RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 PTPN12Q05209 780 aaKnown RBP22.42■■□□□ 1.18
CTNS-204ENST00000452111 CDCA5Q96FF9 252 aa22.42■■□□□ 1.18
CTNS-204ENST00000452111 HDAC5Q9UQL6 1122 aa22.42■■□□□ 1.18
CTNS-204ENST00000452111 PITPNM2Q9BZ72 1349 aa22.41■■□□□ 1.18
CTNS-204ENST00000452111 VPS37DQ86XT2 251 aa22.41■■□□□ 1.18
CTNS-204ENST00000452111 TDRD7Q8NHU6 1098 aaKnown RBP22.41■■□□□ 1.18
CTNS-204ENST00000452111 SIL1Q9H173 461 aa22.41■■□□□ 1.18
CTNS-204ENST00000452111 GBA2Q9HCG7 927 aaPredicted RBP22.41■■□□□ 1.18
CTNS-204ENST00000452111 MMP14P50281 582 aa22.4■■□□□ 1.18
CTNS-204ENST00000452111 HUNKP57058 714 aa22.4■■□□□ 1.18
CTNS-204ENST00000452111 GNAI3P08754 354 aa22.39■■□□□ 1.17
CTNS-204ENST00000452111 FKBP1AP62942 108 aaKnown RBP22.39■■□□□ 1.17
CTNS-204ENST00000452111 PUM3Q15397 648 aaKnown RBP22.39■■□□□ 1.17
CTNS-204ENST00000452111 CAVIN4Q5BKX8 364 aa22.39■■□□□ 1.17
CTNS-204ENST00000452111 ZKSCAN2Q63HK3 967 aa22.39■■□□□ 1.17
CTNS-204ENST00000452111 C2orf69Q8N8R5 385 aa22.39■■□□□ 1.17
CTNS-204ENST00000452111 AIDAQ96BJ3 306 aa22.39■■□□□ 1.17
CTNS-204ENST00000452111 IQSEC3Q9UPP2 1182 aaPredicted RBP22.39■■□□□ 1.17
CTNS-204ENST00000452111 FAM205AQ6ZU69 1335 aa22.38■■□□□ 1.17
CTNS-204ENST00000452111 MFSD14BQ5SR56 506 aa22.38■■□□□ 1.17
CTNS-204ENST00000452111 ATG9AQ7Z3C6 839 aa22.38■■□□□ 1.17
CTNS-204ENST00000452111 FBXO33Q7Z6M2 555 aa22.38■■□□□ 1.17
CTNS-204ENST00000452111 HHIPL1Q96JK4 782 aa22.38■■□□□ 1.17
CTNS-204ENST00000452111 PA2G4Q9UQ80 394 aaKnown RBP22.38■■□□□ 1.17
CTNS-204ENST00000452111 FOXN1O15353 648 aa22.37■■□□□ 1.17
CTNS-204ENST00000452111 AOC2O75106 756 aa22.37■■□□□ 1.17
CTNS-204ENST00000452111 IFIT1P09914 478 aaKnown RBP22.37■■□□□ 1.17
CTNS-204ENST00000452111 DLGAP5Q15398 846 aa22.37■■□□□ 1.17
CTNS-204ENST00000452111 PRAMEF18Q5VWM3 479 aa22.37■■□□□ 1.17
CTNS-204ENST00000452111 WBP1LQ9NX94 342 aa22.37■■□□□ 1.17
CTNS-204ENST00000452111 PCDHAC2Q9Y5I4 1007 aa22.37■■□□□ 1.17
CTNS-204ENST00000452111 FRAT2O75474 233 aaPredicted RBP22.36■■□□□ 1.17
CTNS-204ENST00000452111 FGFR2P21802 821 aa22.36■■□□□ 1.17
CTNS-204ENST00000452111 BCAMP50895 628 aa22.36■■□□□ 1.17
CTNS-204ENST00000452111 MAP2K1Q02750 393 aaPredicted RBP22.36■■□□□ 1.17
CTNS-204ENST00000452111 CHAF1AQ13111 956 aaPredicted RBP22.36■■□□□ 1.17
CTNS-204ENST00000452111 COL13A1Q5TAT6 717 aaPredicted RBP22.36■■□□□ 1.17
CTNS-204ENST00000452111 TMEM57Q8N5G2 664 aa22.36■■□□□ 1.17
CTNS-204ENST00000452111 ZBED3Q96IU2 234 aaPredicted RBP22.36■■□□□ 1.17
CTNS-204ENST00000452111 POLR2AP24928 1970 aaKnown RBP22.36■■□□□ 1.17
CTNS-204ENST00000452111 CIAO1O76071 339 aa22.35■■□□□ 1.17
CTNS-204ENST00000452111 SLC5A1P13866 664 aa22.35■■□□□ 1.17
CTNS-204ENST00000452111 CFAP100Q494V2 611 aa22.35■■□□□ 1.17
CTNS-204ENST00000452111 FBXO3Q9UK99 471 aa22.35■■□□□ 1.17
CTNS-204ENST00000452111 SRGAP3O43295 1099 aa22.34■■□□□ 1.17
CTNS-204ENST00000452111 RBM5P52756 815 aaKnown RBP eCLIP22.34■■□□□ 1.17
CTNS-204ENST00000452111 APOBEC3FQ8IUX4 373 aaKnown RBP22.34■■□□□ 1.17
CTNS-204ENST00000452111 LPIN2Q92539 896 aa22.34■■□□□ 1.17
CTNS-204ENST00000452111 GNAI2P04899 355 aa22.33■■□□□ 1.17
CTNS-204ENST00000452111 RGMBQ6NW40 437 aa22.33■■□□□ 1.17
CTNS-204ENST00000452111 FTSJ3Q8IY81 847 aaKnown RBP22.33■■□□□ 1.17
CTNS-204ENST00000452111 MTMR14Q8NCE2 650 aa22.33■■□□□ 1.17
CTNS-204ENST00000452111 COPRSQ9NQ92 184 aa22.33■■□□□ 1.17
CTNS-204ENST00000452111 CEP126Q9P2H0 1117 aa22.33■■□□□ 1.17
CTNS-204ENST00000452111 TTF2Q9UNY4 1162 aaKnown RBP22.33■■□□□ 1.17
CTNS-204ENST00000452111 THSD7BQ9C0I4 1608 aa22.32■■□□□ 1.16
CTNS-204ENST00000452111 CLRN2A0PK11 232 aa22.32■■□□□ 1.16
CTNS-204ENST00000452111 SPDYE2BA6NHP3 402 aa22.32■■□□□ 1.16
CTNS-204ENST00000452111 SPDYE6P0CI01 402 aa22.32■■□□□ 1.16
CTNS-204ENST00000452111 MAP2K2P36507 400 aa22.32■■□□□ 1.16
CTNS-204ENST00000452111 IL15P40933 162 aaPredicted RBP22.32■■□□□ 1.16
CTNS-204ENST00000452111 MYO1BO43795 1136 aa22.31■■□□□ 1.16
CTNS-204ENST00000452111 CTCFP49711 727 aaPredicted RBP22.31■■□□□ 1.16
CTNS-204ENST00000452111 ZNF157P51786 506 aaPredicted RBP22.31■■□□□ 1.16
CTNS-204ENST00000452111 GRIK5Q16478 980 aa22.31■■□□□ 1.16
CTNS-204ENST00000452111 ATP2B3Q16720 1220 aa22.31■■□□□ 1.16
CTNS-204ENST00000452111 MOB2Q70IA6 237 aa22.31■■□□□ 1.16
CTNS-204ENST00000452111 PRMT6Q96LA8 375 aaPredicted RBP22.31■■□□□ 1.16
CTNS-204ENST00000452111 AOX1Q06278 1338 aa22.31■■□□□ 1.16
CTNS-204ENST00000452111 MTX1Q13505 466 aa22.3■■□□□ 1.16
CTNS-204ENST00000452111 BEGAINQ9BUH8 593 aa22.3■■□□□ 1.16
CTNS-204ENST00000452111 VEZTQ9HBM0 779 aa22.3■■□□□ 1.16
CTNS-204ENST00000452111 NF2P35240 595 aa22.29■■□□□ 1.16
CTNS-204ENST00000452111 FKBP1BP68106 108 aa22.29■■□□□ 1.16
CTNS-204ENST00000452111 NOGQ13253 232 aa22.29■■□□□ 1.16
CTNS-204ENST00000452111 TTLL12Q14166 644 aaPredicted RBP22.29■■□□□ 1.16
CTNS-204ENST00000452111 DZIP1LQ8IYY4 767 aaKnown RBP22.29■■□□□ 1.16
CTNS-204ENST00000452111 TBC1D22AQ8WUA7 517 aa22.29■■□□□ 1.16
CTNS-204ENST00000452111 ZIC5Q96T25 663 aa22.29■■□□□ 1.16
CTNS-204ENST00000452111 DEFB129Q9H1M3 183 aa22.29■■□□□ 1.16
CTNS-204ENST00000452111 SERPINA10Q9UK55 444 aa22.29■■□□□ 1.16
CTNS-204ENST00000452111 RLBP1P12271 317 aa22.28■■□□□ 1.16
CTNS-204ENST00000452111 ITPRIPQ8IWB1 547 aa22.28■■□□□ 1.16
CTNS-204ENST00000452111 PAPPA2Q9BXP8 1791 aa22.27■■□□□ 1.16
CTNS-204ENST00000452111 FAM155AB1AL88 458 aaPredicted RBP22.27■■□□□ 1.16
CTNS-204ENST00000452111 CRKP46108 304 aa22.27■■□□□ 1.16
CTNS-204ENST00000452111 LBX1P52954 281 aa22.27■■□□□ 1.16
CTNS-204ENST00000452111 CCDC102AQ96A19 550 aa22.27■■□□□ 1.16
CTNS-204ENST00000452111 PNMA6EA0A0J9YXQ4 647 aa22.26■■□□□ 1.15
CTNS-204ENST00000452111 UBE2Q2LH0YL09 131 aa22.26■■□□□ 1.15
CTNS-204ENST00000452111 HSPA8P11142 646 aaKnown RBP22.26■■□□□ 1.15
CTNS-204ENST00000452111 PRKG1Q13976 671 aa22.26■■□□□ 1.15
CTNS-204ENST00000452111 IFFO2Q5TF58 517 aa22.26■■□□□ 1.15
CTNS-204ENST00000452111 SLC10A3P09131 477 aa22.25■■□□□ 1.15
CTNS-204ENST00000452111 ADORA1P30542 326 aa22.25■■□□□ 1.15
CTNS-204ENST00000452111 TNS4Q8IZW8 715 aa22.25■■□□□ 1.15
CTNS-204ENST00000452111 TDRD3Q9H7E2 651 aaKnown RBP22.25■■□□□ 1.15
CTNS-204ENST00000452111 C1orf115Q9H7X2 142 aa22.25■■□□□ 1.15
CTNS-204ENST00000452111 TSKSQ9UJT2 592 aa22.25■■□□□ 1.15
CTNS-204ENST00000452111 COL1A1P02452 1464 aaPredicted RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms