RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 JAG2Q9Y219 1238 aa34.28■■■■□ 3.08
USP42-204ENST00000451154 F8W031 263 aaPredicted RBP34.26■■■■□ 3.08
USP42-204ENST00000451154 NF2P35240 595 aa34.26■■■■□ 3.08
USP42-204ENST00000451154 DLGAP5Q15398 846 aa34.26■■■■□ 3.08
USP42-204ENST00000451154 PUS3Q9BZE2 481 aaKnown RBP34.26■■■■□ 3.08
USP42-204ENST00000451154 DGKZQ13574 1117 aa34.25■■■■□ 3.07
USP42-204ENST00000451154 APOBEC3FQ8IUX4 373 aaKnown RBP34.25■■■■□ 3.07
USP42-204ENST00000451154 PCDHAC2Q9Y5I4 1007 aa34.25■■■■□ 3.07
USP42-204ENST00000451154 PRKG1Q13976 671 aa34.24■■■■□ 3.07
USP42-204ENST00000451154 E9PSI1 815 aa34.23■■■■□ 3.07
USP42-204ENST00000451154 UTYO14607 1347 aa34.23■■■■□ 3.07
USP42-204ENST00000451154 REM2Q8IYK8 340 aaPredicted RBP34.22■■■■□ 3.07
USP42-204ENST00000451154 SSH1Q8WYL5 1049 aa34.21■■■■□ 3.07
USP42-204ENST00000451154 BICC1Q9H694 974 aaKnown RBP34.21■■■■□ 3.07
USP42-204ENST00000451154 FKBP1AP62942 108 aaKnown RBP34.2■■■■□ 3.07
USP42-204ENST00000451154 SLFN5Q08AF3 891 aa34.2■■■■□ 3.07
USP42-204ENST00000451154 UBE4AQ14139 1066 aa34.2■■■■□ 3.07
USP42-204ENST00000451154 CFAP100Q494V2 611 aa34.2■■■■□ 3.07
USP42-204ENST00000451154 MTMR14Q8NCE2 650 aa34.2■■■■□ 3.07
USP42-204ENST00000451154 DEFB129Q9H1M3 183 aa34.2■■■■□ 3.07
USP42-204ENST00000451154 RIPOR2Q9Y4F9 1068 aa34.2■■■■□ 3.07
USP42-204ENST00000451154 GYG1P46976 350 aa34.19■■■■□ 3.06
USP42-204ENST00000451154 PTPN12Q05209 780 aaKnown RBP34.19■■■■□ 3.06
USP42-204ENST00000451154 MKRN3Q13064 507 aaKnown RBP34.18■■■■□ 3.06
USP42-204ENST00000451154 ARMC9Q7Z3E5 817 aa34.18■■■■□ 3.06
USP42-204ENST00000451154 PRMT6Q96LA8 375 aaPredicted RBP34.18■■■■□ 3.06
USP42-204ENST00000451154 PTPRCP08575 1304 aa34.18■■■■□ 3.06
USP42-204ENST00000451154 HIBADHP31937 336 aaKnown RBP34.17■■■■□ 3.06
USP42-204ENST00000451154 ANKRD44Q8N8A2 993 aa34.17■■■■□ 3.06
USP42-204ENST00000451154 TDRD7Q8NHU6 1098 aaKnown RBP34.17■■■■□ 3.06
USP42-204ENST00000451154 CDCA7LQ96GN5 454 aa34.17■■■■□ 3.06
USP42-204ENST00000451154 FAM84BQ96KN1 310 aaPredicted RBP34.17■■■■□ 3.06
USP42-204ENST00000451154 FZD1Q9UP38 647 aa34.17■■■■□ 3.06
USP42-204ENST00000451154 CLRN2A0PK11 232 aa34.16■■■■□ 3.06
USP42-204ENST00000451154 RABL6Q3YEC7 729 aaPredicted RBP34.16■■■■□ 3.06
USP42-204ENST00000451154 AOX1Q06278 1338 aa34.15■■■■□ 3.06
USP42-204ENST00000451154 FAM205AQ6ZU69 1335 aa34.15■■■■□ 3.06
USP42-204ENST00000451154 SPDYE2BA6NHP3 402 aa34.15■■■■□ 3.06
USP42-204ENST00000451154 SPDYE6P0CI01 402 aa34.15■■■■□ 3.06
USP42-204ENST00000451154 RBM5P52756 815 aaKnown RBP eCLIP34.15■■■■□ 3.06
USP42-204ENST00000451154 ANGEL1Q9UNK9 670 aaKnown RBP34.15■■■■□ 3.06
USP42-204ENST00000451154 MROH5Q6ZUA9 1318 aa34.14■■■■□ 3.06
USP42-204ENST00000451154 LRRC24Q50LG9 513 aa34.14■■■■□ 3.06
USP42-204ENST00000451154 MYO1BO43795 1136 aa34.13■■■■□ 3.05
USP42-204ENST00000451154 LDLRAD1Q5T700 205 aa34.13■■■■□ 3.05
USP42-204ENST00000451154 USP44Q9H0E7 712 aa34.13■■■■□ 3.05
USP42-204ENST00000451154 MFSD14BQ5SR56 506 aa34.12■■■■□ 3.05
USP42-204ENST00000451154 VEZTQ9HBM0 779 aa34.12■■■■□ 3.05
USP42-204ENST00000451154 TM4SF4P48230 202 aa34.11■■■■□ 3.05
USP42-204ENST00000451154 KLHDC4Q8TBB5 520 aa34.11■■■■□ 3.05
USP42-204ENST00000451154 ZBTB4Q9P1Z0 1013 aaPredicted RBP34.11■■■■□ 3.05
USP42-204ENST00000451154 TBC1D8O95759 1140 aa34.1■■■■□ 3.05
USP42-204ENST00000451154 METTL24Q5JXM2 366 aa34.1■■■■□ 3.05
USP42-204ENST00000451154 TTF2Q9UNY4 1162 aaKnown RBP34.1■■■■□ 3.05
USP42-204ENST00000451154 ECM29Q5VYK3 1845 aa34.09■■■■□ 3.05
USP42-204ENST00000451154 IQSEC3Q9UPP2 1182 aaPredicted RBP34.09■■■■□ 3.05
USP42-204ENST00000451154 PPP2R3BQ9Y5P8 575 aa34.09■■■■□ 3.05
USP42-204ENST00000451154 COL1A1P02452 1464 aaPredicted RBP34.08■■■■□ 3.05
USP42-204ENST00000451154 FBXO33Q7Z6M2 555 aa34.08■■■■□ 3.05
USP42-204ENST00000451154 VPS37DQ86XT2 251 aa34.08■■■■□ 3.05
USP42-204ENST00000451154 ALDH1L2Q3SY69 923 aa34.07■■■■□ 3.04
USP42-204ENST00000451154 NBPF12Q5TAG4 269 aaPredicted RBP34.07■■■■□ 3.04
USP42-204ENST00000451154 SLC10A4Q96EP9 437 aa34.07■■■■□ 3.04
USP42-204ENST00000451154 RGS19P49795 217 aa34.06■■■■□ 3.04
USP42-204ENST00000451154 SUPT20HL1Q3ZLR7 823 aa34.06■■■■□ 3.04
USP42-204ENST00000451154 SPRYD7Q5W111 196 aa34.06■■■■□ 3.04
USP42-204ENST00000451154 SMC4Q9NTJ3 1288 aa34.06■■■■□ 3.04
USP42-204ENST00000451154 PPP1R12BO60237 982 aaPredicted RBP34.05■■■■□ 3.04
USP42-204ENST00000451154 PDE8BO95263 885 aa34.05■■■■□ 3.04
USP42-204ENST00000451154 RASA3Q14644 834 aa34.05■■■■□ 3.04
USP42-204ENST00000451154 TRMT2AQ8IZ69 625 aaKnown RBP34.05■■■■□ 3.04
USP42-204ENST00000451154 VGLL2Q8N8G2 317 aa34.05■■■■□ 3.04
USP42-204ENST00000451154 SERPINA10Q9UK55 444 aa34.05■■■■□ 3.04
USP42-204ENST00000451154 CHAF1AQ13111 956 aaPredicted RBP34.04■■■■□ 3.04
USP42-204ENST00000451154 GRIK5Q16478 980 aa34.04■■■■□ 3.04
USP42-204ENST00000451154 MAP3K11Q16584 847 aa34.04■■■■□ 3.04
USP42-204ENST00000451154 CTU1Q7Z7A3 348 aaKnown RBP34.04■■■■□ 3.04
USP42-204ENST00000451154 CLMNQ96JQ2 1002 aa34.04■■■■□ 3.04
USP42-204ENST00000451154 TDRD3Q9H7E2 651 aaKnown RBP34.04■■■■□ 3.04
USP42-204ENST00000451154 ZNF70Q9UC06 446 aaPredicted RBP34.04■■■■□ 3.04
USP42-204ENST00000451154 SSC5DA1L4H1 1573 aa34.03■■■■□ 3.04
USP42-204ENST00000451154 SREBF2Q12772 1141 aa34.03■■■■□ 3.04
USP42-204ENST00000451154 CAVIN4Q5BKX8 364 aa34.03■■■■□ 3.04
USP42-204ENST00000451154 FRAT2O75474 233 aaPredicted RBP34.02■■■■□ 3.04
USP42-204ENST00000451154 MLLT1Q03111 559 aaPredicted RBP34.02■■■■□ 3.04
USP42-204ENST00000451154 DZIP1LQ8IYY4 767 aaKnown RBP34.02■■■■□ 3.04
USP42-204ENST00000451154 BCAMP50895 628 aa34.01■■■■□ 3.03
USP42-204ENST00000451154 SPDYE2Q495Y8 402 aa34.01■■■■□ 3.03
USP42-204ENST00000451154 ZNF296Q8WUU4 475 aaPredicted RBP34.01■■■■□ 3.03
USP42-204ENST00000451154 USP2O75604 605 aaPredicted RBP34■■■■□ 3.03
USP42-204ENST00000451154 CRKP46108 304 aa34■■■■□ 3.03
USP42-204ENST00000451154 RFX5P48382 616 aaPredicted RBP33.99■■■■□ 3.03
USP42-204ENST00000451154 R3HDMLQ9H3Y0 253 aa33.99■■■■□ 3.03
USP42-204ENST00000451154 NOB1Q9ULX3 412 aaKnown RBP33.99■■■■□ 3.03
USP42-204ENST00000451154 GPR25O00155 361 aa33.97■■■■□ 3.03
USP42-204ENST00000451154 IREB2P48200 963 aaKnown RBP33.97■■■■□ 3.03
USP42-204ENST00000451154 WNK4Q96J92 1243 aa33.97■■■■□ 3.03
USP42-204ENST00000451154 TCP10L2B9ZVM9 353 aa33.96■■■■□ 3.03
USP42-204ENST00000451154 EYA2O00167 538 aa33.96■■■■□ 3.03
USP42-204ENST00000451154 FGFR2P21802 821 aa33.96■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms