RNA–Protein interactions for RNA: ENST00000444997.1

PDCD4-203, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-203ENST00000444997 RGMBQ6NW40 437 aa21.77■■□□□ 1.08
PDCD4-203ENST00000444997 PRDM10Q9NQV6 1147 aa21.77■■□□□ 1.08
PDCD4-203ENST00000444997 PDE8BO95263 885 aa21.76■■□□□ 1.07
PDCD4-203ENST00000444997 FKBP1BP68106 108 aa21.76■■□□□ 1.07
PDCD4-203ENST00000444997 NOGQ13253 232 aa21.76■■□□□ 1.07
PDCD4-203ENST00000444997 CERS5Q8N5B7 392 aa21.76■■□□□ 1.07
PDCD4-203ENST00000444997 TDRD7Q8NHU6 1098 aaKnown RBP21.76■■□□□ 1.07
PDCD4-203ENST00000444997 CCDC102AQ96A19 550 aa21.76■■□□□ 1.07
PDCD4-203ENST00000444997 FAM84BQ96KN1 310 aaPredicted RBP21.76■■□□□ 1.07
PDCD4-203ENST00000444997 F8W031 263 aaPredicted RBP21.75■■□□□ 1.07
PDCD4-203ENST00000444997 NF2P35240 595 aa21.75■■□□□ 1.07
PDCD4-203ENST00000444997 APOBEC3FQ8IUX4 373 aaKnown RBP21.75■■□□□ 1.07
PDCD4-203ENST00000444997 KLHDC4Q8TBB5 520 aa21.75■■□□□ 1.07
PDCD4-203ENST00000444997 JAG2Q9Y219 1238 aa21.75■■□□□ 1.07
PDCD4-203ENST00000444997 MYO1BO43795 1136 aa21.74■■□□□ 1.07
PDCD4-203ENST00000444997 FRAT2O75474 233 aaPredicted RBP21.74■■□□□ 1.07
PDCD4-203ENST00000444997 ZNF157P51786 506 aaPredicted RBP21.74■■□□□ 1.07
PDCD4-203ENST00000444997 LBX1P52954 281 aa21.74■■□□□ 1.07
PDCD4-203ENST00000444997 SCAF8Q9UPN6 1271 aaKnown RBP21.74■■□□□ 1.07
PDCD4-203ENST00000444997 FAM205AQ6ZU69 1335 aa21.74■■□□□ 1.07
PDCD4-203ENST00000444997 PCNTO95613 3336 aa21.73■■□□□ 1.07
PDCD4-203ENST00000444997 EYA2O00167 538 aa21.73■■□□□ 1.07
PDCD4-203ENST00000444997 IFIT1P09914 478 aaKnown RBP21.73■■□□□ 1.07
PDCD4-203ENST00000444997 MTMR14Q8NCE2 650 aa21.73■■□□□ 1.07
PDCD4-203ENST00000444997 A0A1B0GUL6 1792 aa21.72■■□□□ 1.07
PDCD4-203ENST00000444997 CA12O43570 354 aa21.72■■□□□ 1.07
PDCD4-203ENST00000444997 GNAI3P08754 354 aa21.72■■□□□ 1.07
PDCD4-203ENST00000444997 HSPA8P11142 646 aaKnown RBP21.72■■□□□ 1.07
PDCD4-203ENST00000444997 RBM5P52756 815 aaKnown RBP eCLIP21.72■■□□□ 1.07
PDCD4-203ENST00000444997 PUM3Q15397 648 aaKnown RBP21.72■■□□□ 1.07
PDCD4-203ENST00000444997 MFSD14BQ5SR56 506 aa21.72■■□□□ 1.07
PDCD4-203ENST00000444997 INTS3Q68E01 1043 aaKnown RBP21.72■■□□□ 1.07
PDCD4-203ENST00000444997 VGLL2Q8N8G2 317 aa21.72■■□□□ 1.07
PDCD4-203ENST00000444997 FRAT1Q92837 279 aaPredicted RBP21.72■■□□□ 1.07
PDCD4-203ENST00000444997 ZBED3Q96IU2 234 aaPredicted RBP21.72■■□□□ 1.07
PDCD4-203ENST00000444997 POLR2AP24928 1970 aaKnown RBP21.72■■□□□ 1.07
PDCD4-203ENST00000444997 THSD7BQ9C0I4 1608 aa21.71■■□□□ 1.07
PDCD4-203ENST00000444997 RFX5P48382 616 aaPredicted RBP21.71■■□□□ 1.07
PDCD4-203ENST00000444997 PTPN12Q05209 780 aaKnown RBP21.71■■□□□ 1.07
PDCD4-203ENST00000444997 TTLL12Q14166 644 aaPredicted RBP21.71■■□□□ 1.07
PDCD4-203ENST00000444997 CFAP100Q494V2 611 aa21.71■■□□□ 1.07
PDCD4-203ENST00000444997 PRAMEF18Q5VWM3 479 aa21.71■■□□□ 1.07
PDCD4-203ENST00000444997 FBXO33Q7Z6M2 555 aa21.71■■□□□ 1.07
PDCD4-203ENST00000444997 FBXO3Q9UK99 471 aa21.71■■□□□ 1.07
PDCD4-203ENST00000444997 LRRFIP2Q9Y608 721 aaKnown RBP21.71■■□□□ 1.07
PDCD4-203ENST00000444997 ZNF646O15015 1829 aaPredicted RBP21.7■■□□□ 1.06
PDCD4-203ENST00000444997 BCAR3O75815 825 aa21.69■■□□□ 1.06
PDCD4-203ENST00000444997 SLC5A1P13866 664 aa21.69■■□□□ 1.06
PDCD4-203ENST00000444997 CHAF1AQ13111 956 aaPredicted RBP21.69■■□□□ 1.06
PDCD4-203ENST00000444997 ATF7IPQ6VMQ6 1270 aa21.69■■□□□ 1.06
PDCD4-203ENST00000444997 TBC1D22AQ8WUA7 517 aa21.69■■□□□ 1.06
PDCD4-203ENST00000444997 MEIS3Q99687 375 aa21.69■■□□□ 1.06
PDCD4-203ENST00000444997 SIL1Q9H173 461 aa21.69■■□□□ 1.06
PDCD4-203ENST00000444997 TTF2Q9UNY4 1162 aaKnown RBP21.69■■□□□ 1.06
PDCD4-203ENST00000444997 SPDYE2BA6NHP3 402 aa21.68■■□□□ 1.06
PDCD4-203ENST00000444997 FAM155AB1AL88 458 aaPredicted RBP21.68■■□□□ 1.06
PDCD4-203ENST00000444997 CIAO1O76071 339 aa21.68■■□□□ 1.06
PDCD4-203ENST00000444997 SPDYE6P0CI01 402 aa21.68■■□□□ 1.06
PDCD4-203ENST00000444997 LPIN2Q92539 896 aa21.68■■□□□ 1.06
PDCD4-203ENST00000444997 CEP126Q9P2H0 1117 aa21.68■■□□□ 1.06
PDCD4-203ENST00000444997 SERPINA10Q9UK55 444 aa21.68■■□□□ 1.06
PDCD4-203ENST00000444997 IQSEC3Q9UPP2 1182 aaPredicted RBP21.68■■□□□ 1.06
PDCD4-203ENST00000444997 SLC10A3P09131 477 aa21.67■■□□□ 1.06
PDCD4-203ENST00000444997 TRIM27P14373 513 aa21.67■■□□□ 1.06
PDCD4-203ENST00000444997 BCAMP50895 628 aa21.67■■□□□ 1.06
PDCD4-203ENST00000444997 ARMC9Q7Z3E5 817 aa21.67■■□□□ 1.06
PDCD4-203ENST00000444997 PRMT6Q96LA8 375 aaPredicted RBP21.67■■□□□ 1.06
PDCD4-203ENST00000444997 DEFB129Q9H1M3 183 aa21.67■■□□□ 1.06
PDCD4-203ENST00000444997 PPP2R3BQ9Y5P8 575 aa21.67■■□□□ 1.06
PDCD4-203ENST00000444997 CLRN2A0PK11 232 aa21.66■■□□□ 1.06
PDCD4-203ENST00000444997 UBE2Q2LH0YL09 131 aa21.66■■□□□ 1.06
PDCD4-203ENST00000444997 FGFR2P21802 821 aa21.66■■□□□ 1.06
PDCD4-203ENST00000444997 IL15P40933 162 aaPredicted RBP21.66■■□□□ 1.06
PDCD4-203ENST00000444997 KIF23Q02241 960 aaPredicted RBP21.66■■□□□ 1.06
PDCD4-203ENST00000444997 ATG9AQ7Z3C6 839 aa21.66■■□□□ 1.06
PDCD4-203ENST00000444997 VEZTQ9HBM0 779 aa21.66■■□□□ 1.06
PDCD4-203ENST00000444997 COL1A1P02452 1464 aaPredicted RBP21.65■■□□□ 1.06
PDCD4-203ENST00000444997 ZKSCAN2Q63HK3 967 aa21.65■■□□□ 1.06
PDCD4-203ENST00000444997 MOB2Q70IA6 237 aa21.65■■□□□ 1.06
PDCD4-203ENST00000444997 REM2Q8IYK8 340 aaPredicted RBP21.65■■□□□ 1.06
PDCD4-203ENST00000444997 CLUAP1Q96AJ1 413 aa21.65■■□□□ 1.06
PDCD4-203ENST00000444997 ZIC5Q96T25 663 aa21.65■■□□□ 1.06
PDCD4-203ENST00000444997 PCDHAC2Q9Y5I4 1007 aa21.65■■□□□ 1.06
PDCD4-203ENST00000444997 PAPPA2Q9BXP8 1791 aa21.65■■□□□ 1.06
PDCD4-203ENST00000444997 ATP2B3Q16720 1220 aa21.64■■□□□ 1.05
PDCD4-203ENST00000444997 RASAL3Q86YV0 1011 aa21.64■■□□□ 1.05
PDCD4-203ENST00000444997 TSKSQ9UJT2 592 aa21.64■■□□□ 1.05
PDCD4-203ENST00000444997 SRGAP3O43295 1099 aa21.63■■□□□ 1.05
PDCD4-203ENST00000444997 TNFAIP1Q13829 316 aa21.63■■□□□ 1.05
PDCD4-203ENST00000444997 PRKG1Q13976 671 aa21.63■■□□□ 1.05
PDCD4-203ENST00000444997 SUPT20HL1Q3ZLR7 823 aa21.63■■□□□ 1.05
PDCD4-203ENST00000444997 COPRSQ9NQ92 184 aa21.63■■□□□ 1.05
PDCD4-203ENST00000444997 GNL3LQ9NVN8 582 aaKnown RBP21.63■■□□□ 1.05
PDCD4-203ENST00000444997 CAPN15O75808 1086 aa21.62■■□□□ 1.05
PDCD4-203ENST00000444997 GNAI2P04899 355 aa21.62■■□□□ 1.05
PDCD4-203ENST00000444997 CRKP46108 304 aa21.62■■□□□ 1.05
PDCD4-203ENST00000444997 HDLBPQ00341 1268 aaKnown RBP21.62■■□□□ 1.05
PDCD4-203ENST00000444997 DZIP1LQ8IYY4 767 aaKnown RBP21.62■■□□□ 1.05
PDCD4-203ENST00000444997 PA2G4Q9UQ80 394 aaKnown RBP21.62■■□□□ 1.05
PDCD4-203ENST00000444997 SUGT1Q9Y2Z0 365 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms