RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 ZBED3Q96IU2 234 aaPredicted RBP20.07■□□□□ 0.8
SGCE-208ENST00000450385 NBPF9Q3BBW0 867 aa20.06■□□□□ 0.8
SGCE-208ENST00000450385 CAVIN4Q5BKX8 364 aa20.06■□□□□ 0.8
SGCE-208ENST00000450385 METTL24Q5JXM2 366 aa20.06■□□□□ 0.8
SGCE-208ENST00000450385 KIAA0825Q8IV33 1275 aa20.06■□□□□ 0.8
SGCE-208ENST00000450385 FAM84BQ96KN1 310 aaPredicted RBP20.06■□□□□ 0.8
SGCE-208ENST00000450385 ECM29Q5VYK3 1845 aa20.05■□□□□ 0.8
SGCE-208ENST00000450385 SNAP23O00161 211 aa20.05■□□□□ 0.8
SGCE-208ENST00000450385 MYO1BO43795 1136 aa20.05■□□□□ 0.8
SGCE-208ENST00000450385 NF2P35240 595 aa20.05■□□□□ 0.8
SGCE-208ENST00000450385 DLGAP5Q15398 846 aa20.05■□□□□ 0.8
SGCE-208ENST00000450385 INTS3Q68E01 1043 aaKnown RBP20.05■□□□□ 0.8
SGCE-208ENST00000450385 FBXO33Q7Z6M2 555 aa20.05■□□□□ 0.8
SGCE-208ENST00000450385 PUS3Q9BZE2 481 aaKnown RBP20.05■□□□□ 0.8
SGCE-208ENST00000450385 COL1A1P02452 1464 aaPredicted RBP20.05■□□□□ 0.8
SGCE-208ENST00000450385 GNAI3P08754 354 aa20.04■□□□□ 0.8
SGCE-208ENST00000450385 VPS37DQ86XT2 251 aa20.04■□□□□ 0.8
SGCE-208ENST00000450385 TNS4Q8IZW8 715 aa20.04■□□□□ 0.8
SGCE-208ENST00000450385 VGLL2Q8N8G2 317 aa20.04■□□□□ 0.8
SGCE-208ENST00000450385 TBC1D22AQ8WUA7 517 aa20.04■□□□□ 0.8
SGCE-208ENST00000450385 MXD3Q9BW11 206 aa20.04■□□□□ 0.8
SGCE-208ENST00000450385 PPP2R3BQ9Y5P8 575 aa20.04■□□□□ 0.8
SGCE-208ENST00000450385 PAPPA2Q9BXP8 1791 aa20.03■□□□□ 0.8
SGCE-208ENST00000450385 CIAO1O76071 339 aa20.03■□□□□ 0.8
SGCE-208ENST00000450385 MIER1Q8N108 512 aa20.03■□□□□ 0.8
SGCE-208ENST00000450385 MRIQ9BWK5 157 aa20.03■□□□□ 0.8
SGCE-208ENST00000450385 ASTN2O75129 1339 aaPredicted RBP20.02■□□□□ 0.8
SGCE-208ENST00000450385 UNCXA6NJT0 531 aa20.02■□□□□ 0.8
SGCE-208ENST00000450385 EYA2O00167 538 aa20.02■□□□□ 0.8
SGCE-208ENST00000450385 ZBTB22O15209 634 aa20.02■□□□□ 0.8
SGCE-208ENST00000450385 IFIT1P09914 478 aaKnown RBP20.02■□□□□ 0.8
SGCE-208ENST00000450385 ZNF157P51786 506 aaPredicted RBP20.02■□□□□ 0.8
SGCE-208ENST00000450385 PTPN12Q05209 780 aaKnown RBP20.02■□□□□ 0.8
SGCE-208ENST00000450385 PUM3Q15397 648 aaKnown RBP20.02■□□□□ 0.8
SGCE-208ENST00000450385 LRRC24Q50LG9 513 aa20.02■□□□□ 0.8
SGCE-208ENST00000450385 CERS5Q8N5B7 392 aa20.02■□□□□ 0.8
SGCE-208ENST00000450385 SERPINA10Q9UK55 444 aa20.02■□□□□ 0.8
SGCE-208ENST00000450385 SUGT1Q9Y2Z0 365 aa20.02■□□□□ 0.8
SGCE-208ENST00000450385 RFX5P48382 616 aaPredicted RBP20.01■□□□□ 0.79
SGCE-208ENST00000450385 HDLBPQ00341 1268 aaKnown RBP20.01■□□□□ 0.79
SGCE-208ENST00000450385 GRM1Q13255 1194 aa20.01■□□□□ 0.79
SGCE-208ENST00000450385 FAM155AB1AL88 458 aaPredicted RBP20■□□□□ 0.79
SGCE-208ENST00000450385 AOC2O75106 756 aa20■□□□□ 0.79
SGCE-208ENST00000450385 HSPA8P11142 646 aaKnown RBP20■□□□□ 0.79
SGCE-208ENST00000450385 FGFR2P21802 821 aa20■□□□□ 0.79
SGCE-208ENST00000450385 GYG1P46976 350 aa20■□□□□ 0.79
SGCE-208ENST00000450385 MFSD14BQ5SR56 506 aa20■□□□□ 0.79
SGCE-208ENST00000450385 LPIN2Q92539 896 aa20■□□□□ 0.79
SGCE-208ENST00000450385 AKAP11Q9UKA4 1901 aa20■□□□□ 0.79
SGCE-208ENST00000450385 SPDYE2BA6NHP3 402 aa19.99■□□□□ 0.79
SGCE-208ENST00000450385 SLC10A3P09131 477 aa19.99■□□□□ 0.79
SGCE-208ENST00000450385 SPDYE6P0CI01 402 aa19.99■□□□□ 0.79
SGCE-208ENST00000450385 LBX1P52954 281 aa19.99■□□□□ 0.79
SGCE-208ENST00000450385 CFAP100Q494V2 611 aa19.99■□□□□ 0.79
SGCE-208ENST00000450385 DLK2Q6UY11 383 aa19.99■□□□□ 0.79
SGCE-208ENST00000450385 ATF7IPQ6VMQ6 1270 aa19.99■□□□□ 0.79
SGCE-208ENST00000450385 SAGE1Q9NXZ1 904 aa19.99■□□□□ 0.79
SGCE-208ENST00000450385 FRAT2O75474 233 aaPredicted RBP19.98■□□□□ 0.79
SGCE-208ENST00000450385 SLC5A1P13866 664 aa19.98■□□□□ 0.79
SGCE-208ENST00000450385 IL15P40933 162 aaPredicted RBP19.98■□□□□ 0.79
SGCE-208ENST00000450385 HNRNPUQ00839 825 aaKnown RBP eCLIP19.98■□□□□ 0.79
SGCE-208ENST00000450385 TNFAIP1Q13829 316 aa19.98■□□□□ 0.79
SGCE-208ENST00000450385 SUPT20HL1Q3ZLR7 823 aa19.98■□□□□ 0.79
SGCE-208ENST00000450385 ARMC9Q7Z3E5 817 aa19.98■□□□□ 0.79
SGCE-208ENST00000450385 DEFB129Q9H1M3 183 aa19.98■□□□□ 0.79
SGCE-208ENST00000450385 COPRSQ9NQ92 184 aa19.98■□□□□ 0.79
SGCE-208ENST00000450385 CEP126Q9P2H0 1117 aa19.98■□□□□ 0.79
SGCE-208ENST00000450385 ARAP2Q8WZ64 1704 aa19.97■□□□□ 0.79
SGCE-208ENST00000450385 MTX1Q13505 466 aa19.97■□□□□ 0.79
SGCE-208ENST00000450385 ATG9AQ7Z3C6 839 aa19.96■□□□□ 0.79
SGCE-208ENST00000450385 KLHDC4Q8TBB5 520 aa19.96■□□□□ 0.79
SGCE-208ENST00000450385 PRMT6Q96LA8 375 aaPredicted RBP19.96■□□□□ 0.79
SGCE-208ENST00000450385 TTF2Q9UNY4 1162 aaKnown RBP19.96■□□□□ 0.79
SGCE-208ENST00000450385 LRRFIP2Q9Y608 721 aaKnown RBP19.96■□□□□ 0.79
SGCE-208ENST00000450385 MAST3O60307 1309 aa19.96■□□□□ 0.79
SGCE-208ENST00000450385 PPP1R12BO60237 982 aaPredicted RBP19.95■□□□□ 0.78
SGCE-208ENST00000450385 MAP3K11Q16584 847 aa19.95■□□□□ 0.78
SGCE-208ENST00000450385 WDR66Q8TBY9 1149 aa19.95■□□□□ 0.78
SGCE-208ENST00000450385 GNL3LQ9NVN8 582 aaKnown RBP19.95■□□□□ 0.78
SGCE-208ENST00000450385 F8W031 263 aaPredicted RBP19.94■□□□□ 0.78
SGCE-208ENST00000450385 TRIM27P14373 513 aa19.94■□□□□ 0.78
SGCE-208ENST00000450385 RBM5P52756 815 aaKnown RBP eCLIP19.94■□□□□ 0.78
SGCE-208ENST00000450385 MEIS3Q99687 375 aa19.94■□□□□ 0.78
SGCE-208ENST00000450385 ZBED9Q6R2W3 1325 aa19.94■□□□□ 0.78
SGCE-208ENST00000450385 MYH13Q9UKX3 1938 aa19.94■□□□□ 0.78
SGCE-208ENST00000450385 SEMA3EO15041 775 aa19.93■□□□□ 0.78
SGCE-208ENST00000450385 BCAMP50895 628 aa19.93■□□□□ 0.78
SGCE-208ENST00000450385 KIF23Q02241 960 aaPredicted RBP19.93■□□□□ 0.78
SGCE-208ENST00000450385 TTLL12Q14166 644 aaPredicted RBP19.93■□□□□ 0.78
SGCE-208ENST00000450385 ZKSCAN2Q63HK3 967 aa19.93■□□□□ 0.78
SGCE-208ENST00000450385 RASAL3Q86YV0 1011 aa19.93■□□□□ 0.78
SGCE-208ENST00000450385 BCAR3O75815 825 aa19.92■□□□□ 0.78
SGCE-208ENST00000450385 GNAI2P04899 355 aa19.92■□□□□ 0.78
SGCE-208ENST00000450385 SPDYE2Q495Y8 402 aa19.92■□□□□ 0.78
SGCE-208ENST00000450385 LDLRAD1Q5T700 205 aa19.92■□□□□ 0.78
SGCE-208ENST00000450385 DZIP1LQ8IYY4 767 aaKnown RBP19.92■□□□□ 0.78
SGCE-208ENST00000450385 TEKT1Q969V4 418 aa19.92■□□□□ 0.78
SGCE-208ENST00000450385 CSRNP1Q96S65 589 aa19.92■□□□□ 0.78
SGCE-208ENST00000450385 AKAP2Q9Y2D5 859 aa19.92■□□□□ 0.78
SGCE-208ENST00000450385 UBE2Q2LH0YL09 131 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms