RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 HHIPL1Q96JK4 782 aa13.67□□□□□ -0.22
SF3A1-203ENST00000444440 FAM84BQ96KN1 310 aaPredicted RBP13.67□□□□□ -0.22
SF3A1-203ENST00000444440 MEIS3Q99687 375 aa13.67□□□□□ -0.22
SF3A1-203ENST00000444440 GBA2Q9HCG7 927 aaPredicted RBP13.67□□□□□ -0.22
SF3A1-203ENST00000444440 MYO5AQ9Y4I1 1855 aaKnown RBP13.66□□□□□ -0.22
SF3A1-203ENST00000444440 FAM155AB1AL88 458 aaPredicted RBP13.66□□□□□ -0.22
SF3A1-203ENST00000444440 F8W031 263 aaPredicted RBP13.66□□□□□ -0.22
SF3A1-203ENST00000444440 HSPA8P11142 646 aaKnown RBP13.66□□□□□ -0.22
SF3A1-203ENST00000444440 HNRNPUQ00839 825 aaKnown RBP eCLIP13.66□□□□□ -0.22
SF3A1-203ENST00000444440 PTPN12Q05209 780 aaKnown RBP13.66□□□□□ -0.22
SF3A1-203ENST00000444440 GRIK5Q16478 980 aa13.66□□□□□ -0.22
SF3A1-203ENST00000444440 TDRD7Q8NHU6 1098 aaKnown RBP13.66□□□□□ -0.22
SF3A1-203ENST00000444440 COL1A1P02452 1464 aaPredicted RBP13.66□□□□□ -0.22
SF3A1-203ENST00000444440 MYH2Q9UKX2 1941 aa13.66□□□□□ -0.22
SF3A1-203ENST00000444440 SSC5DA1L4H1 1573 aa13.66□□□□□ -0.22
SF3A1-203ENST00000444440 MROH5Q6ZUA9 1318 aa13.65□□□□□ -0.22
SF3A1-203ENST00000444440 ECE1P42892 770 aa13.65□□□□□ -0.22
SF3A1-203ENST00000444440 LBX1P52954 281 aa13.65□□□□□ -0.22
SF3A1-203ENST00000444440 METTL24Q5JXM2 366 aa13.65□□□□□ -0.22
SF3A1-203ENST00000444440 ATG9AQ7Z3C6 839 aa13.65□□□□□ -0.22
SF3A1-203ENST00000444440 API5Q9BZZ5 524 aaKnown RBP13.65□□□□□ -0.22
SF3A1-203ENST00000444440 TSKSQ9UJT2 592 aa13.65□□□□□ -0.22
SF3A1-203ENST00000444440 IQSEC3Q9UPP2 1182 aaPredicted RBP13.65□□□□□ -0.22
SF3A1-203ENST00000444440 LRRFIP2Q9Y608 721 aaKnown RBP13.65□□□□□ -0.22
SF3A1-203ENST00000444440 FAM205AQ6ZU69 1335 aa13.64□□□□□ -0.23
SF3A1-203ENST00000444440 PDE8BO95263 885 aa13.64□□□□□ -0.23
SF3A1-203ENST00000444440 UBTFL1P0CB47 393 aaPredicted RBP13.64□□□□□ -0.23
SF3A1-203ENST00000444440 TRIM27P14373 513 aa13.64□□□□□ -0.23
SF3A1-203ENST00000444440 FGFR2P21802 821 aa13.64□□□□□ -0.23
SF3A1-203ENST00000444440 HIBADHP31937 336 aaKnown RBP13.64□□□□□ -0.23
SF3A1-203ENST00000444440 FBXO33Q7Z6M2 555 aa13.64□□□□□ -0.23
SF3A1-203ENST00000444440 OGFOD1Q8N543 542 aa13.64□□□□□ -0.23
SF3A1-203ENST00000444440 PA2G4Q9UQ80 394 aaKnown RBP13.64□□□□□ -0.23
SF3A1-203ENST00000444440 KIF16BQ96L93 1317 aa13.64□□□□□ -0.23
SF3A1-203ENST00000444440 AK9Q5TCS8 1911 aa13.63□□□□□ -0.23
SF3A1-203ENST00000444440 EYA2O00167 538 aa13.63□□□□□ -0.23
SF3A1-203ENST00000444440 CTCFP49711 727 aaPredicted RBP13.63□□□□□ -0.23
SF3A1-203ENST00000444440 FKBP1AP62942 108 aaKnown RBP13.63□□□□□ -0.23
SF3A1-203ENST00000444440 INTS3Q68E01 1043 aaKnown RBP13.63□□□□□ -0.23
SF3A1-203ENST00000444440 RGMBQ6NW40 437 aa13.63□□□□□ -0.23
SF3A1-203ENST00000444440 TNS4Q8IZW8 715 aa13.63□□□□□ -0.23
SF3A1-203ENST00000444440 C2orf69Q8N8R5 385 aa13.63□□□□□ -0.23
SF3A1-203ENST00000444440 AIDAQ96BJ3 306 aa13.63□□□□□ -0.23
SF3A1-203ENST00000444440 SIL1Q9H173 461 aa13.63□□□□□ -0.23
SF3A1-203ENST00000444440 FZD1Q9UP38 647 aa13.63□□□□□ -0.23
SF3A1-203ENST00000444440 CLRN2A0PK11 232 aa13.62□□□□□ -0.23
SF3A1-203ENST00000444440 MAP2K2P36507 400 aa13.62□□□□□ -0.23
SF3A1-203ENST00000444440 BCAMP50895 628 aa13.62□□□□□ -0.23
SF3A1-203ENST00000444440 MAP2K1Q02750 393 aaPredicted RBP13.62□□□□□ -0.23
SF3A1-203ENST00000444440 CFAP100Q494V2 611 aa13.62□□□□□ -0.23
SF3A1-203ENST00000444440 MFSD14BQ5SR56 506 aa13.62□□□□□ -0.23
SF3A1-203ENST00000444440 MTMR14Q8NCE2 650 aa13.62□□□□□ -0.23
SF3A1-203ENST00000444440 ARHGAP45Q92619 1136 aa13.62□□□□□ -0.23
SF3A1-203ENST00000444440 PRMT6Q96LA8 375 aaPredicted RBP13.62□□□□□ -0.23
SF3A1-203ENST00000444440 HDAC9Q9UKV0 1011 aa13.62□□□□□ -0.23
SF3A1-203ENST00000444440 SPDYE2BA6NHP3 402 aa13.61□□□□□ -0.23
SF3A1-203ENST00000444440 UBE2Q2LH0YL09 131 aa13.61□□□□□ -0.23
SF3A1-203ENST00000444440 SLC10A3P09131 477 aa13.61□□□□□ -0.23
SF3A1-203ENST00000444440 SPDYE6P0CI01 402 aa13.61□□□□□ -0.23
SF3A1-203ENST00000444440 ZNF157P51786 506 aaPredicted RBP13.61□□□□□ -0.23
SF3A1-203ENST00000444440 DLGAP5Q15398 846 aa13.61□□□□□ -0.23
SF3A1-203ENST00000444440 ATF7IPQ6VMQ6 1270 aa13.61□□□□□ -0.23
SF3A1-203ENST00000444440 RASAL3Q86YV0 1011 aa13.61□□□□□ -0.23
SF3A1-203ENST00000444440 FRAT1Q92837 279 aaPredicted RBP13.61□□□□□ -0.23
SF3A1-203ENST00000444440 CLUAP1Q96AJ1 413 aa13.61□□□□□ -0.23
SF3A1-203ENST00000444440 PRDM10Q9NQV6 1147 aa13.61□□□□□ -0.23
SF3A1-203ENST00000444440 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.61□□□□□ -0.23
SF3A1-203ENST00000444440 MMP14P50281 582 aa13.6□□□□□ -0.23
SF3A1-203ENST00000444440 CHAF1AQ13111 956 aaPredicted RBP13.6□□□□□ -0.23
SF3A1-203ENST00000444440 CDK5RAP2Q96SN8 1893 aa13.6□□□□□ -0.23
SF3A1-203ENST00000444440 KIF23Q02241 960 aaPredicted RBP13.59□□□□□ -0.23
SF3A1-203ENST00000444440 NOGQ13253 232 aa13.59□□□□□ -0.23
SF3A1-203ENST00000444440 PRKG1Q13976 671 aa13.59□□□□□ -0.23
SF3A1-203ENST00000444440 PUM3Q15397 648 aaKnown RBP13.59□□□□□ -0.23
SF3A1-203ENST00000444440 APOBEC3FQ8IUX4 373 aaKnown RBP13.59□□□□□ -0.23
SF3A1-203ENST00000444440 CDAN1Q8IWY9 1227 aa13.59□□□□□ -0.23
SF3A1-203ENST00000444440 TTF2Q9UNY4 1162 aaKnown RBP13.59□□□□□ -0.23
SF3A1-203ENST00000444440 DOCK2Q92608 1830 aa13.59□□□□□ -0.23
SF3A1-203ENST00000444440 TMEM57Q8N5G2 664 aa13.58□□□□□ -0.24
SF3A1-203ENST00000444440 DEFB129Q9H1M3 183 aa13.58□□□□□ -0.24
SF3A1-203ENST00000444440 ZBED9Q6R2W3 1325 aa13.58□□□□□ -0.24
SF3A1-203ENST00000444440 CAPN15O75808 1086 aa13.57□□□□□ -0.24
SF3A1-203ENST00000444440 CIAO1O76071 339 aa13.57□□□□□ -0.24
SF3A1-203ENST00000444440 RLBP1P12271 317 aa13.57□□□□□ -0.24
SF3A1-203ENST00000444440 ADORA1P30542 326 aa13.57□□□□□ -0.24
SF3A1-203ENST00000444440 CRKP46108 304 aa13.57□□□□□ -0.24
SF3A1-203ENST00000444440 RBM5P52756 815 aaKnown RBP eCLIP13.57□□□□□ -0.24
SF3A1-203ENST00000444440 FKBP1BP68106 108 aa13.57□□□□□ -0.24
SF3A1-203ENST00000444440 CAVIN4Q5BKX8 364 aa13.57□□□□□ -0.24
SF3A1-203ENST00000444440 VPS37DQ86XT2 251 aa13.57□□□□□ -0.24
SF3A1-203ENST00000444440 LPIN2Q92539 896 aa13.57□□□□□ -0.24
SF3A1-203ENST00000444440 CSRNP1Q96S65 589 aa13.57□□□□□ -0.24
SF3A1-203ENST00000444440 TDRD3Q9H7E2 651 aaKnown RBP13.57□□□□□ -0.24
SF3A1-203ENST00000444440 VEZTQ9HBM0 779 aa13.57□□□□□ -0.24
SF3A1-203ENST00000444440 COPRSQ9NQ92 184 aa13.57□□□□□ -0.24
SF3A1-203ENST00000444440 PNMA6EA0A0J9YXQ4 647 aa13.56□□□□□ -0.24
SF3A1-203ENST00000444440 IFIT1P09914 478 aaKnown RBP13.56□□□□□ -0.24
SF3A1-203ENST00000444440 SLC5A1P13866 664 aa13.56□□□□□ -0.24
SF3A1-203ENST00000444440 MTX1Q13505 466 aa13.56□□□□□ -0.24
SF3A1-203ENST00000444440 ATP2B3Q16720 1220 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms