RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 IGHMBP2P38935 993 aaKnown RBP13□□□□□ -0.33
LINC01004-202ENST00000450686 RGS19P49795 217 aa13□□□□□ -0.33
LINC01004-202ENST00000450686 GTF2IP78347 998 aa13□□□□□ -0.33
LINC01004-202ENST00000450686 FKBP5Q13451 457 aaPredicted RBP13□□□□□ -0.33
LINC01004-202ENST00000450686 SPOCK2Q92563 424 aa13□□□□□ -0.33
LINC01004-202ENST00000450686 SAGE1Q9NXZ1 904 aa13□□□□□ -0.33
LINC01004-202ENST00000450686 HTTP42858 3142 aa12.99□□□□□ -0.33
LINC01004-202ENST00000450686 PITPNM2Q9BZ72 1349 aa12.99□□□□□ -0.33
LINC01004-202ENST00000450686 CHRNDQ07001 517 aa12.99□□□□□ -0.33
LINC01004-202ENST00000450686 CERS5Q8N5B7 392 aa12.99□□□□□ -0.33
LINC01004-202ENST00000450686 F8W031 263 aaPredicted RBP12.98□□□□□ -0.33
LINC01004-202ENST00000450686 KCNJ4P48050 445 aa12.98□□□□□ -0.33
LINC01004-202ENST00000450686 EXOSC9Q06265 439 aaKnown RBP12.98□□□□□ -0.33
LINC01004-202ENST00000450686 EPHA10Q5JZY3 1008 aa12.98□□□□□ -0.33
LINC01004-202ENST00000450686 STRIP1Q5VSL9 837 aa12.98□□□□□ -0.33
LINC01004-202ENST00000450686 TTLL5Q6EMB2 1281 aa12.98□□□□□ -0.33
LINC01004-202ENST00000450686 DNAAF4Q8WXU2 420 aa12.98□□□□□ -0.33
LINC01004-202ENST00000450686 ZNF594Q96JF6 807 aaPredicted RBP12.98□□□□□ -0.33
LINC01004-202ENST00000450686 MPHOSPH8Q99549 860 aa12.98□□□□□ -0.33
LINC01004-202ENST00000450686 COA1Q9GZY4 146 aa12.98□□□□□ -0.33
LINC01004-202ENST00000450686 R3HDMLQ9H3Y0 253 aa12.98□□□□□ -0.33
LINC01004-202ENST00000450686 CHMP3Q9Y3E7 222 aa12.98□□□□□ -0.33
LINC01004-202ENST00000450686 IRS2Q9Y4H2 1338 aa12.97□□□□□ -0.33
LINC01004-202ENST00000450686 PTPN12Q05209 780 aaKnown RBP12.97□□□□□ -0.33
LINC01004-202ENST00000450686 CCDC27Q2M243 656 aa12.97□□□□□ -0.33
LINC01004-202ENST00000450686 OGFOD1Q8N543 542 aa12.97□□□□□ -0.33
LINC01004-202ENST00000450686 PLA2G12BQ9BX93 195 aa12.97□□□□□ -0.33
LINC01004-202ENST00000450686 MRS2Q9HD23 443 aa12.97□□□□□ -0.33
LINC01004-202ENST00000450686 LEMD3Q9Y2U8 911 aa12.97□□□□□ -0.33
LINC01004-202ENST00000450686 CENPFP49454 3210 aa12.97□□□□□ -0.33
LINC01004-202ENST00000450686 SSC5DA1L4H1 1573 aa12.96□□□□□ -0.33
LINC01004-202ENST00000450686 CLRN2A0PK11 232 aa12.96□□□□□ -0.33
LINC01004-202ENST00000450686 PLIN1O60240 522 aa12.96□□□□□ -0.33
LINC01004-202ENST00000450686 CSF1RP07333 972 aa12.96□□□□□ -0.33
LINC01004-202ENST00000450686 FOXO4P98177 505 aa12.96□□□□□ -0.33
LINC01004-202ENST00000450686 CTU1Q7Z7A3 348 aaKnown RBP12.96□□□□□ -0.33
LINC01004-202ENST00000450686 CACNA1FO60840 1977 aa12.96□□□□□ -0.34
LINC01004-202ENST00000450686 VAMP4O75379 141 aa12.95□□□□□ -0.34
LINC01004-202ENST00000450686 FKBP1BP68106 108 aa12.95□□□□□ -0.34
LINC01004-202ENST00000450686 LINS1Q8NG48 757 aa12.95□□□□□ -0.34
LINC01004-202ENST00000450686 ZNF296Q8WUU4 475 aaPredicted RBP12.95□□□□□ -0.34
LINC01004-202ENST00000450686 ZBED3Q96IU2 234 aaPredicted RBP12.95□□□□□ -0.34
LINC01004-202ENST00000450686 CLMNQ96JQ2 1002 aa12.95□□□□□ -0.34
LINC01004-202ENST00000450686 ANKRD2Q9GZV1 360 aa12.95□□□□□ -0.34
LINC01004-202ENST00000450686 MYH16Q9H6N6 1097 aa12.95□□□□□ -0.34
LINC01004-202ENST00000450686 CD209Q9NNX6 404 aa12.95□□□□□ -0.34
LINC01004-202ENST00000450686 ANGEL1Q9UNK9 670 aaKnown RBP12.95□□□□□ -0.34
LINC01004-202ENST00000450686 ECM29Q5VYK3 1845 aa12.95□□□□□ -0.34
LINC01004-202ENST00000450686 IL16Q14005 1332 aa12.94□□□□□ -0.34
LINC01004-202ENST00000450686 MYO3BQ8WXR4 1341 aa12.94□□□□□ -0.34
LINC01004-202ENST00000450686 ANKRD18BA2A2Z9 1011 aa12.94□□□□□ -0.34
LINC01004-202ENST00000450686 LMBR1LQ6UX01 489 aa12.94□□□□□ -0.34
LINC01004-202ENST00000450686 HPS5Q9UPZ3 1129 aa12.94□□□□□ -0.34
LINC01004-202ENST00000450686 SLC34A2O95436 690 aa12.93□□□□□ -0.34
LINC01004-202ENST00000450686 BEND3Q5T5X7 828 aa12.93□□□□□ -0.34
LINC01004-202ENST00000450686 CHMP4AQ9BY43 222 aa12.93□□□□□ -0.34
LINC01004-202ENST00000450686 MKI67P46013 3256 aaKnown RBP12.93□□□□□ -0.34
LINC01004-202ENST00000450686 OTOFQ9HC10 1997 aa12.92□□□□□ -0.34
LINC01004-202ENST00000450686 NF2P35240 595 aa12.92□□□□□ -0.34
LINC01004-202ENST00000450686 IFIT5Q13325 482 aaKnown RBP12.92□□□□□ -0.34
LINC01004-202ENST00000450686 DLGAP5Q15398 846 aa12.92□□□□□ -0.34
LINC01004-202ENST00000450686 CFAP100Q494V2 611 aa12.92□□□□□ -0.34
LINC01004-202ENST00000450686 APOBEC3FQ8IUX4 373 aaKnown RBP12.92□□□□□ -0.34
LINC01004-202ENST00000450686 CDAN1Q8IWY9 1227 aa12.92□□□□□ -0.34
LINC01004-202ENST00000450686 ZNF579Q8NAF0 562 aaKnown RBP12.92□□□□□ -0.34
LINC01004-202ENST00000450686 DEFB129Q9H1M3 183 aa12.92□□□□□ -0.34
LINC01004-202ENST00000450686 TSPYL2Q9H2G4 693 aaPredicted RBP12.92□□□□□ -0.34
LINC01004-202ENST00000450686 VEZTQ9HBM0 779 aa12.92□□□□□ -0.34
LINC01004-202ENST00000450686 HDAC9Q9UKV0 1011 aa12.92□□□□□ -0.34
LINC01004-202ENST00000450686 GPR25O00155 361 aa12.91□□□□□ -0.34
LINC01004-202ENST00000450686 SLC4A10Q6U841 1118 aa12.91□□□□□ -0.34
LINC01004-202ENST00000450686 ARMC9Q7Z3E5 817 aa12.91□□□□□ -0.34
LINC01004-202ENST00000450686 FAM212AQ96EL1 285 aa12.91□□□□□ -0.34
LINC01004-202ENST00000450686 PRMT6Q96LA8 375 aaPredicted RBP12.91□□□□□ -0.34
LINC01004-202ENST00000450686 PUS3Q9BZE2 481 aaKnown RBP12.91□□□□□ -0.34
LINC01004-202ENST00000450686 BRCA2P51587 3418 aa12.91□□□□□ -0.34
LINC01004-202ENST00000450686 GYG1P46976 350 aa12.9□□□□□ -0.34
LINC01004-202ENST00000450686 TM4SF4P48230 202 aa12.9□□□□□ -0.34
LINC01004-202ENST00000450686 GRIK5Q16478 980 aa12.9□□□□□ -0.34
LINC01004-202ENST00000450686 TAF7LQ5H9L4 462 aa12.9□□□□□ -0.34
LINC01004-202ENST00000450686 LDLRAD1Q5T700 205 aa12.9□□□□□ -0.34
LINC01004-202ENST00000450686 NBPF12Q5TAG4 269 aaPredicted RBP12.9□□□□□ -0.34
LINC01004-202ENST00000450686 SPRYD7Q5W111 196 aa12.9□□□□□ -0.34
LINC01004-202ENST00000450686 CNNM1Q9NRU3 951 aa12.9□□□□□ -0.34
LINC01004-202ENST00000450686 IQSEC3Q9UPP2 1182 aaPredicted RBP12.9□□□□□ -0.34
LINC01004-202ENST00000450686 GRM8O00222 908 aa12.89□□□□□ -0.35
LINC01004-202ENST00000450686 IL1R1P14778 569 aa12.89□□□□□ -0.35
LINC01004-202ENST00000450686 GJA5P36382 358 aa12.89□□□□□ -0.35
LINC01004-202ENST00000450686 RBM5P52756 815 aaKnown RBP eCLIP12.89□□□□□ -0.35
LINC01004-202ENST00000450686 LDHAL6AQ6ZMR3 332 aa12.89□□□□□ -0.35
LINC01004-202ENST00000450686 ZNF804AQ7Z570 1209 aa12.89□□□□□ -0.35
LINC01004-202ENST00000450686 WDR63Q8IWG1 891 aa12.89□□□□□ -0.35
LINC01004-202ENST00000450686 FAM9BQ8IZU0 186 aa12.89□□□□□ -0.35
LINC01004-202ENST00000450686 SUCLG2Q96I99 432 aa12.89□□□□□ -0.35
LINC01004-202ENST00000450686 ARAP2Q8WZ64 1704 aa12.88□□□□□ -0.35
LINC01004-202ENST00000450686 IGF2BP3O00425 579 aaKnown RBP eCLIP12.88□□□□□ -0.35
LINC01004-202ENST00000450686 SREBF2Q12772 1141 aa12.88□□□□□ -0.35
LINC01004-202ENST00000450686 C15orf52Q6ZUT6 534 aaKnown RBP12.88□□□□□ -0.35
LINC01004-202ENST00000450686 SLC10A4Q96EP9 437 aa12.88□□□□□ -0.35
LINC01004-202ENST00000450686 KAZALD1Q96I82 304 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms