RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 SCAF8Q9UPN6 1271 aaKnown RBP13.85□□□□□ -0.19
USP1-204ENST00000452143 UBE2Q2LH0YL09 131 aa13.84□□□□□ -0.19
USP1-204ENST00000452143 SREBF2Q12772 1141 aa13.84□□□□□ -0.19
USP1-204ENST00000452143 NOM1Q5C9Z4 860 aaKnown RBP13.84□□□□□ -0.19
USP1-204ENST00000452143 ZNF804AQ7Z570 1209 aa13.84□□□□□ -0.19
USP1-204ENST00000452143 MTMR14Q8NCE2 650 aa13.84□□□□□ -0.19
USP1-204ENST00000452143 CD209Q9NNX6 404 aa13.84□□□□□ -0.19
USP1-204ENST00000452143 PPP2R3BQ9Y5P8 575 aa13.84□□□□□ -0.19
USP1-204ENST00000452143 ANP32CO43423 234 aa13.83□□□□□ -0.2
USP1-204ENST00000452143 TM4SF4P48230 202 aa13.83□□□□□ -0.2
USP1-204ENST00000452143 FKBP1AP62942 108 aaKnown RBP13.83□□□□□ -0.2
USP1-204ENST00000452143 FOXO4P98177 505 aa13.83□□□□□ -0.2
USP1-204ENST00000452143 EXOSC9Q06265 439 aaKnown RBP13.83□□□□□ -0.2
USP1-204ENST00000452143 PKN2Q16513 984 aaKnown RBP13.83□□□□□ -0.2
USP1-204ENST00000452143 BEND3Q5T5X7 828 aa13.83□□□□□ -0.2
USP1-204ENST00000452143 PRAMEF18Q5VWM3 479 aa13.83□□□□□ -0.2
USP1-204ENST00000452143 ARMC9Q7Z3E5 817 aa13.83□□□□□ -0.2
USP1-204ENST00000452143 GRM8O00222 908 aa13.82□□□□□ -0.2
USP1-204ENST00000452143 IL1R1P14778 569 aa13.82□□□□□ -0.2
USP1-204ENST00000452143 CCDC57Q2TAC2 916 aa13.82□□□□□ -0.2
USP1-204ENST00000452143 CFHR5Q9BXR6 569 aa13.82□□□□□ -0.2
USP1-204ENST00000452143 CHMP3Q9Y3E7 222 aa13.82□□□□□ -0.2
USP1-204ENST00000452143 SSC5DA1L4H1 1573 aa13.81□□□□□ -0.2
USP1-204ENST00000452143 F6X3S4 739 aa13.81□□□□□ -0.2
USP1-204ENST00000452143 MYO1BO43795 1136 aa13.81□□□□□ -0.2
USP1-204ENST00000452143 TAF5LO75529 589 aa13.81□□□□□ -0.2
USP1-204ENST00000452143 DLGAP5Q15398 846 aa13.81□□□□□ -0.2
USP1-204ENST00000452143 LDLRAD1Q5T700 205 aa13.81□□□□□ -0.2
USP1-204ENST00000452143 CERS5Q8N5B7 392 aa13.81□□□□□ -0.2
USP1-204ENST00000452143 DEFB129Q9H1M3 183 aa13.81□□□□□ -0.2
USP1-204ENST00000452143 OTOFQ9HC10 1997 aa13.8□□□□□ -0.2
USP1-204ENST00000452143 UNCXA6NJT0 531 aa13.8□□□□□ -0.2
USP1-204ENST00000452143 SLC34A2O95436 690 aa13.8□□□□□ -0.2
USP1-204ENST00000452143 MAP3K11Q16584 847 aa13.8□□□□□ -0.2
USP1-204ENST00000452143 TAF7LQ5H9L4 462 aa13.8□□□□□ -0.2
USP1-204ENST00000452143 LMBR1LQ6UX01 489 aa13.8□□□□□ -0.2
USP1-204ENST00000452143 ZNF296Q8WUU4 475 aaPredicted RBP13.8□□□□□ -0.2
USP1-204ENST00000452143 ANGEL1Q9UNK9 670 aaKnown RBP13.8□□□□□ -0.2
USP1-204ENST00000452143 SPDYE2BA6NHP3 402 aa13.79□□□□□ -0.2
USP1-204ENST00000452143 SNAP23O00161 211 aa13.79□□□□□ -0.2
USP1-204ENST00000452143 ALDH1L1O75891 902 aa13.79□□□□□ -0.2
USP1-204ENST00000452143 TBC1D8O95759 1140 aa13.79□□□□□ -0.2
USP1-204ENST00000452143 ALDH1A1P00352 501 aa13.79□□□□□ -0.2
USP1-204ENST00000452143 SPDYE6P0CI01 402 aa13.79□□□□□ -0.2
USP1-204ENST00000452143 ZBTB48P10074 688 aaPredicted RBP13.79□□□□□ -0.2
USP1-204ENST00000452143 PTPN12Q05209 780 aaKnown RBP13.79□□□□□ -0.2
USP1-204ENST00000452143 SPRYD7Q5W111 196 aa13.79□□□□□ -0.2
USP1-204ENST00000452143 LDHAL6AQ6ZMR3 332 aa13.79□□□□□ -0.2
USP1-204ENST00000452143 HELBQ8NG08 1087 aaPredicted RBP13.79□□□□□ -0.2
USP1-204ENST00000452143 SALL2Q9Y467 1007 aaPredicted RBP13.79□□□□□ -0.2
USP1-204ENST00000452143 HTTP42858 3142 aa13.79□□□□□ -0.2
USP1-204ENST00000452143 GPR25O00155 361 aa13.78□□□□□ -0.2
USP1-204ENST00000452143 PPP1R12BO60237 982 aaPredicted RBP13.78□□□□□ -0.2
USP1-204ENST00000452143 SOX10P56693 466 aa13.78□□□□□ -0.2
USP1-204ENST00000452143 INHBEP58166 350 aa13.78□□□□□ -0.2
USP1-204ENST00000452143 CFAP100Q494V2 611 aa13.78□□□□□ -0.2
USP1-204ENST00000452143 EPHA10Q5JZY3 1008 aa13.78□□□□□ -0.2
USP1-204ENST00000452143 SRCIN1Q9C0H9 1055 aa13.78□□□□□ -0.2
USP1-204ENST00000452143 CNNM1Q9NRU3 951 aa13.78□□□□□ -0.2
USP1-204ENST00000452143 C9orf78Q9NZ63 289 aaPredicted RBP13.78□□□□□ -0.2
USP1-204ENST00000452143 HPS5Q9UPZ3 1129 aa13.78□□□□□ -0.2
USP1-204ENST00000452143 FAM205AQ6ZU69 1335 aa13.78□□□□□ -0.2
USP1-204ENST00000452143 MANSC4A6NHS7 340 aaPredicted RBP13.77□□□□□ -0.21
USP1-204ENST00000452143 ZEB1P37275 1124 aaPredicted RBP13.77□□□□□ -0.21
USP1-204ENST00000452143 MKRN3Q13064 507 aaKnown RBP13.77□□□□□ -0.21
USP1-204ENST00000452143 PRKG1Q13976 671 aa13.77□□□□□ -0.21
USP1-204ENST00000452143 UBE4AQ14139 1066 aa13.77□□□□□ -0.21
USP1-204ENST00000452143 SUPT20HL1Q3ZLR7 823 aa13.77□□□□□ -0.21
USP1-204ENST00000452143 F8W031 263 aaPredicted RBP13.76□□□□□ -0.21
USP1-204ENST00000452143 TNFAIP1Q13829 316 aa13.76□□□□□ -0.21
USP1-204ENST00000452143 ZNF594Q96JF6 807 aaPredicted RBP13.76□□□□□ -0.21
USP1-204ENST00000452143 SERPINA10Q9UK55 444 aa13.76□□□□□ -0.21
USP1-204ENST00000452143 UTYO14607 1347 aa13.75□□□□□ -0.21
USP1-204ENST00000452143 MYH13Q9UKX3 1938 aa13.75□□□□□ -0.21
USP1-204ENST00000452143 CLRN2A0PK11 232 aa13.75□□□□□ -0.21
USP1-204ENST00000452143 FKTNO75072 461 aa13.75□□□□□ -0.21
USP1-204ENST00000452143 MFSD14BQ5SR56 506 aa13.75□□□□□ -0.21
USP1-204ENST00000452143 FBXO46Q6PJ61 603 aaPredicted RBP13.75□□□□□ -0.21
USP1-204ENST00000452143 SLC4A10Q6U841 1118 aa13.75□□□□□ -0.21
USP1-204ENST00000452143 TDRD7Q8NHU6 1098 aaKnown RBP13.75□□□□□ -0.21
USP1-204ENST00000452143 SLC10A4Q96EP9 437 aa13.75□□□□□ -0.21
USP1-204ENST00000452143 PRMT6Q96LA8 375 aaPredicted RBP13.75□□□□□ -0.21
USP1-204ENST00000452143 VEZTQ9HBM0 779 aa13.75□□□□□ -0.21
USP1-204ENST00000452143 RBBP6Q7Z6E9 1792 aaKnown RBP13.74□□□□□ -0.21
USP1-204ENST00000452143 MROH5Q6ZUA9 1318 aa13.74□□□□□ -0.21
USP1-204ENST00000452143 ZNF521Q96K83 1311 aa13.74□□□□□ -0.21
USP1-204ENST00000452143 PLIN1O60240 522 aa13.74□□□□□ -0.21
USP1-204ENST00000452143 IREB2P48200 963 aaKnown RBP13.74□□□□□ -0.21
USP1-204ENST00000452143 RBM5P52756 815 aaKnown RBP eCLIP13.74□□□□□ -0.21
USP1-204ENST00000452143 EVX2Q03828 476 aa13.74□□□□□ -0.21
USP1-204ENST00000452143 IFNL1Q8IU54 200 aa13.74□□□□□ -0.21
USP1-204ENST00000452143 WNK4Q96J92 1243 aa13.74□□□□□ -0.21
USP1-204ENST00000452143 FZD1Q9UP38 647 aa13.74□□□□□ -0.21
USP1-204ENST00000452143 JAG2Q9Y219 1238 aa13.74□□□□□ -0.21
USP1-204ENST00000452143 PCDHAC2Q9Y5I4 1007 aa13.74□□□□□ -0.21
USP1-204ENST00000452143 ZNF316A6NFI3 1004 aaPredicted RBP13.73□□□□□ -0.21
USP1-204ENST00000452143 HIBADHP31937 336 aaKnown RBP13.73□□□□□ -0.21
USP1-204ENST00000452143 RASA3Q14644 834 aa13.73□□□□□ -0.21
USP1-204ENST00000452143 RABL6Q3YEC7 729 aaPredicted RBP13.73□□□□□ -0.21
USP1-204ENST00000452143 SPDYE2Q495Y8 402 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms