RNA–Protein interactions for RNA: ENST00000449415.5

RFTN1-205, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 3

Gene RFTN1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-205ENST00000449415 BCAMP50895 628 aa22.35■■□□□ 1.17
RFTN1-205ENST00000449415 MTX1Q13505 466 aa22.35■■□□□ 1.17
RFTN1-205ENST00000449415 CAVIN4Q5BKX8 364 aa22.35■■□□□ 1.17
RFTN1-205ENST00000449415 ANGEL2Q5VTE6 544 aaKnown RBP22.35■■□□□ 1.17
RFTN1-205ENST00000449415 KRT26Q7Z3Y9 468 aa22.35■■□□□ 1.17
RFTN1-205ENST00000449415 FBXO33Q7Z6M2 555 aa22.35■■□□□ 1.17
RFTN1-205ENST00000449415 YTHDC1Q96MU7 727 aaKnown RBP22.35■■□□□ 1.17
RFTN1-205ENST00000449415 CEP126Q9P2H0 1117 aa22.35■■□□□ 1.17
RFTN1-205ENST00000449415 FBXO3Q9UK99 471 aa22.35■■□□□ 1.17
RFTN1-205ENST00000449415 ABT1Q9ULW3 272 aaKnown RBP22.35■■□□□ 1.17
RFTN1-205ENST00000449415 MYH13Q9UKX3 1938 aa22.35■■□□□ 1.17
RFTN1-205ENST00000449415 PNMA6EA0A0J9YXQ4 647 aa22.34■■□□□ 1.17
RFTN1-205ENST00000449415 FRAT2O75474 233 aaPredicted RBP22.34■■□□□ 1.17
RFTN1-205ENST00000449415 CELF2O95319 508 aaKnown RBP22.34■■□□□ 1.17
RFTN1-205ENST00000449415 SLC5A1P13866 664 aa22.34■■□□□ 1.17
RFTN1-205ENST00000449415 IL15P40933 162 aaPredicted RBP22.34■■□□□ 1.17
RFTN1-205ENST00000449415 CST9Q5W186 159 aa22.34■■□□□ 1.17
RFTN1-205ENST00000449415 HDAC9Q9UKV0 1011 aa22.34■■□□□ 1.17
RFTN1-205ENST00000449415 SCAF8Q9UPN6 1271 aaKnown RBP22.34■■□□□ 1.17
RFTN1-205ENST00000449415 CHAF1AQ13111 956 aaPredicted RBP22.33■■□□□ 1.17
RFTN1-205ENST00000449415 NBPF9Q3BBW0 867 aa22.33■■□□□ 1.17
RFTN1-205ENST00000449415 LPIN2Q92539 896 aa22.33■■□□□ 1.17
RFTN1-205ENST00000449415 FAM205AQ6ZU69 1335 aa22.32■■□□□ 1.16
RFTN1-205ENST00000449415 ZBTB7BO15156 539 aaPredicted RBP22.32■■□□□ 1.16
RFTN1-205ENST00000449415 ATP2B3Q16720 1220 aa22.32■■□□□ 1.16
RFTN1-205ENST00000449415 SULF1Q8IWU6 871 aa22.32■■□□□ 1.16
RFTN1-205ENST00000449415 CNTNAP1P78357 1384 aa22.31■■□□□ 1.16
RFTN1-205ENST00000449415 MFSD14BQ5SR56 506 aa22.31■■□□□ 1.16
RFTN1-205ENST00000449415 ARAP2Q8WZ64 1704 aa22.31■■□□□ 1.16
RFTN1-205ENST00000449415 WNT10BO00744 389 aa22.3■■□□□ 1.16
RFTN1-205ENST00000449415 FKBP1AP62942 108 aaKnown RBP22.3■■□□□ 1.16
RFTN1-205ENST00000449415 PCDHAC2Q9Y5I4 1007 aa22.3■■□□□ 1.16
RFTN1-205ENST00000449415 MS4A1P11836 297 aa22.29■■□□□ 1.16
RFTN1-205ENST00000449415 TFCP2Q12800 502 aa22.29■■□□□ 1.16
RFTN1-205ENST00000449415 DEFB115Q30KQ5 88 aa22.29■■□□□ 1.16
RFTN1-205ENST00000449415 PAXIP1Q6ZW49 1069 aaPredicted RBP22.29■■□□□ 1.16
RFTN1-205ENST00000449415 ATP8B2P98198 1209 aa22.28■■□□□ 1.16
RFTN1-205ENST00000449415 DLGAP5Q15398 846 aa22.28■■□□□ 1.16
RFTN1-205ENST00000449415 JMYQ8N9B5 988 aa22.28■■□□□ 1.16
RFTN1-205ENST00000449415 COG6Q9Y2V7 657 aa22.28■■□□□ 1.16
RFTN1-205ENST00000449415 ECM29Q5VYK3 1845 aa22.27■■□□□ 1.16
RFTN1-205ENST00000449415 ADORA1P30542 326 aa22.27■■□□□ 1.16
RFTN1-205ENST00000449415 VEGFBP49765 207 aa22.27■■□□□ 1.16
RFTN1-205ENST00000449415 MMP14P50281 582 aa22.27■■□□□ 1.16
RFTN1-205ENST00000449415 RBM5P52756 815 aaKnown RBP eCLIP22.27■■□□□ 1.16
RFTN1-205ENST00000449415 GRM1Q13255 1194 aa22.27■■□□□ 1.16
RFTN1-205ENST00000449415 G3BP1Q13283 466 aaKnown RBP eCLIP22.27■■□□□ 1.16
RFTN1-205ENST00000449415 CFAP100Q494V2 611 aa22.27■■□□□ 1.16
RFTN1-205ENST00000449415 CDCA5Q96FF9 252 aa22.27■■□□□ 1.16
RFTN1-205ENST00000449415 TTF2Q9UNY4 1162 aaKnown RBP22.27■■□□□ 1.16
RFTN1-205ENST00000449415 RASSF10A6NK89 507 aa22.26■■□□□ 1.15
RFTN1-205ENST00000449415 TIMM10P62072 90 aa22.26■■□□□ 1.15
RFTN1-205ENST00000449415 GRIK5Q16478 980 aa22.26■■□□□ 1.15
RFTN1-205ENST00000449415 TLL2Q9Y6L7 1015 aa22.26■■□□□ 1.15
RFTN1-205ENST00000449415 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.26■■□□□ 1.15
RFTN1-205ENST00000449415 PITPNM2Q9BZ72 1349 aa22.26■■□□□ 1.15
RFTN1-205ENST00000449415 POLA2Q14181 598 aa22.25■■□□□ 1.15
RFTN1-205ENST00000449415 MVPQ14764 893 aaKnown RBP22.25■■□□□ 1.15
RFTN1-205ENST00000449415 PRAMEF18Q5VWM3 479 aa22.25■■□□□ 1.15
RFTN1-205ENST00000449415 ZBED3Q96IU2 234 aaPredicted RBP22.25■■□□□ 1.15
RFTN1-205ENST00000449415 PHKA1P46020 1223 aa22.24■■□□□ 1.15
RFTN1-205ENST00000449415 SSH3Q8TE77 659 aa22.24■■□□□ 1.15
RFTN1-205ENST00000449415 TBC1D22AQ8WUA7 517 aa22.24■■□□□ 1.15
RFTN1-205ENST00000449415 COL1A1P02452 1464 aaPredicted RBP22.23■■□□□ 1.15
RFTN1-205ENST00000449415 A0A1B0GUL7 405 aa22.23■■□□□ 1.15
RFTN1-205ENST00000449415 OS9Q13438 667 aaPredicted RBP22.23■■□□□ 1.15
RFTN1-205ENST00000449415 CYP4F22Q6NT55 531 aa22.23■■□□□ 1.15
RFTN1-205ENST00000449415 SAPCD2Q86UD0 394 aa22.23■■□□□ 1.15
RFTN1-205ENST00000449415 PRMT6Q96LA8 375 aaPredicted RBP22.23■■□□□ 1.15
RFTN1-205ENST00000449415 NEUROD6Q96NK8 337 aa22.23■■□□□ 1.15
RFTN1-205ENST00000449415 GBA2Q9HCG7 927 aaPredicted RBP22.23■■□□□ 1.15
RFTN1-205ENST00000449415 GNL3LQ9NVN8 582 aaKnown RBP22.23■■□□□ 1.15
RFTN1-205ENST00000449415 AKAP2Q9Y2D5 859 aa22.23■■□□□ 1.15
RFTN1-205ENST00000449415 AOX1Q06278 1338 aa22.23■■□□□ 1.15
RFTN1-205ENST00000449415 CLRN2A0PK11 232 aa22.22■■□□□ 1.15
RFTN1-205ENST00000449415 SPDYE2BA6NHP3 402 aa22.22■■□□□ 1.15
RFTN1-205ENST00000449415 SURF6O75683 361 aaKnown RBP22.22■■□□□ 1.15
RFTN1-205ENST00000449415 SPDYE6P0CI01 402 aa22.22■■□□□ 1.15
RFTN1-205ENST00000449415 C20orf194Q5TEA3 1177 aa22.22■■□□□ 1.15
RFTN1-205ENST00000449415 CEP85Q6P2H3 762 aa22.22■■□□□ 1.15
RFTN1-205ENST00000449415 MTMR14Q8NCE2 650 aa22.22■■□□□ 1.15
RFTN1-205ENST00000449415 XAGE2Q96GT9 111 aa22.22■■□□□ 1.15
RFTN1-205ENST00000449415 WDR33Q9C0J8 1336 aaKnown RBP22.22■■□□□ 1.15
RFTN1-205ENST00000449415 CCDC102BQ68D86 513 aa22.21■■□□□ 1.15
RFTN1-205ENST00000449415 APOBEC3FQ8IUX4 373 aaKnown RBP22.21■■□□□ 1.15
RFTN1-205ENST00000449415 C2orf69Q8N8R5 385 aa22.21■■□□□ 1.15
RFTN1-205ENST00000449415 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.21■■□□□ 1.15
RFTN1-205ENST00000449415 CAPNS2Q96L46 248 aa22.21■■□□□ 1.15
RFTN1-205ENST00000449415 DDX19BQ9UMR2 479 aa22.21■■□□□ 1.15
RFTN1-205ENST00000449415 MYO1BO43795 1136 aa22.2■■□□□ 1.14
RFTN1-205ENST00000449415 CRKP46108 304 aa22.2■■□□□ 1.14
RFTN1-205ENST00000449415 HUNKP57058 714 aa22.2■■□□□ 1.14
RFTN1-205ENST00000449415 VEZTQ9HBM0 779 aa22.2■■□□□ 1.14
RFTN1-205ENST00000449415 WDR66Q8TBY9 1149 aa22.19■■□□□ 1.14
RFTN1-205ENST00000449415 SERPINA10Q9UK55 444 aa22.19■■□□□ 1.14
RFTN1-205ENST00000449415 HSPA1AP0DMV8 641 aaKnown RBP22.18■■□□□ 1.14
RFTN1-205ENST00000449415 HSPA1BP0DMV9 641 aaKnown RBP22.18■■□□□ 1.14
RFTN1-205ENST00000449415 ECE1P42892 770 aa22.18■■□□□ 1.14
RFTN1-205ENST00000449415 GORABQ5T7V8 394 aa22.18■■□□□ 1.14
RFTN1-205ENST00000449415 TDRD3Q9H7E2 651 aaKnown RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms