RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 CCDC158Q5M9N0 1113 aa15.97■□□□□ 0.15
VPS33A-202ENST00000451053 TTC39AQ5SRH9 613 aa15.97■□□□□ 0.15
VPS33A-202ENST00000451053 DACT2Q5SW24 774 aa15.97■□□□□ 0.15
VPS33A-202ENST00000451053 TTLL5Q6EMB2 1281 aa15.97■□□□□ 0.15
VPS33A-202ENST00000451053 GPC2Q8N158 579 aa15.97■□□□□ 0.15
VPS33A-202ENST00000451053 OTUD7AQ8TE49 926 aaPredicted RBP15.97■□□□□ 0.15
VPS33A-202ENST00000451053 MXD3Q9BW11 206 aa15.97■□□□□ 0.15
VPS33A-202ENST00000451053 FAM205AQ6ZU69 1335 aa15.96■□□□□ 0.15
VPS33A-202ENST00000451053 MYH13Q9UKX3 1938 aa15.96■□□□□ 0.15
VPS33A-202ENST00000451053 STRIP1Q5VSL9 837 aa15.96■□□□□ 0.15
VPS33A-202ENST00000451053 DPY19L2Q6NUT2 758 aa15.96■□□□□ 0.15
VPS33A-202ENST00000451053 PI16Q6UXB8 463 aa15.96■□□□□ 0.15
VPS33A-202ENST00000451053 CHD1LQ86WJ1 897 aa15.96■□□□□ 0.15
VPS33A-202ENST00000451053 LNPKQ9C0E8 428 aa15.96■□□□□ 0.15
VPS33A-202ENST00000451053 ZBTB47Q9UFB7 747 aaPredicted RBP15.96■□□□□ 0.15
VPS33A-202ENST00000451053 ZBTB12Q9Y330 459 aaPredicted RBP15.96■□□□□ 0.15
VPS33A-202ENST00000451053 SEMA3EO15041 775 aa15.95■□□□□ 0.14
VPS33A-202ENST00000451053 UQCRFS1P1P0C7P4 283 aa15.95■□□□□ 0.14
VPS33A-202ENST00000451053 MCAMP43121 646 aa15.95■□□□□ 0.14
VPS33A-202ENST00000451053 RSBN1LQ6PCB5 846 aaPredicted RBP15.95■□□□□ 0.14
VPS33A-202ENST00000451053 CERS5Q8N5B7 392 aa15.95■□□□□ 0.14
VPS33A-202ENST00000451053 HMG20BQ9P0W2 317 aa15.95■□□□□ 0.14
VPS33A-202ENST00000451053 DENND2AQ9ULE3 1009 aa15.95■□□□□ 0.14
VPS33A-202ENST00000451053 UTRNP46939 3433 aa15.95■□□□□ 0.14
VPS33A-202ENST00000451053 ZBTB22O15209 634 aa15.94■□□□□ 0.14
VPS33A-202ENST00000451053 YY1P25490 414 aa15.94■□□□□ 0.14
VPS33A-202ENST00000451053 GMPSP49915 693 aaPredicted RBP15.94■□□□□ 0.14
VPS33A-202ENST00000451053 TSHZ3Q63HK5 1081 aa15.94■□□□□ 0.14
VPS33A-202ENST00000451053 SPATA5Q8NB90 893 aa15.94■□□□□ 0.14
VPS33A-202ENST00000451053 ZNF526Q8TF50 670 aaPredicted RBP15.94■□□□□ 0.14
VPS33A-202ENST00000451053 ZNF512BQ96KM6 892 aaPredicted RBP15.94■□□□□ 0.14
VPS33A-202ENST00000451053 SALL3Q9BXA9 1300 aa15.94■□□□□ 0.14
VPS33A-202ENST00000451053 MFSD14BQ5SR56 506 aa15.93■□□□□ 0.14
VPS33A-202ENST00000451053 L3MBTL3Q96JM7 780 aaPredicted RBP15.93■□□□□ 0.14
VPS33A-202ENST00000451053 GMLQ99445 158 aa15.93■□□□□ 0.14
VPS33A-202ENST00000451053 SNRKQ9NRH2 765 aa15.93■□□□□ 0.14
VPS33A-202ENST00000451053 NDUFB9Q9Y6M9 179 aa15.93■□□□□ 0.14
VPS33A-202ENST00000451053 AKAP11Q9UKA4 1901 aa15.93■□□□□ 0.14
VPS33A-202ENST00000451053 WDR90Q96KV7 1748 aa15.93■□□□□ 0.14
VPS33A-202ENST00000451053 PDS5AQ29RF7 1337 aaKnown RBP15.93■□□□□ 0.14
VPS33A-202ENST00000451053 SHTN1A0MZ66 631 aa15.92■□□□□ 0.14
VPS33A-202ENST00000451053 MX1P20591 662 aa15.92■□□□□ 0.14
VPS33A-202ENST00000451053 SCNN1DP51172 638 aa15.92■□□□□ 0.14
VPS33A-202ENST00000451053 FKBP1AP62942 108 aaKnown RBP15.92■□□□□ 0.14
VPS33A-202ENST00000451053 GRIK5Q16478 980 aa15.92■□□□□ 0.14
VPS33A-202ENST00000451053 AGBL3Q8NEM8 1001 aa15.92■□□□□ 0.14
VPS33A-202ENST00000451053 ECHDC1Q9NTX5 307 aa15.92■□□□□ 0.14
VPS33A-202ENST00000451053 POTECB2RU33 542 aa15.91■□□□□ 0.14
VPS33A-202ENST00000451053 ATP5JP18859 108 aa15.91■□□□□ 0.14
VPS33A-202ENST00000451053 RPS12P25398 132 aaKnown RBP15.91■□□□□ 0.14
VPS33A-202ENST00000451053 PDE4AP27815 886 aa15.91■□□□□ 0.14
VPS33A-202ENST00000451053 ZAP70P43403 619 aa15.91■□□□□ 0.14
VPS33A-202ENST00000451053 WDR66Q8TBY9 1149 aa15.91■□□□□ 0.14
VPS33A-202ENST00000451053 TBC1D22AQ8WUA7 517 aa15.91■□□□□ 0.14
VPS33A-202ENST00000451053 GPATCH3Q96I76 525 aa15.91■□□□□ 0.14
VPS33A-202ENST00000451053 MYO3BQ8WXR4 1341 aa15.91■□□□□ 0.14
VPS33A-202ENST00000451053 SALL1Q9NSC2 1324 aa15.91■□□□□ 0.14
VPS33A-202ENST00000451053 F8W031 263 aaPredicted RBP15.9■□□□□ 0.14
VPS33A-202ENST00000451053 TBC1D9Q6ZT07 1266 aa15.9■□□□□ 0.14
VPS33A-202ENST00000451053 KIAA0825Q8IV33 1275 aa15.9■□□□□ 0.14
VPS33A-202ENST00000451053 MICALL2Q8IY33 904 aa15.9■□□□□ 0.14
VPS33A-202ENST00000451053 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.9■□□□□ 0.14
VPS33A-202ENST00000451053 DPF2Q92785 391 aa15.9■□□□□ 0.14
VPS33A-202ENST00000451053 BOLA2Q9H3K6 86 aa15.9■□□□□ 0.14
VPS33A-202ENST00000451053 NMRK2Q9NPI5 230 aa15.9■□□□□ 0.14
VPS33A-202ENST00000451053 GPRC5DQ9NZD1 345 aa15.9■□□□□ 0.14
VPS33A-202ENST00000451053 TTC41PQ6P2S7 1318 aa15.9■□□□□ 0.14
VPS33A-202ENST00000451053 CYP2E1P05181 493 aaPredicted RBP15.89■□□□□ 0.13
VPS33A-202ENST00000451053 PRDX5P30044 214 aa15.89■□□□□ 0.13
VPS33A-202ENST00000451053 EPS15P42566 896 aa15.89■□□□□ 0.13
VPS33A-202ENST00000451053 PDE1AP54750 535 aa15.89■□□□□ 0.13
VPS33A-202ENST00000451053 PLEKHM2Q8IWE5 1019 aa15.89■□□□□ 0.13
VPS33A-202ENST00000451053 PI4K2BQ8TCG2 481 aa15.89■□□□□ 0.13
VPS33A-202ENST00000451053 DNAJC2Q99543 621 aaKnown RBP15.89■□□□□ 0.13
VPS33A-202ENST00000451053 RRAGCQ9HB90 399 aa15.89■□□□□ 0.13
VPS33A-202ENST00000451053 STAP2Q9UGK3 403 aa15.89■□□□□ 0.13
VPS33A-202ENST00000451053 CNOT7Q9UIV1 285 aaKnown RBP15.89■□□□□ 0.13
VPS33A-202ENST00000451053 USP17L8P0C7I0 530 aa15.88■□□□□ 0.13
VPS33A-202ENST00000451053 LMOD1P29536 600 aaPredicted RBP15.88■□□□□ 0.13
VPS33A-202ENST00000451053 EDC3Q96F86 508 aaKnown RBP15.88■□□□□ 0.13
VPS33A-202ENST00000451053 HAUS7Q99871 368 aa15.88■□□□□ 0.13
VPS33A-202ENST00000451053 ANTXR1Q9H6X2 564 aa15.88■□□□□ 0.13
VPS33A-202ENST00000451053 PIH1D3Q9NQM4 214 aaKnown RBP15.88■□□□□ 0.13
VPS33A-202ENST00000451053 ABCF2Q9UG63 623 aa15.88■□□□□ 0.13
VPS33A-202ENST00000451053 HACL1Q9UJ83 578 aa15.88■□□□□ 0.13
VPS33A-202ENST00000451053 SCN4AP35499 1836 aa15.87■□□□□ 0.13
VPS33A-202ENST00000451053 GOLIM4O00461 696 aa15.87■□□□□ 0.13
VPS33A-202ENST00000451053 LDHBP07195 334 aaKnown RBP15.87■□□□□ 0.13
VPS33A-202ENST00000451053 ZNF280AP59817 542 aaPredicted RBP15.87■□□□□ 0.13
VPS33A-202ENST00000451053 SKAP1Q86WV1 359 aa15.87■□□□□ 0.13
VPS33A-202ENST00000451053 ZGPATQ8N5A5 531 aaKnown RBP15.87■□□□□ 0.13
VPS33A-202ENST00000451053 ZNF784Q8NCA9 323 aaPredicted RBP15.87■□□□□ 0.13
VPS33A-202ENST00000451053 TTF2Q9UNY4 1162 aaKnown RBP15.87■□□□□ 0.13
VPS33A-202ENST00000451053 ADAMTSL1Q8N6G6 1762 aa15.87■□□□□ 0.13
VPS33A-202ENST00000451053 IQCA1LA6NCM1 817 aa15.86■□□□□ 0.13
VPS33A-202ENST00000451053 ERC2O15083 957 aa15.86■□□□□ 0.13
VPS33A-202ENST00000451053 GLRX3O76003 335 aaKnown RBP15.86■□□□□ 0.13
VPS33A-202ENST00000451053 EGFRP00533 1210 aa15.86■□□□□ 0.13
VPS33A-202ENST00000451053 SAMD7Q7Z3H4 446 aa15.86■□□□□ 0.13
VPS33A-202ENST00000451053 TRPM4Q8TD43 1214 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms