9P2H0 1117 aa30.96■■■□□ 2.55
MSH2-203ENST00000454849 POLR2AP24928 1970 aaKnown RBP30.96■■■□□ 2.55
MSH2-203ENST00000454849 PNMA6EA0A0J9YXQ4 647 aa30.95■■■□□ 2.55
MSH2-203ENST00000454849 CIAO1O76071 339 aa30.95■■■□□ 2.55
MSH2-203ENST00000454849 CAVIN4Q5BKX8 364 aa30.95■■■□□ 2.55
MSH2-203ENST00000454849 COPRSQ9NQ92 184 aa30.95■■■□□ 2.55
MSH2-203ENST00000454849 PCDHAC2Q9Y5I4 1007 aa30.95■■■□□ 2.55
MSH2-203ENST00000454849 IFIT1P09914 478 aaKnown RBP30.94■■■□□ 2.54
MSH2-203ENST00000454849 FRAT2O75474 233 aaPredicted RBP30.93■■■□□ 2.54
MSH2-203ENST00000454849 SLC5A1P13866 664 aa30.92■■■□□ 2.54
MSH2-203ENST00000454849 IL15P40933 162 aaPredicted RBP30.92■■■□□ 2.54
MSH2-203ENST00000454849 MTX1Q13505 466 aa30.92■■■□□ 2.54
MSH2-203ENST00000454849 ATP2B3Q16720 1220 aa30.92■■■□□ 2.54
MSH2-203ENST00000454849 SULF1Q8IWU6 871 aa30.92■■■□□ 2.54
MSH2-203ENST00000454849 HDAC9Q9UKV0 1011 aa30.92■■■□□ 2.54
MSH2-203ENST00000454849 WNT10BO00744 389 aa30.91■■■□□ 2.54
MSH2-203ENST00000454849 ZBTB7BO15156 539 aaPredicted RBP30.91■■■□□ 2.54
MSH2-203ENST00000454849 MFSD14BQ5SR56 506 aa30.91■■■□□ 2.54
MSH2-203ENST00000454849 LPIN2Q92539 896 aa30.91■■■□□ 2.54
MSH2-203ENST00000454849 FAM205AQ6ZU69 1335 aa30.91■■■□□ 2.54
MSH2-203ENST00000454849 CNTNAP1P78357 1384 aa30.91■■■□□ 2.54
MSH2-203ENST00000454849 VEGFBP49765 207 aa30.9■■■□□ 2.54
MSH2-203ENST00000454849 GRM1Q13255 1194 aa30.9■■■□□ 2.54
MSH2-203ENST00000454849 GRIK5Q16478 980 aa30.9■■■□□ 2.54
MSH2-203ENST00000454849 DEFB115Q30KQ5 88 aa30.9■■■□□ 2.54
MSH2-203ENST00000454849 PRAMEF18Q5VWM3 479 aa30.9■■■□□ 2.54
MSH2-203ENST00000454849 PAXIP1Q6ZW49 1069 aaPredicted RBP30.9■■■□□ 2.54
MSH2-203ENST00000454849 FBXO3Q9UK99 471 aa30.9■■■□□ 2.54
MSH2-203ENST00000454849 TFCP2Q12800 502 aa30.89■■■□□ 2.54
MSH2-203ENST00000454849 JMYQ8N9B5 988 aa30.89■■■□□ 2.54
MSH2-203ENST00000454849 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.89■■■□□ 2.54
MSH2-203ENST00000454849 ADORA1P30542 326 aa30.88■■■□□ 2.53
MSH2-203ENST00000454849 TRPM7Q96QT4 1865 aa30.87■■■□□ 2.53
MSH2-203ENST00000454849 TIMM10P62072 90 aa30.87■■■□□ 2.53
MSH2-203ENST00000454849 DLGAP5Q15398 846 aa30.87■■■□□ 2.53
MSH2-203ENST00000454849 RBM5P52756 815 aaKnown RBP eCLIP30.86■■■□□ 2.531e-6■■□□□ 13.4
MSH2-203ENST00000454849 FKBP1AP62942 108 aaKnown RBP30.86■■■□□ 2.53
MSH2-203ENST00000454849 CFAP100Q494V2 611 aa30.86■■■□□ 2.53
MSH2-203ENST00000454849 CDCA5Q96FF9 252 aa30.86■■■□□ 2.53
MSH2-203ENST00000454849 COG6Q9Y2V7 657 aa30.86■■■□□ 2.53
MSH2-203ENST00000454849 AOX1Q06278 1338 aa30.85■■■□□ 2.53
MSH2-203ENST00000454849 RASSF10A6NK89 507 aa30.85■■■□□ 2.53
MSH2-203ENST00000454849 ATP8B2P98198 1209 aa30.85■■■□□ 2.53
MSH2-203ENST00000454849 TTF2Q9UNY4 1162 aaKnown RBP30.85■■■□□ 2.53
MSH2-203ENST00000454849 TLL2Q9Y6L7 1015 aa30.85■■■□□ 2.53
MSH2-203ENST00000454849 CYP4F22Q6NT55 531 aa30.84■■■□□ 2.53
MSH2-203ENST00000454849 ZBED3Q96IU2 234 aaPredicted RBP30.84■■■□□ 2.53
MSH2-203ENST00000454849 PHKA1P46020 1223 aa30.83■■■□□ 2.53
MSH2-203ENST00000454849 G3BP1Q13283 466 aaKnown RBP eCLIP30.83■■■□□ 2.534e-6■■■■□ 21.1
MSH2-203ENST00000454849 SAPCD2Q86UD0 394 aa30.83■■■□□ 2.53
MSH2-203ENST00000454849 CLRN2A0PK11 232 aa30.82■■■□□ 2.52
MSH2-203ENST00000454849 POLA2Q14181 598 aa30.82■■■□□ 2.52
MSH2-203ENST00000454849 C20orf194Q5TEA3 1177 aa30.82■■■□□ 2.52
MSH2-203ENST00000454849 PRMT6Q96LA8 375 aaPredicted RBP30.82■■■□□ 2.52
MSH2-203ENST00000454849 PITPNM2Q9BZ72 1349 aa30.8■■■□□ 2.52
MSH2-203ENST00000454849 MS4A1P11836 297 aa30.8■■■□□ 2.52
MSH2-203ENST00000454849 CAPNS2Q96L46 248 aa30.8■■■□□ 2.52
MSH2-203ENST00000454849 NEUROD6Q96NK8 337 aa30.8■■■□□ 2.52
MSH2-203ENST00000454849 GBA2Q9HCG7 927 aaPredicted RBP30.8■■■□□ 2.52
MSH2-203ENST00000454849 WDR33Q9C0J8 1336 aaKnown RBP30.79■■■□□ 2.52
MSH2-203ENST00000454849 PCNTO95613 3336 aa30.79■■■□□ 2.52
MSH2-203ENST00000454849 A0A1B0GUL7 405 aa30.79■■■□□ 2.52
MSH2-203ENST00000454849 MMP14P50281 582 aa30.79■■■□□ 2.52
MSH2-203ENST00000454849 MVPQ14764 893 aaKnown RBP30.79■■■□□ 2.52
MSH2-203ENST00000454849 SSH3Q8TE77 659 aa30.79■■■□□ 2.52
MSH2-203ENST00000454849 SPDYE2BA6NHP3 402 aa30.78■■■□□ 2.52
MSH2-203ENST00000454849 SURF6O75683 361 aaKnown RBP30.78■■■□□ 2.52
MSH2-203ENST00000454849 SPDYE6P0CI01 402 aa30.78■■■□□ 2.52
MSH2-203ENST00000454849 HUNKP57058 714 aa30.78■■■□□ 2.52
MSH2-203ENST00000454849 OS9Q13438 667 aaPredicted RBP30.78■■■□□ 2.52
MSH2-203ENST00000454849 C2orf69Q8N8R5 385 aa30.78■■■□□ 2.52
MSH2-203ENST00000454849 COL1A1P02452 1464 aaPredicted RBP30.77■■■□□ 2.52
MSH2-203ENST00000454849 CCDC102BQ68D86 513 aa30.77■■■□□ 2.52
MSH2-203ENST00000454849 CEP85Q6P2H3 762 aa30.77■■■□□ 2.52
MSH2-203ENST00000454849 MOB2Q70IA6 237 aa30.77■■■□□ 2.52
MSH2-203ENST00000454849 MTMR14Q8NCE2 650 aa30.77■■■□□ 2.52
MSH2-203ENST00000454849 TBC1D22AQ8WUA7 517 aa30.77■■■□□ 2.52
MSH2-203ENST00000454849 XAGE2Q96GT9 111 aa30.77■■■□□ 2.52
MSH2-203ENST00000454849 VEZTQ9HBM0 779 aa30.77■■■□□ 2.52
MSH2-203ENST00000454849 CRKP46108 304 aa30.76■■■□□ 2.51
MSH2-203ENST00000454849 GNL3LQ9NVN8 582 aaKnown RBP30.76■■■□□ 2.51
MSH2-203ENST00000454849 AKAP2Q9Y2D5 859 aa30.76■■■□□ 2.51
MSH2-203ENST00000454849 AOC2O75106 756 aa30.75■■■□□ 2.51
MSH2-203ENST00000454849 HSPA1AP0DMV8 641 aaKnown RBP30.75■■■□□ 2.51
MSH2-203ENST00000454849 HSPA1BP0DMV9 641 aaKnown RBP30.75■■■□□ 2.51
MSH2-203ENST00000454849 TDRD3Q9H7E2 651 aaKnown RBP30.75■■■□□ 2.51
MSH2-203ENST00000454849 APOBEC3FQ8IUX4 373 aaKnown RBP30.74■■■□□ 2.51
MSH2-203ENST00000454849 SERPINA10Q9UK55 444 aa30.74■■■□□ 2.51
MSH2-203ENST00000454849 PRKG1Q13976 671 aa30.73■■■□□ 2.51
MSH2-203ENST00000454849 MYO1BO43795 1136 aa30.72■■■□□ 2.51
MSH2-203ENST00000454849 WDR66Q8TBY9 1149 aa30.72■■■□□ 2.51
MSH2-203ENST00000454849 DEFB129Q9H1M3 183 aa30.72■■■□□ 2.51
MSH2-203ENST00000454849 ECE1P42892 770 aa30.71■■■□□ 2.51
MSH2-203ENST00000454849 TTLL12Q14166 644 aaPredicted RBP30.71■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms