RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 PDE8BO95263 885 aa13.35□□□□□ -0.27
DDX39A-203ENST00000454233 DLGAP5Q15398 846 aa13.35□□□□□ -0.27
DDX39A-203ENST00000454233 CAVIN4Q5BKX8 364 aa13.35□□□□□ -0.27
DDX39A-203ENST00000454233 RGMBQ6NW40 437 aa13.35□□□□□ -0.27
DDX39A-203ENST00000454233 CERS5Q8N5B7 392 aa13.35□□□□□ -0.27
DDX39A-203ENST00000454233 TDRD7Q8NHU6 1098 aaKnown RBP13.35□□□□□ -0.27
DDX39A-203ENST00000454233 FRAT1Q92837 279 aaPredicted RBP13.35□□□□□ -0.27
DDX39A-203ENST00000454233 FAM84BQ96KN1 310 aaPredicted RBP13.35□□□□□ -0.27
DDX39A-203ENST00000454233 F8W031 263 aaPredicted RBP13.34□□□□□ -0.27
DDX39A-203ENST00000454233 EYA2O00167 538 aa13.34□□□□□ -0.27
DDX39A-203ENST00000454233 AOC2O75106 756 aa13.34□□□□□ -0.27
DDX39A-203ENST00000454233 FRAT2O75474 233 aaPredicted RBP13.34□□□□□ -0.27
DDX39A-203ENST00000454233 GNAI3P08754 354 aa13.34□□□□□ -0.27
DDX39A-203ENST00000454233 IFIT1P09914 478 aaKnown RBP13.34□□□□□ -0.27
DDX39A-203ENST00000454233 NF2P35240 595 aa13.34□□□□□ -0.27
DDX39A-203ENST00000454233 NOGQ13253 232 aa13.34□□□□□ -0.27
DDX39A-203ENST00000454233 INTS3Q68E01 1043 aaKnown RBP13.34□□□□□ -0.27
DDX39A-203ENST00000454233 APOBEC3FQ8IUX4 373 aaKnown RBP13.34□□□□□ -0.27
DDX39A-203ENST00000454233 TNS4Q8IZW8 715 aa13.34□□□□□ -0.27
DDX39A-203ENST00000454233 JAG2Q9Y219 1238 aa13.34□□□□□ -0.27
DDX39A-203ENST00000454233 THSD7BQ9C0I4 1608 aa13.34□□□□□ -0.27
DDX39A-203ENST00000454233 FAM205AQ6ZU69 1335 aa13.34□□□□□ -0.27
DDX39A-203ENST00000454233 MYO1BO43795 1136 aa13.33□□□□□ -0.28
DDX39A-203ENST00000454233 RFX5P48382 616 aaPredicted RBP13.33□□□□□ -0.28
DDX39A-203ENST00000454233 ZNF157P51786 506 aaPredicted RBP13.33□□□□□ -0.28
DDX39A-203ENST00000454233 FKBP1BP68106 108 aa13.33□□□□□ -0.28
DDX39A-203ENST00000454233 PTPN12Q05209 780 aaKnown RBP13.33□□□□□ -0.28
DDX39A-203ENST00000454233 PUM3Q15397 648 aaKnown RBP13.33□□□□□ -0.28
DDX39A-203ENST00000454233 MFSD14BQ5SR56 506 aa13.33□□□□□ -0.28
DDX39A-203ENST00000454233 ATF7IPQ6VMQ6 1270 aa13.33□□□□□ -0.28
DDX39A-203ENST00000454233 FBXO33Q7Z6M2 555 aa13.33□□□□□ -0.28
DDX39A-203ENST00000454233 VGLL2Q8N8G2 317 aa13.33□□□□□ -0.28
DDX39A-203ENST00000454233 MTMR14Q8NCE2 650 aa13.33□□□□□ -0.28
DDX39A-203ENST00000454233 CCDC102AQ96A19 550 aa13.33□□□□□ -0.28
DDX39A-203ENST00000454233 MEIS3Q99687 375 aa13.33□□□□□ -0.28
DDX39A-203ENST00000454233 PRDM10Q9NQV6 1147 aa13.33□□□□□ -0.28
DDX39A-203ENST00000454233 FBXO3Q9UK99 471 aa13.33□□□□□ -0.28
DDX39A-203ENST00000454233 SCAF8Q9UPN6 1271 aaKnown RBP13.33□□□□□ -0.28
DDX39A-203ENST00000454233 LRRFIP2Q9Y608 721 aaKnown RBP13.33□□□□□ -0.28
DDX39A-203ENST00000454233 BCAR3O75815 825 aa13.32□□□□□ -0.28
DDX39A-203ENST00000454233 SLC5A1P13866 664 aa13.32□□□□□ -0.28
DDX39A-203ENST00000454233 RBM5P52756 815 aaKnown RBP eCLIP13.32□□□□□ -0.284e-7■□□□□ 8.1
DDX39A-203ENST00000454233 LBX1P52954 281 aa13.32□□□□□ -0.28
DDX39A-203ENST00000454233 CFAP100Q494V2 611 aa13.32□□□□□ -0.28
DDX39A-203ENST00000454233 ZBED3Q96IU2 234 aaPredicted RBP13.32□□□□□ -0.28
DDX39A-203ENST00000454233 SIL1Q9H173 461 aa13.32□□□□□ -0.28
DDX39A-203ENST00000454233 CA12O43570 354 aa13.31□□□□□ -0.28
DDX39A-203ENST00000454233 CIAO1O76071 339 aa13.31□□□□□ -0.28
DDX39A-203ENST00000454233 HSPA8P11142 646 aaKnown RBP13.31□□□□□ -0.28
DDX39A-203ENST00000454233 TRIM27P14373 513 aa13.31□□□□□ -0.28
DDX39A-203ENST00000454233 CHAF1AQ13111 956 aaPredicted RBP13.31□□□□□ -0.28
DDX39A-203ENST00000454233 TTLL12Q14166 644 aaPredicted RBP13.31□□□□□ -0.28
DDX39A-203ENST00000454233 PRAMEF18Q5VWM3 479 aa13.31□□□□□ -0.28
DDX39A-203ENST00000454233 TBC1D22AQ8WUA7 517 aa13.31□□□□□ -0.28
DDX39A-203ENST00000454233 LPIN2Q92539 896 aa13.31□□□□□ -0.28
DDX39A-203ENST00000454233 CEP126Q9P2H0 1117 aa13.31□□□□□ -0.28
DDX39A-203ENST00000454233 TTF2Q9UNY4 1162 aaKnown RBP13.31□□□□□ -0.28
DDX39A-203ENST00000454233 IQSEC3Q9UPP2 1182 aaPredicted RBP13.31□□□□□ -0.28
DDX39A-203ENST00000454233 PAPPA2Q9BXP8 1791 aa13.3□□□□□ -0.28
DDX39A-203ENST00000454233 SPDYE2BA6NHP3 402 aa13.3□□□□□ -0.28
DDX39A-203ENST00000454233 SPDYE6P0CI01 402 aa13.3□□□□□ -0.28
DDX39A-203ENST00000454233 FGFR2P21802 821 aa13.3□□□□□ -0.28
DDX39A-203ENST00000454233 BCAMP50895 628 aa13.3□□□□□ -0.28
DDX39A-203ENST00000454233 ZKSCAN2Q63HK3 967 aa13.3□□□□□ -0.28
DDX39A-203ENST00000454233 ATG9AQ7Z3C6 839 aa13.3□□□□□ -0.28
DDX39A-203ENST00000454233 CLUAP1Q96AJ1 413 aa13.3□□□□□ -0.28
DDX39A-203ENST00000454233 ZBED9Q6R2W3 1325 aa13.3□□□□□ -0.28
DDX39A-203ENST00000454233 COL1A1P02452 1464 aaPredicted RBP13.29□□□□□ -0.28
DDX39A-203ENST00000454233 PCNTO95613 3336 aa13.29□□□□□ -0.28
DDX39A-203ENST00000454233 SLC10A3P09131 477 aa13.29□□□□□ -0.28
DDX39A-203ENST00000454233 IL15P40933 162 aaPredicted RBP13.29□□□□□ -0.28
DDX39A-203ENST00000454233 ARMC9Q7Z3E5 817 aa13.29□□□□□ -0.28
DDX39A-203ENST00000454233 DEFB129Q9H1M3 183 aa13.29□□□□□ -0.28
DDX39A-203ENST00000454233 VEZTQ9HBM0 779 aa13.29□□□□□ -0.28
DDX39A-203ENST00000454233 SERPINA10Q9UK55 444 aa13.29□□□□□ -0.28
DDX39A-203ENST00000454233 PPP2R3BQ9Y5P8 575 aa13.29□□□□□ -0.28
DDX39A-203ENST00000454233 CLRN2A0PK11 232 aa13.28□□□□□ -0.28
DDX39A-203ENST00000454233 FAM155AB1AL88 458 aaPredicted RBP13.28□□□□□ -0.28
DDX39A-203ENST00000454233 UBE2Q2LH0YL09 131 aa13.28□□□□□ -0.28
DDX39A-203ENST00000454233 SRGAP3O43295 1099 aa13.28□□□□□ -0.28
DDX39A-203ENST00000454233 GNAI2P04899 355 aa13.28□□□□□ -0.28
DDX39A-203ENST00000454233 KIF23Q02241 960 aaPredicted RBP13.28□□□□□ -0.28
DDX39A-203ENST00000454233 ATP2B3Q16720 1220 aa13.28□□□□□ -0.28
DDX39A-203ENST00000454233 MOB2Q70IA6 237 aa13.28□□□□□ -0.28
DDX39A-203ENST00000454233 PRMT6Q96LA8 375 aaPredicted RBP13.28□□□□□ -0.28
DDX39A-203ENST00000454233 COPRSQ9NQ92 184 aa13.28□□□□□ -0.28
DDX39A-203ENST00000454233 PA2G4Q9UQ80 394 aaKnown RBP13.28□□□□□ -0.28
DDX39A-203ENST00000454233 TNNQ9UQP3 1299 aa13.28□□□□□ -0.28
DDX39A-203ENST00000454233 PCDHAC2Q9Y5I4 1007 aa13.28□□□□□ -0.28
DDX39A-203ENST00000454233 CRKP46108 304 aa13.27□□□□□ -0.29
DDX39A-203ENST00000454233 MTX1Q13505 466 aa13.27□□□□□ -0.29
DDX39A-203ENST00000454233 TNFAIP1Q13829 316 aa13.27□□□□□ -0.29
DDX39A-203ENST00000454233 RASAL3Q86YV0 1011 aa13.27□□□□□ -0.29
DDX39A-203ENST00000454233 FTSJ3Q8IY81 847 aaKnown RBP13.27□□□□□ -0.29
DDX39A-203ENST00000454233 ZIC5Q96T25 663 aa13.27□□□□□ -0.29
DDX39A-203ENST00000454233 GNL3LQ9NVN8 582 aaKnown RBP13.27□□□□□ -0.29
DDX39A-203ENST00000454233 MAST3O60307 1309 aa13.27□□□□□ -0.29
DDX39A-203ENST00000454233 HDLBPQ00341 1268 aaKnown RBP13.26□□□□□ -0.29
DDX39A-203ENST00000454233 PRKG1Q13976 671 aa13.26□□□□□ -0.29
DDX39A-203ENST00000454233 SUPT20HL1Q3ZLR7 823 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms