RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 ZNF609O15014 1411 aa17.54■□□□□ 0.4
SREBF1-207ENST00000447641 G3V3G9 751 aa17.53■□□□□ 0.4
SREBF1-207ENST00000447641 ECE1P42892 770 aa17.53■□□□□ 0.4
SREBF1-207ENST00000447641 PUM3Q15397 648 aaKnown RBP17.53■□□□□ 0.4
SREBF1-207ENST00000447641 DCAF8Q5TAQ9 597 aa17.53■□□□□ 0.4
SREBF1-207ENST00000447641 FBXO33Q7Z6M2 555 aa17.53■□□□□ 0.4
SREBF1-207ENST00000447641 SAPCD2Q86UD0 394 aa17.53■□□□□ 0.4
SREBF1-207ENST00000447641 SIRT2Q8IXJ6 389 aa17.53■□□□□ 0.4
SREBF1-207ENST00000447641 USP17L3A6NCW0 530 aa17.52■□□□□ 0.4
SREBF1-207ENST00000447641 USP17L4A6NCW7 530 aa17.52■□□□□ 0.4
SREBF1-207ENST00000447641 USP17L1Q7RTZ2 530 aa17.52■□□□□ 0.4
SREBF1-207ENST00000447641 DPF2Q92785 391 aa17.52■□□□□ 0.4
SREBF1-207ENST00000447641 GMLQ99445 158 aa17.52■□□□□ 0.4
SREBF1-207ENST00000447641 GLIS2Q9BZE0 524 aaPredicted RBP17.52■□□□□ 0.4
SREBF1-207ENST00000447641 ADARB2Q9NS39 739 aaKnown RBP17.52■□□□□ 0.4
SREBF1-207ENST00000447641 SHTN1A0MZ66 631 aa17.51■□□□□ 0.39
SREBF1-207ENST00000447641 CCDC85CA6NKD9 419 aa17.51■□□□□ 0.39
SREBF1-207ENST00000447641 SASH1O94885 1247 aa17.51■□□□□ 0.39
SREBF1-207ENST00000447641 RPS12P25398 132 aaKnown RBP17.51■□□□□ 0.39
SREBF1-207ENST00000447641 GMPSP49915 693 aaPredicted RBP17.51■□□□□ 0.39
SREBF1-207ENST00000447641 HIRAP54198 1017 aaPredicted RBP17.51■□□□□ 0.39
SREBF1-207ENST00000447641 STRIP1Q5VSL9 837 aa17.51■□□□□ 0.39
SREBF1-207ENST00000447641 ERICH6BQ5W0A0 696 aa17.51■□□□□ 0.39
SREBF1-207ENST00000447641 ZNF804AQ7Z570 1209 aa17.51■□□□□ 0.39
SREBF1-207ENST00000447641 TDRD7Q8NHU6 1098 aaKnown RBP17.51■□□□□ 0.39
SREBF1-207ENST00000447641 TRPM4Q8TD43 1214 aa17.51■□□□□ 0.39
SREBF1-207ENST00000447641 LPIN2Q92539 896 aa17.51■□□□□ 0.39
SREBF1-207ENST00000447641 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.51■□□□□ 0.39
SREBF1-207ENST00000447641 CELF2O95319 508 aaKnown RBP17.5■□□□□ 0.39
SREBF1-207ENST00000447641 HIBADHP31937 336 aaKnown RBP17.5■□□□□ 0.39
SREBF1-207ENST00000447641 GYG1P46976 350 aa17.5■□□□□ 0.39
SREBF1-207ENST00000447641 TFCP2Q12800 502 aa17.5■□□□□ 0.39
SREBF1-207ENST00000447641 G3BP1Q13283 466 aaKnown RBP eCLIP17.5■□□□□ 0.39
SREBF1-207ENST00000447641 DACT2Q5SW24 774 aa17.5■□□□□ 0.39
SREBF1-207ENST00000447641 ZIC5Q96T25 663 aa17.5■□□□□ 0.39
SREBF1-207ENST00000447641 MCOLN1Q9GZU1 580 aa17.5■□□□□ 0.39
SREBF1-207ENST00000447641 PGAP2Q9UHJ9 254 aa17.5■□□□□ 0.39
SREBF1-207ENST00000447641 ZBTB12Q9Y330 459 aaPredicted RBP17.5■□□□□ 0.39
SREBF1-207ENST00000447641 ZBTB22O15209 634 aa17.49■□□□□ 0.39
SREBF1-207ENST00000447641 IFIT1P09914 478 aaKnown RBP17.49■□□□□ 0.39
SREBF1-207ENST00000447641 MAP2K2P36507 400 aa17.49■□□□□ 0.39
SREBF1-207ENST00000447641 MLLT1Q03111 559 aaPredicted RBP17.49■□□□□ 0.39
SREBF1-207ENST00000447641 ATP2B3Q16720 1220 aa17.49■□□□□ 0.39
SREBF1-207ENST00000447641 RSBN1LQ6PCB5 846 aaPredicted RBP17.49■□□□□ 0.39
SREBF1-207ENST00000447641 AGBL3Q8NEM8 1001 aa17.49■□□□□ 0.39
SREBF1-207ENST00000447641 ARAP2Q8WZ64 1704 aa17.48■□□□□ 0.39
SREBF1-207ENST00000447641 SURF6O75683 361 aaKnown RBP17.48■□□□□ 0.39
SREBF1-207ENST00000447641 SLC5A1P13866 664 aa17.48■□□□□ 0.39
SREBF1-207ENST00000447641 TTLL5Q6EMB2 1281 aa17.48■□□□□ 0.39
SREBF1-207ENST00000447641 AKAP2Q9Y2D5 859 aa17.48■□□□□ 0.39
SREBF1-207ENST00000447641 SUPT16HQ9Y5B9 1047 aaKnown RBP17.48■□□□□ 0.39
SREBF1-207ENST00000447641 GTF3C3Q9Y5Q9 886 aa17.48■□□□□ 0.39
SREBF1-207ENST00000447641 FAM205AQ6ZU69 1335 aa17.47■□□□□ 0.39
SREBF1-207ENST00000447641 BCAMP50895 628 aa17.47■□□□□ 0.39
SREBF1-207ENST00000447641 FKBP1AP62942 108 aaKnown RBP17.47■□□□□ 0.39
SREBF1-207ENST00000447641 GTF2IP78347 998 aa17.47■□□□□ 0.39
SREBF1-207ENST00000447641 CAVIN4Q5BKX8 364 aa17.47■□□□□ 0.39
SREBF1-207ENST00000447641 DLK2Q6UY11 383 aa17.47■□□□□ 0.39
SREBF1-207ENST00000447641 HHIPL1Q96JK4 782 aa17.47■□□□□ 0.39
SREBF1-207ENST00000447641 CRBNQ96SW2 442 aa17.47■□□□□ 0.39
SREBF1-207ENST00000447641 BEGAINQ9BUH8 593 aa17.47■□□□□ 0.39
SREBF1-207ENST00000447641 GPR108Q9NPR9 543 aa17.47■□□□□ 0.39
SREBF1-207ENST00000447641 CNOT7Q9UIV1 285 aaKnown RBP17.47■□□□□ 0.39
SREBF1-207ENST00000447641 ZNF280AP59817 542 aaPredicted RBP17.46■□□□□ 0.39
SREBF1-207ENST00000447641 TIMM10P62072 90 aa17.46■□□□□ 0.39
SREBF1-207ENST00000447641 AKAP11Q9UKA4 1901 aa17.45■□□□□ 0.38
SREBF1-207ENST00000447641 A0A1B0GUL7 405 aa17.45■□□□□ 0.38
SREBF1-207ENST00000447641 HMMRO75330 724 aa17.45■□□□□ 0.38
SREBF1-207ENST00000447641 MICALL2Q8IY33 904 aa17.45■□□□□ 0.38
SREBF1-207ENST00000447641 CERS5Q8N5B7 392 aa17.45■□□□□ 0.38
SREBF1-207ENST00000447641 MXD3Q9BW11 206 aa17.45■□□□□ 0.38
SREBF1-207ENST00000447641 MYO3BQ8WXR4 1341 aa17.45■□□□□ 0.38
SREBF1-207ENST00000447641 ADORA1P30542 326 aa17.44■□□□□ 0.38
SREBF1-207ENST00000447641 MMP14P50281 582 aa17.44■□□□□ 0.38
SREBF1-207ENST00000447641 AAMPQ13685 434 aa17.44■□□□□ 0.38
SREBF1-207ENST00000447641 VPS37DQ86XT2 251 aa17.44■□□□□ 0.38
SREBF1-207ENST00000447641 ZNF408Q9H9D4 720 aa17.44■□□□□ 0.38
SREBF1-207ENST00000447641 PCDHB15Q9Y5E8 787 aa17.44■□□□□ 0.38
SREBF1-207ENST00000447641 PDE4DIPQ5VU43 2346 aa17.43■□□□□ 0.38
SREBF1-207ENST00000447641 H7C1D1 291 aa17.43■□□□□ 0.38
SREBF1-207ENST00000447641 EGFRP00533 1210 aa17.43■□□□□ 0.38
SREBF1-207ENST00000447641 USP17L8P0C7I0 530 aa17.43■□□□□ 0.38
SREBF1-207ENST00000447641 HSP90AB4PQ58FF6 505 aa17.43■□□□□ 0.38
SREBF1-207ENST00000447641 XAGE2Q96GT9 111 aa17.43■□□□□ 0.38
SREBF1-207ENST00000447641 EXOC6BQ9Y2D4 811 aa17.43■□□□□ 0.38
SREBF1-207ENST00000447641 FAM155AB1AL88 458 aaPredicted RBP17.42■□□□□ 0.38
SREBF1-207ENST00000447641 CA12O43570 354 aa17.42■□□□□ 0.38
SREBF1-207ENST00000447641 PHKA1P46020 1223 aa17.42■□□□□ 0.38
SREBF1-207ENST00000447641 OS9Q13438 667 aaPredicted RBP17.42■□□□□ 0.38
SREBF1-207ENST00000447641 TNNI3KQ59H18 835 aa17.42■□□□□ 0.38
SREBF1-207ENST00000447641 CCDC102BQ68D86 513 aa17.42■□□□□ 0.38
SREBF1-207ENST00000447641 ERC1Q8IUD2 1116 aa17.42■□□□□ 0.38
SREBF1-207ENST00000447641 ZC3H15Q8WU90 426 aaKnown RBP17.42■□□□□ 0.38
SREBF1-207ENST00000447641 FPGT-TNNI3KV9GXZ4 949 aa17.42■□□□□ 0.38
SREBF1-207ENST00000447641 HTTP42858 3142 aa17.41■□□□□ 0.38
SREBF1-207ENST00000447641 SEMA3EO15041 775 aa17.41■□□□□ 0.38
SREBF1-207ENST00000447641 RAB11FIP3O75154 756 aa17.41■□□□□ 0.38
SREBF1-207ENST00000447641 DGKZQ13574 1117 aa17.41■□□□□ 0.38
SREBF1-207ENST00000447641 SAMD7Q7Z3H4 446 aa17.41■□□□□ 0.38
SREBF1-207ENST00000447641 IQSEC3Q9UPP2 1182 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms