RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 HNRNPUQ00839 825 aaKnown RBP eCLIP23.21■■□□□ 1.31
PDLIM2-214ENST00000452226 MOB2Q70IA6 237 aa23.21■■□□□ 1.31
PDLIM2-214ENST00000452226 REM2Q8IYK8 340 aaPredicted RBP23.21■■□□□ 1.31
PDLIM2-214ENST00000452226 IL1R1P14778 569 aa23.2■■□□□ 1.3
PDLIM2-214ENST00000452226 RASAL3Q86YV0 1011 aa23.2■■□□□ 1.3
PDLIM2-214ENST00000452226 CERS5Q8N5B7 392 aa23.2■■□□□ 1.3
PDLIM2-214ENST00000452226 KAZALD1Q96I82 304 aa23.2■■□□□ 1.3
PDLIM2-214ENST00000452226 UBE2Q2LH0YL09 131 aa23.19■■□□□ 1.3
PDLIM2-214ENST00000452226 NBPF7P0C2Y1 421 aaPredicted RBP23.19■■□□□ 1.3
PDLIM2-214ENST00000452226 NF2P35240 595 aa23.19■■□□□ 1.3
PDLIM2-214ENST00000452226 RGS19P49795 217 aa23.19■■□□□ 1.3
PDLIM2-214ENST00000452226 TTLL12Q14166 644 aaPredicted RBP23.19■■□□□ 1.3
PDLIM2-214ENST00000452226 APOBEC3FQ8IUX4 373 aaKnown RBP23.19■■□□□ 1.3
PDLIM2-214ENST00000452226 ZBED3Q96IU2 234 aaPredicted RBP23.19■■□□□ 1.3
PDLIM2-214ENST00000452226 CSRNP1Q96S65 589 aa23.19■■□□□ 1.3
PDLIM2-214ENST00000452226 UTYO14607 1347 aa23.18■■□□□ 1.3
PDLIM2-214ENST00000452226 DLGAP5Q15398 846 aa23.18■■□□□ 1.3
PDLIM2-214ENST00000452226 RNF186Q9NXI6 227 aa23.18■■□□□ 1.3
PDLIM2-214ENST00000452226 PTPRCP08575 1304 aa23.17■■□□□ 1.3
PDLIM2-214ENST00000452226 TRPA1O75762 1119 aa23.17■■□□□ 1.3
PDLIM2-214ENST00000452226 PUS3Q9BZE2 481 aaKnown RBP23.16■■□□□ 1.3
PDLIM2-214ENST00000452226 BICC1Q9H694 974 aaKnown RBP23.16■■□□□ 1.3
PDLIM2-214ENST00000452226 JAG2Q9Y219 1238 aa23.16■■□□□ 1.3
PDLIM2-214ENST00000452226 ECM29Q5VYK3 1845 aa23.16■■□□□ 1.3
PDLIM2-214ENST00000452226 F8W031 263 aaPredicted RBP23.15■■□□□ 1.3
PDLIM2-214ENST00000452226 FKBP1AP62942 108 aaKnown RBP23.15■■□□□ 1.3
PDLIM2-214ENST00000452226 UBE4AQ14139 1066 aa23.15■■□□□ 1.3
PDLIM2-214ENST00000452226 MTMR14Q8NCE2 650 aa23.15■■□□□ 1.3
PDLIM2-214ENST00000452226 SMC4Q9NTJ3 1288 aa23.14■■□□□ 1.29
PDLIM2-214ENST00000452226 RIPOR2Q9Y4F9 1068 aa23.14■■□□□ 1.29
PDLIM2-214ENST00000452226 ZBED9Q6R2W3 1325 aa23.13■■□□□ 1.29
PDLIM2-214ENST00000452226 RARSP54136 660 aaKnown RBP23.13■■□□□ 1.29
PDLIM2-214ENST00000452226 RABL6Q3YEC7 729 aaPredicted RBP23.13■■□□□ 1.29
PDLIM2-214ENST00000452226 CFAP100Q494V2 611 aa23.13■■□□□ 1.29
PDLIM2-214ENST00000452226 PCDHAC2Q9Y5I4 1007 aa23.13■■□□□ 1.29
PDLIM2-214ENST00000452226 GYG1P46976 350 aa23.12■■□□□ 1.29
PDLIM2-214ENST00000452226 PRKG1Q13976 671 aa23.12■■□□□ 1.29
PDLIM2-214ENST00000452226 ARMC9Q7Z3E5 817 aa23.12■■□□□ 1.29
PDLIM2-214ENST00000452226 ANKRD44Q8N8A2 993 aa23.12■■□□□ 1.29
PDLIM2-214ENST00000452226 DEFB129Q9H1M3 183 aa23.12■■□□□ 1.29
PDLIM2-214ENST00000452226 FAM205AQ6ZU69 1335 aa23.11■■□□□ 1.29
PDLIM2-214ENST00000452226 MROH5Q6ZUA9 1318 aa23.11■■□□□ 1.29
PDLIM2-214ENST00000452226 MYO1BO43795 1136 aa23.11■■□□□ 1.29
PDLIM2-214ENST00000452226 HIBADHP31937 336 aaKnown RBP23.11■■□□□ 1.29
PDLIM2-214ENST00000452226 TDRD7Q8NHU6 1098 aaKnown RBP23.11■■□□□ 1.29
PDLIM2-214ENST00000452226 FAM84BQ96KN1 310 aaPredicted RBP23.11■■□□□ 1.29
PDLIM2-214ENST00000452226 COL1A1P02452 1464 aaPredicted RBP23.11■■□□□ 1.29
PDLIM2-214ENST00000452226 SPDYE2BA6NHP3 402 aa23.1■■□□□ 1.29
PDLIM2-214ENST00000452226 SPDYE6P0CI01 402 aa23.1■■□□□ 1.29
PDLIM2-214ENST00000452226 RBM5P52756 815 aaKnown RBP eCLIP23.1■■□□□ 1.29
PDLIM2-214ENST00000452226 PTPN12Q05209 780 aaKnown RBP23.1■■□□□ 1.29
PDLIM2-214ENST00000452226 PRMT6Q96LA8 375 aaPredicted RBP23.1■■□□□ 1.29
PDLIM2-214ENST00000452226 CLRN2A0PK11 232 aa23.09■■□□□ 1.29
PDLIM2-214ENST00000452226 LRRC24Q50LG9 513 aa23.09■■□□□ 1.29
PDLIM2-214ENST00000452226 MFSD14BQ5SR56 506 aa23.09■■□□□ 1.29
PDLIM2-214ENST00000452226 USP44Q9H0E7 712 aa23.09■■□□□ 1.29
PDLIM2-214ENST00000452226 ANGEL1Q9UNK9 670 aaKnown RBP23.09■■□□□ 1.29
PDLIM2-214ENST00000452226 MKRN3Q13064 507 aaKnown RBP23.08■■□□□ 1.29
PDLIM2-214ENST00000452226 METTL24Q5JXM2 366 aa23.08■■□□□ 1.29
PDLIM2-214ENST00000452226 PPP2R3BQ9Y5P8 575 aa23.08■■□□□ 1.29
PDLIM2-214ENST00000452226 LDLRAD1Q5T700 205 aa23.07■■□□□ 1.28
PDLIM2-214ENST00000452226 VPS37DQ86XT2 251 aa23.07■■□□□ 1.28
PDLIM2-214ENST00000452226 VEZTQ9HBM0 779 aa23.07■■□□□ 1.28
PDLIM2-214ENST00000452226 NOB1Q9ULX3 412 aaKnown RBP23.07■■□□□ 1.28
PDLIM2-214ENST00000452226 TTF2Q9UNY4 1162 aaKnown RBP23.07■■□□□ 1.28
PDLIM2-214ENST00000452226 FZD1Q9UP38 647 aa23.07■■□□□ 1.28
PDLIM2-214ENST00000452226 AOX1Q06278 1338 aa23.07■■□□□ 1.28
PDLIM2-214ENST00000452226 ARAP2Q8WZ64 1704 aa23.06■■□□□ 1.28
PDLIM2-214ENST00000452226 TM4SF4P48230 202 aa23.05■■□□□ 1.28
PDLIM2-214ENST00000452226 FBXO33Q7Z6M2 555 aa23.05■■□□□ 1.28
PDLIM2-214ENST00000452226 CTU1Q7Z7A3 348 aaKnown RBP23.05■■□□□ 1.28
PDLIM2-214ENST00000452226 VGLL2Q8N8G2 317 aa23.05■■□□□ 1.28
PDLIM2-214ENST00000452226 KLHDC4Q8TBB5 520 aa23.05■■□□□ 1.28
PDLIM2-214ENST00000452226 SERPINA10Q9UK55 444 aa23.05■■□□□ 1.28
PDLIM2-214ENST00000452226 IQSEC3Q9UPP2 1182 aaPredicted RBP23.05■■□□□ 1.28
PDLIM2-214ENST00000452226 PPP1R12BO60237 982 aaPredicted RBP23.04■■□□□ 1.28
PDLIM2-214ENST00000452226 PDE8BO95263 885 aa23.04■■□□□ 1.28
PDLIM2-214ENST00000452226 SUPT20HL1Q3ZLR7 823 aa23.04■■□□□ 1.28
PDLIM2-214ENST00000452226 CAVIN4Q5BKX8 364 aa23.04■■□□□ 1.28
PDLIM2-214ENST00000452226 ARHGAP45Q92619 1136 aa23.04■■□□□ 1.28
PDLIM2-214ENST00000452226 SSC5DA1L4H1 1573 aa23.04■■□□□ 1.28
PDLIM2-214ENST00000452226 TBC1D8O95759 1140 aa23.03■■□□□ 1.28
PDLIM2-214ENST00000452226 SREBF2Q12772 1141 aa23.03■■□□□ 1.28
PDLIM2-214ENST00000452226 MAP3K11Q16584 847 aa23.03■■□□□ 1.28
PDLIM2-214ENST00000452226 SPRYD7Q5W111 196 aa23.03■■□□□ 1.28
PDLIM2-214ENST00000452226 SLC10A4Q96EP9 437 aa23.03■■□□□ 1.28
PDLIM2-214ENST00000452226 API5Q9BZZ5 524 aaKnown RBP23.03■■□□□ 1.28
PDLIM2-214ENST00000452226 FRAT2O75474 233 aaPredicted RBP23.02■■□□□ 1.28
PDLIM2-214ENST00000452226 CHAF1AQ13111 956 aaPredicted RBP23.02■■□□□ 1.28
PDLIM2-214ENST00000452226 RASA3Q14644 834 aa23.02■■□□□ 1.28
PDLIM2-214ENST00000452226 NBPF12Q5TAG4 269 aaPredicted RBP23.02■■□□□ 1.28
PDLIM2-214ENST00000452226 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.02■■□□□ 1.28
PDLIM2-214ENST00000452226 ZNF70Q9UC06 446 aaPredicted RBP23.02■■□□□ 1.28
PDLIM2-214ENST00000452226 KIF16BQ96L93 1317 aa23.02■■□□□ 1.28
PDLIM2-214ENST00000452226 PKN2Q16513 984 aaKnown RBP23.01■■□□□ 1.27
PDLIM2-214ENST00000452226 SPDYE2Q495Y8 402 aa23.01■■□□□ 1.27
PDLIM2-214ENST00000452226 DZIP1LQ8IYY4 767 aaKnown RBP23.01■■□□□ 1.27
PDLIM2-214ENST00000452226 TDRD3Q9H7E2 651 aaKnown RBP23.01■■□□□ 1.27
PDLIM2-214ENST00000452226 BCAR3O75815 825 aa23■■□□□ 1.27
PDLIM2-214ENST00000452226 CRKP46108 304 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms