RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 PCDHAC2Q9Y5I4 1007 aa12.12□□□□□ -0.47
USP54-207ENST00000451492 LRRFIP2Q9Y608 721 aaKnown RBP12.12□□□□□ -0.47
USP54-207ENST00000451492 WNT10BO00744 389 aa12.11□□□□□ -0.47
USP54-207ENST00000451492 IL1R1P14778 569 aa12.11□□□□□ -0.47
USP54-207ENST00000451492 UBE4AQ14139 1066 aa12.11□□□□□ -0.47
USP54-207ENST00000451492 C15orf52Q6ZUT6 534 aaKnown RBP12.11□□□□□ -0.47
USP54-207ENST00000451492 C2orf69Q8N8R5 385 aa12.11□□□□□ -0.47
USP54-207ENST00000451492 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.11□□□□□ -0.47
USP54-207ENST00000451492 AKAP11Q9UKA4 1901 aa12.11□□□□□ -0.47
USP54-207ENST00000451492 FRAT2O75474 233 aaPredicted RBP12.1□□□□□ -0.47
USP54-207ENST00000451492 TRIM27P14373 513 aa12.1□□□□□ -0.47
USP54-207ENST00000451492 HIBADHP31937 336 aaKnown RBP12.1□□□□□ -0.47
USP54-207ENST00000451492 RBM5P52756 815 aaKnown RBP eCLIP12.1□□□□□ -0.47
USP54-207ENST00000451492 TSKSQ9UJT2 592 aa12.1□□□□□ -0.47
USP54-207ENST00000451492 PA2G4Q9UQ80 394 aaKnown RBP12.1□□□□□ -0.47
USP54-207ENST00000451492 PITPNM2Q9BZ72 1349 aa12.1□□□□□ -0.47
USP54-207ENST00000451492 OTOFQ9HC10 1997 aa12.09□□□□□ -0.47
USP54-207ENST00000451492 CLRN2A0PK11 232 aa12.09□□□□□ -0.47
USP54-207ENST00000451492 PDE8BO95263 885 aa12.09□□□□□ -0.47
USP54-207ENST00000451492 RFX5P48382 616 aaPredicted RBP12.09□□□□□ -0.47
USP54-207ENST00000451492 BRPF1P55201 1214 aaPredicted RBP12.09□□□□□ -0.47
USP54-207ENST00000451492 PTPN12Q05209 780 aaKnown RBP12.09□□□□□ -0.47
USP54-207ENST00000451492 PRKG1Q13976 671 aa12.09□□□□□ -0.47
USP54-207ENST00000451492 TTLL12Q14166 644 aaPredicted RBP12.09□□□□□ -0.47
USP54-207ENST00000451492 DLGAP5Q15398 846 aa12.09□□□□□ -0.47
USP54-207ENST00000451492 CFAP100Q494V2 611 aa12.09□□□□□ -0.47
USP54-207ENST00000451492 MFSD14BQ5SR56 506 aa12.09□□□□□ -0.47
USP54-207ENST00000451492 MOB2Q70IA6 237 aa12.09□□□□□ -0.47
USP54-207ENST00000451492 VGLL2Q8N8G2 317 aa12.09□□□□□ -0.47
USP54-207ENST00000451492 FAM84BQ96KN1 310 aaPredicted RBP12.09□□□□□ -0.47
USP54-207ENST00000451492 EYA2O00167 538 aa12.08□□□□□ -0.48
USP54-207ENST00000451492 IPO8O15397 1037 aaKnown RBP12.08□□□□□ -0.48
USP54-207ENST00000451492 CAPN15O75808 1086 aa12.08□□□□□ -0.48
USP54-207ENST00000451492 ZNF157P51786 506 aaPredicted RBP12.08□□□□□ -0.48
USP54-207ENST00000451492 MAP2K1Q02750 393 aaPredicted RBP12.08□□□□□ -0.48
USP54-207ENST00000451492 PUM3Q15397 648 aaKnown RBP12.08□□□□□ -0.48
USP54-207ENST00000451492 CAVIN4Q5BKX8 364 aa12.08□□□□□ -0.48
USP54-207ENST00000451492 ATF7IPQ6VMQ6 1270 aa12.08□□□□□ -0.48
USP54-207ENST00000451492 BEGAINQ9BUH8 593 aa12.08□□□□□ -0.48
USP54-207ENST00000451492 VEZTQ9HBM0 779 aa12.08□□□□□ -0.48
USP54-207ENST00000451492 WBP1LQ9NX94 342 aa12.08□□□□□ -0.48
USP54-207ENST00000451492 AOX1Q06278 1338 aa12.08□□□□□ -0.48
USP54-207ENST00000451492 ZBED9Q6R2W3 1325 aa12.08□□□□□ -0.48
USP54-207ENST00000451492 IFIT1P09914 478 aaKnown RBP12.07□□□□□ -0.48
USP54-207ENST00000451492 SLC5A1P13866 664 aa12.07□□□□□ -0.48
USP54-207ENST00000451492 BCAMP50895 628 aa12.07□□□□□ -0.48
USP54-207ENST00000451492 LBX1P52954 281 aa12.07□□□□□ -0.48
USP54-207ENST00000451492 IFFO2Q5TF58 517 aa12.07□□□□□ -0.48
USP54-207ENST00000451492 ZKSCAN2Q63HK3 967 aa12.07□□□□□ -0.48
USP54-207ENST00000451492 INTS3Q68E01 1043 aaKnown RBP12.07□□□□□ -0.48
USP54-207ENST00000451492 RGMBQ6NW40 437 aa12.07□□□□□ -0.48
USP54-207ENST00000451492 APOBEC3FQ8IUX4 373 aaKnown RBP12.07□□□□□ -0.48
USP54-207ENST00000451492 TNS4Q8IZW8 715 aa12.07□□□□□ -0.48
USP54-207ENST00000451492 TMEM57Q8N5G2 664 aa12.07□□□□□ -0.48
USP54-207ENST00000451492 TDRD7Q8NHU6 1098 aaKnown RBP12.07□□□□□ -0.48
USP54-207ENST00000451492 ARHGAP45Q92619 1136 aa12.07□□□□□ -0.48
USP54-207ENST00000451492 ZIC5Q96T25 663 aa12.07□□□□□ -0.48
USP54-207ENST00000451492 TTF2Q9UNY4 1162 aaKnown RBP12.07□□□□□ -0.48
USP54-207ENST00000451492 FZD1Q9UP38 647 aa12.07□□□□□ -0.48
USP54-207ENST00000451492 AK9Q5TCS8 1911 aa12.06□□□□□ -0.48
USP54-207ENST00000451492 SRGAP3O43295 1099 aa12.06□□□□□ -0.48
USP54-207ENST00000451492 GNAI3P08754 354 aa12.06□□□□□ -0.48
USP54-207ENST00000451492 CTCFP49711 727 aaPredicted RBP12.06□□□□□ -0.48
USP54-207ENST00000451492 GRIK5Q16478 980 aa12.06□□□□□ -0.48
USP54-207ENST00000451492 ATP2B3Q16720 1220 aa12.06□□□□□ -0.48
USP54-207ENST00000451492 ATG9AQ7Z3C6 839 aa12.06□□□□□ -0.48
USP54-207ENST00000451492 FTSJ3Q8IY81 847 aaKnown RBP12.06□□□□□ -0.48
USP54-207ENST00000451492 HHIPL1Q96JK4 782 aa12.06□□□□□ -0.48
USP54-207ENST00000451492 CASP8AP2Q9UKL3 1982 aa12.06□□□□□ -0.48
USP54-207ENST00000451492 COL1A1P02452 1464 aaPredicted RBP12.06□□□□□ -0.48
USP54-207ENST00000451492 FAM205AQ6ZU69 1335 aa12.06□□□□□ -0.48
USP54-207ENST00000451492 MYH2Q9UKX2 1941 aa12.05□□□□□ -0.48
USP54-207ENST00000451492 UBE2Q2LH0YL09 131 aa12.05□□□□□ -0.48
USP54-207ENST00000451492 MYO1BO43795 1136 aa12.05□□□□□ -0.48
USP54-207ENST00000451492 HSPA8P11142 646 aaKnown RBP12.05□□□□□ -0.48
USP54-207ENST00000451492 NF2P35240 595 aa12.05□□□□□ -0.48
USP54-207ENST00000451492 FKBP1AP62942 108 aaKnown RBP12.05□□□□□ -0.48
USP54-207ENST00000451492 MKRN3Q13064 507 aaKnown RBP12.05□□□□□ -0.48
USP54-207ENST00000451492 FBXO33Q7Z6M2 555 aa12.05□□□□□ -0.48
USP54-207ENST00000451492 C1orf115Q9H7X2 142 aa12.05□□□□□ -0.48
USP54-207ENST00000451492 HDAC5Q9UQL6 1122 aa12.05□□□□□ -0.48
USP54-207ENST00000451492 SPDYE2BA6NHP3 402 aa12.04□□□□□ -0.48
USP54-207ENST00000451492 SPDYE6P0CI01 402 aa12.04□□□□□ -0.48
USP54-207ENST00000451492 FGFR2P21802 821 aa12.04□□□□□ -0.48
USP54-207ENST00000451492 MAP2K2P36507 400 aa12.04□□□□□ -0.48
USP54-207ENST00000451492 NOGQ13253 232 aa12.04□□□□□ -0.48
USP54-207ENST00000451492 ITPRIPQ8IWB1 547 aa12.04□□□□□ -0.48
USP54-207ENST00000451492 ZBED3Q96IU2 234 aaPredicted RBP12.04□□□□□ -0.48
USP54-207ENST00000451492 PRMT6Q96LA8 375 aaPredicted RBP12.04□□□□□ -0.48
USP54-207ENST00000451492 CEP126Q9P2H0 1117 aa12.04□□□□□ -0.48
USP54-207ENST00000451492 SSC5DA1L4H1 1573 aa12.04□□□□□ -0.48
USP54-207ENST00000451492 FAM155AB1AL88 458 aaPredicted RBP12.03□□□□□ -0.48
USP54-207ENST00000451492 CIAO1O76071 339 aa12.03□□□□□ -0.48
USP54-207ENST00000451492 GNAI2P04899 355 aa12.03□□□□□ -0.48
USP54-207ENST00000451492 SLC10A3P09131 477 aa12.03□□□□□ -0.48
USP54-207ENST00000451492 ADORA1P30542 326 aa12.03□□□□□ -0.48
USP54-207ENST00000451492 CRKP46108 304 aa12.03□□□□□ -0.48
USP54-207ENST00000451492 MMP14P50281 582 aa12.03□□□□□ -0.48
USP54-207ENST00000451492 RASAL3Q86YV0 1011 aa12.03□□□□□ -0.48
USP54-207ENST00000451492 LPIN2Q92539 896 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms