RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 RGS19P49795 217 aa12.54□□□□□ -0.4
LINC01238-204ENST00000451070 SLC4A10Q6U841 1118 aa12.54□□□□□ -0.4
LINC01238-204ENST00000451070 LDHAL6AQ6ZMR3 332 aa12.54□□□□□ -0.4
LINC01238-204ENST00000451070 APOBEC3FQ8IUX4 373 aaKnown RBP12.54□□□□□ -0.4
LINC01238-204ENST00000451070 KAZALD1Q96I82 304 aa12.54□□□□□ -0.4
LINC01238-204ENST00000451070 SUCLG2Q96I99 432 aa12.54□□□□□ -0.4
LINC01238-204ENST00000451070 C9orf78Q9NZ63 289 aaPredicted RBP12.54□□□□□ -0.4
LINC01238-204ENST00000451070 PCDHAC2Q9Y5I4 1007 aa12.54□□□□□ -0.4
LINC01238-204ENST00000451070 TTLL12Q14166 644 aaPredicted RBP12.53□□□□□ -0.4
LINC01238-204ENST00000451070 CCDC57Q2TAC2 916 aa12.53□□□□□ -0.4
LINC01238-204ENST00000451070 ZNF804AQ7Z570 1209 aa12.53□□□□□ -0.4
LINC01238-204ENST00000451070 REM2Q8IYK8 340 aaPredicted RBP12.53□□□□□ -0.4
LINC01238-204ENST00000451070 MTMR14Q8NCE2 650 aa12.53□□□□□ -0.4
LINC01238-204ENST00000451070 SRCIN1Q9C0H9 1055 aa12.53□□□□□ -0.4
LINC01238-204ENST00000451070 PLIN1O60240 522 aa12.52□□□□□ -0.41
LINC01238-204ENST00000451070 NBPF7P0C2Y1 421 aaPredicted RBP12.52□□□□□ -0.41
LINC01238-204ENST00000451070 NF2P35240 595 aa12.52□□□□□ -0.41
LINC01238-204ENST00000451070 FKBP1AP62942 108 aaKnown RBP12.52□□□□□ -0.41
LINC01238-204ENST00000451070 PTPN12Q05209 780 aaKnown RBP12.52□□□□□ -0.41
LINC01238-204ENST00000451070 DLGAP5Q15398 846 aa12.52□□□□□ -0.41
LINC01238-204ENST00000451070 PUS3Q9BZE2 481 aaKnown RBP12.52□□□□□ -0.41
LINC01238-204ENST00000451070 CNNM1Q9NRU3 951 aa12.52□□□□□ -0.41
LINC01238-204ENST00000451070 FZD1Q9UP38 647 aa12.52□□□□□ -0.41
LINC01238-204ENST00000451070 JAG2Q9Y219 1238 aa12.52□□□□□ -0.41
LINC01238-204ENST00000451070 UTYO14607 1347 aa12.52□□□□□ -0.41
LINC01238-204ENST00000451070 AOX1Q06278 1338 aa12.52□□□□□ -0.41
LINC01238-204ENST00000451070 COL1A1P02452 1464 aaPredicted RBP12.52□□□□□ -0.41
LINC01238-204ENST00000451070 SSC5DA1L4H1 1573 aa12.52□□□□□ -0.41
LINC01238-204ENST00000451070 ARAP2Q8WZ64 1704 aa12.51□□□□□ -0.41
LINC01238-204ENST00000451070 F8W031 263 aaPredicted RBP12.51□□□□□ -0.41
LINC01238-204ENST00000451070 PRKG1Q13976 671 aa12.51□□□□□ -0.41
LINC01238-204ENST00000451070 TAF7LQ5H9L4 462 aa12.51□□□□□ -0.41
LINC01238-204ENST00000451070 LDLRAD1Q5T700 205 aa12.51□□□□□ -0.41
LINC01238-204ENST00000451070 MRPL50Q8N5N7 158 aaKnown RBP12.51□□□□□ -0.41
LINC01238-204ENST00000451070 DEFB129Q9H1M3 183 aa12.51□□□□□ -0.41
LINC01238-204ENST00000451070 SPDYE2BA6NHP3 402 aa12.5□□□□□ -0.41
LINC01238-204ENST00000451070 SPDYE6P0CI01 402 aa12.5□□□□□ -0.41
LINC01238-204ENST00000451070 TM4SF4P48230 202 aa12.5□□□□□ -0.41
LINC01238-204ENST00000451070 MKRN3Q13064 507 aaKnown RBP12.5□□□□□ -0.41
LINC01238-204ENST00000451070 UBE4AQ14139 1066 aa12.5□□□□□ -0.41
LINC01238-204ENST00000451070 CFAP100Q494V2 611 aa12.5□□□□□ -0.41
LINC01238-204ENST00000451070 ARMC9Q7Z3E5 817 aa12.5□□□□□ -0.41
LINC01238-204ENST00000451070 TDRD7Q8NHU6 1098 aaKnown RBP12.5□□□□□ -0.41
LINC01238-204ENST00000451070 FAM84BQ96KN1 310 aaPredicted RBP12.5□□□□□ -0.41
LINC01238-204ENST00000451070 PRMT6Q96LA8 375 aaPredicted RBP12.5□□□□□ -0.41
LINC01238-204ENST00000451070 RIPOR2Q9Y4F9 1068 aa12.5□□□□□ -0.41
LINC01238-204ENST00000451070 FAM205AQ6ZU69 1335 aa12.5□□□□□ -0.41
LINC01238-204ENST00000451070 LAMB1P07942 1786 aa12.5□□□□□ -0.41
LINC01238-204ENST00000451070 CLRN2A0PK11 232 aa12.49□□□□□ -0.41
LINC01238-204ENST00000451070 GYG1P46976 350 aa12.49□□□□□ -0.41
LINC01238-204ENST00000451070 MLLT1Q03111 559 aaPredicted RBP12.49□□□□□ -0.41
LINC01238-204ENST00000451070 RABL6Q3YEC7 729 aaPredicted RBP12.49□□□□□ -0.41
LINC01238-204ENST00000451070 ANKRD44Q8N8A2 993 aa12.49□□□□□ -0.41
LINC01238-204ENST00000451070 BICC1Q9H694 974 aaKnown RBP12.49□□□□□ -0.41
LINC01238-204ENST00000451070 ANGEL1Q9UNK9 670 aaKnown RBP12.49□□□□□ -0.41
LINC01238-204ENST00000451070 TBC1D8O95759 1140 aa12.48□□□□□ -0.41
LINC01238-204ENST00000451070 MAP3K11Q16584 847 aa12.48□□□□□ -0.41
LINC01238-204ENST00000451070 SPRYD7Q5W111 196 aa12.48□□□□□ -0.41
LINC01238-204ENST00000451070 CTU1Q7Z7A3 348 aaKnown RBP12.48□□□□□ -0.41
LINC01238-204ENST00000451070 POTEDQ86YR6 584 aa12.48□□□□□ -0.41
LINC01238-204ENST00000451070 SSH1Q8WYL5 1049 aa12.48□□□□□ -0.41
LINC01238-204ENST00000451070 PPP2R3BQ9Y5P8 575 aa12.48□□□□□ -0.41
LINC01238-204ENST00000451070 TNRC18O15417 2968 aaPredicted RBP12.48□□□□□ -0.41
LINC01238-204ENST00000451070 OTOFQ9HC10 1997 aa12.47□□□□□ -0.41
LINC01238-204ENST00000451070 PTPRCP08575 1304 aa12.47□□□□□ -0.41
LINC01238-204ENST00000451070 MROH5Q6ZUA9 1318 aa12.47□□□□□ -0.41
LINC01238-204ENST00000451070 E9PSI1 815 aa12.47□□□□□ -0.41
LINC01238-204ENST00000451070 HIBADHP31937 336 aaKnown RBP12.47□□□□□ -0.41
LINC01238-204ENST00000451070 LRRC24Q50LG9 513 aa12.47□□□□□ -0.41
LINC01238-204ENST00000451070 MFSD14BQ5SR56 506 aa12.47□□□□□ -0.41
LINC01238-204ENST00000451070 FBXO33Q7Z6M2 555 aa12.47□□□□□ -0.41
LINC01238-204ENST00000451070 VGLL2Q8N8G2 317 aa12.47□□□□□ -0.41
LINC01238-204ENST00000451070 ZNF296Q8WUU4 475 aaPredicted RBP12.47□□□□□ -0.41
LINC01238-204ENST00000451070 CLMNQ96JQ2 1002 aa12.47□□□□□ -0.41
LINC01238-204ENST00000451070 R3HDMLQ9H3Y0 253 aa12.47□□□□□ -0.41
LINC01238-204ENST00000451070 VEZTQ9HBM0 779 aa12.47□□□□□ -0.41
LINC01238-204ENST00000451070 MYO1BO43795 1136 aa12.46□□□□□ -0.41
LINC01238-204ENST00000451070 RBM5P52756 815 aaKnown RBP eCLIP12.46□□□□□ -0.41
LINC01238-204ENST00000451070 SLFN5Q08AF3 891 aa12.46□□□□□ -0.41
LINC01238-204ENST00000451070 SREBF2Q12772 1141 aa12.46□□□□□ -0.41
LINC01238-204ENST00000451070 GRIK5Q16478 980 aa12.46□□□□□ -0.41
LINC01238-204ENST00000451070 SPDYE2Q495Y8 402 aa12.46□□□□□ -0.41
LINC01238-204ENST00000451070 NOM1Q5C9Z4 860 aaKnown RBP12.46□□□□□ -0.41
LINC01238-204ENST00000451070 NBPF12Q5TAG4 269 aaPredicted RBP12.46□□□□□ -0.41
LINC01238-204ENST00000451070 CFHR5Q9BXR6 569 aa12.46□□□□□ -0.41
LINC01238-204ENST00000451070 USP44Q9H0E7 712 aa12.46□□□□□ -0.41
LINC01238-204ENST00000451070 TTF2Q9UNY4 1162 aaKnown RBP12.46□□□□□ -0.41
LINC01238-204ENST00000451070 GPR25O00155 361 aa12.45□□□□□ -0.42
LINC01238-204ENST00000451070 PPP1R12BO60237 982 aaPredicted RBP12.45□□□□□ -0.42
LINC01238-204ENST00000451070 RASA3Q14644 834 aa12.45□□□□□ -0.42
LINC01238-204ENST00000451070 SUPT20HL1Q3ZLR7 823 aa12.45□□□□□ -0.42
LINC01238-204ENST00000451070 KLHDC4Q8TBB5 520 aa12.45□□□□□ -0.42
LINC01238-204ENST00000451070 SLC10A4Q96EP9 437 aa12.45□□□□□ -0.42
LINC01238-204ENST00000451070 WNK4Q96J92 1243 aa12.45□□□□□ -0.42
LINC01238-204ENST00000451070 ZNF70Q9UC06 446 aaPredicted RBP12.45□□□□□ -0.42
LINC01238-204ENST00000451070 SERPINA10Q9UK55 444 aa12.45□□□□□ -0.42
LINC01238-204ENST00000451070 PDE4DIPQ5VU43 2346 aa12.45□□□□□ -0.42
LINC01238-204ENST00000451070 USP2O75604 605 aaPredicted RBP12.44□□□□□ -0.42
LINC01238-204ENST00000451070 PDE8BO95263 885 aa12.44□□□□□ -0.42
LINC01238-204ENST00000451070 GJA5P36382 358 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms