RNA–Protein interactions for RNA: ENST00000442714.5

HDLBP-219, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-219ENST00000442714 SLC10A4Q96EP9 437 aa12.88□□□□□ -0.35
HDLBP-219ENST00000442714 C9orf78Q9NZ63 289 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-219ENST00000442714 CHMP3Q9Y3E7 222 aa12.88□□□□□ -0.35
HDLBP-219ENST00000442714 SPDYE2BA6NHP3 402 aa12.87□□□□□ -0.35
HDLBP-219ENST00000442714 UNCXA6NJT0 531 aa12.87□□□□□ -0.35
HDLBP-219ENST00000442714 PLIN1O60240 522 aa12.87□□□□□ -0.35
HDLBP-219ENST00000442714 SPDYE6P0CI01 402 aa12.87□□□□□ -0.35
HDLBP-219ENST00000442714 INHBEP58166 350 aa12.87□□□□□ -0.35
HDLBP-219ENST00000442714 PKN2Q16513 984 aaKnown RBP12.87□□□□□ -0.35
HDLBP-219ENST00000442714 CFAP100Q494V2 611 aa12.87□□□□□ -0.35
HDLBP-219ENST00000442714 SPRYD7Q5W111 196 aa12.87□□□□□ -0.35
HDLBP-219ENST00000442714 ZNF804AQ7Z570 1209 aa12.87□□□□□ -0.35
HDLBP-219ENST00000442714 FAM9BQ8IZU0 186 aa12.87□□□□□ -0.35
HDLBP-219ENST00000442714 TDRD7Q8NHU6 1098 aaKnown RBP12.87□□□□□ -0.35
HDLBP-219ENST00000442714 ZNF296Q8WUU4 475 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-219ENST00000442714 FAM84BQ96KN1 310 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-219ENST00000442714 CFHR5Q9BXR6 569 aa12.87□□□□□ -0.35
HDLBP-219ENST00000442714 PUS3Q9BZE2 481 aaKnown RBP12.87□□□□□ -0.35
HDLBP-219ENST00000442714 SRCIN1Q9C0H9 1055 aa12.87□□□□□ -0.35
HDLBP-219ENST00000442714 R3HDMLQ9H3Y0 253 aa12.87□□□□□ -0.35
HDLBP-219ENST00000442714 ANGEL1Q9UNK9 670 aaKnown RBP12.87□□□□□ -0.35
HDLBP-219ENST00000442714 RIPOR2Q9Y4F9 1068 aa12.87□□□□□ -0.35
HDLBP-219ENST00000442714 FAM205AQ6ZU69 1335 aa12.87□□□□□ -0.35
HDLBP-219ENST00000442714 F8W031 263 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-219ENST00000442714 GPR25O00155 361 aa12.86□□□□□ -0.35
HDLBP-219ENST00000442714 NBPF7P0C2Y1 421 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-219ENST00000442714 MKRN3Q13064 507 aaKnown RBP12.86□□□□□ -0.35
HDLBP-219ENST00000442714 UBE4AQ14139 1066 aa12.86□□□□□ -0.35
HDLBP-219ENST00000442714 SUPT20HL1Q3ZLR7 823 aa12.86□□□□□ -0.35
HDLBP-219ENST00000442714 SLC4A10Q6U841 1118 aa12.86□□□□□ -0.35
HDLBP-219ENST00000442714 CNNM1Q9NRU3 951 aa12.86□□□□□ -0.35
HDLBP-219ENST00000442714 FZD1Q9UP38 647 aa12.86□□□□□ -0.35
HDLBP-219ENST00000442714 UTYO14607 1347 aa12.86□□□□□ -0.35
HDLBP-219ENST00000442714 AOX1Q06278 1338 aa12.86□□□□□ -0.35
HDLBP-219ENST00000442714 USP2O75604 605 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-219ENST00000442714 HIBADHP31937 336 aaKnown RBP12.85□□□□□ -0.35
HDLBP-219ENST00000442714 SREBF2Q12772 1141 aa12.85□□□□□ -0.35
HDLBP-219ENST00000442714 TAF7LQ5H9L4 462 aa12.85□□□□□ -0.35
HDLBP-219ENST00000442714 NBPF12Q5TAG4 269 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-219ENST00000442714 SUCLG2Q96I99 432 aa12.85□□□□□ -0.35
HDLBP-219ENST00000442714 HPS5Q9UPZ3 1129 aa12.85□□□□□ -0.35
HDLBP-219ENST00000442714 JAG2Q9Y219 1238 aa12.85□□□□□ -0.35
HDLBP-219ENST00000442714 PPP2R3BQ9Y5P8 575 aa12.85□□□□□ -0.35
HDLBP-219ENST00000442714 ZNF521Q96K83 1311 aa12.85□□□□□ -0.35
HDLBP-219ENST00000442714 CLRN2A0PK11 232 aa12.84□□□□□ -0.35
HDLBP-219ENST00000442714 MYO1BO43795 1136 aa12.84□□□□□ -0.35
HDLBP-219ENST00000442714 PPP1R12BO60237 982 aaPredicted RBP12.84□□□□□ -0.35
HDLBP-219ENST00000442714 GYG1P46976 350 aa12.84□□□□□ -0.35
HDLBP-219ENST00000442714 FBXO33Q7Z6M2 555 aa12.84□□□□□ -0.35
HDLBP-219ENST00000442714 MRPL50Q8N5N7 158 aaKnown RBP12.84□□□□□ -0.35
HDLBP-219ENST00000442714 CLMNQ96JQ2 1002 aa12.84□□□□□ -0.35
HDLBP-219ENST00000442714 ALDH1A1P00352 501 aa12.83□□□□□ -0.36
HDLBP-219ENST00000442714 RASA3Q14644 834 aa12.83□□□□□ -0.36
HDLBP-219ENST00000442714 RABL6Q3YEC7 729 aaPredicted RBP12.83□□□□□ -0.36
HDLBP-219ENST00000442714 IFNL1Q8IU54 200 aa12.83□□□□□ -0.36
HDLBP-219ENST00000442714 SERPINA10Q9UK55 444 aa12.83□□□□□ -0.36
HDLBP-219ENST00000442714 MANSC4A6NHS7 340 aaPredicted RBP12.82□□□□□ -0.36
HDLBP-219ENST00000442714 FKTNO75072 461 aa12.82□□□□□ -0.36
HDLBP-219ENST00000442714 SLC34A2O95436 690 aa12.82□□□□□ -0.36
HDLBP-219ENST00000442714 ZBTB48P10074 688 aaPredicted RBP12.82□□□□□ -0.36
HDLBP-219ENST00000442714 RBM5P52756 815 aaKnown RBP eCLIP12.82□□□□□ -0.36
HDLBP-219ENST00000442714 SOX10P56693 466 aa12.82□□□□□ -0.36
HDLBP-219ENST00000442714 MFSD14BQ5SR56 506 aa12.82□□□□□ -0.36
HDLBP-219ENST00000442714 ANKRD44Q8N8A2 993 aa12.82□□□□□ -0.36
HDLBP-219ENST00000442714 MRIQ9BWK5 157 aa12.82□□□□□ -0.36
HDLBP-219ENST00000442714 USP44Q9H0E7 712 aa12.82□□□□□ -0.36
HDLBP-219ENST00000442714 ZNF70Q9UC06 446 aaPredicted RBP12.82□□□□□ -0.36
HDLBP-219ENST00000442714 PAPPA2Q9BXP8 1791 aa12.81□□□□□ -0.36
HDLBP-219ENST00000442714 GRIK5Q16478 980 aa12.81□□□□□ -0.36
HDLBP-219ENST00000442714 LRRC24Q50LG9 513 aa12.81□□□□□ -0.36
HDLBP-219ENST00000442714 DZIP1LQ8IYY4 767 aaKnown RBP12.81□□□□□ -0.36
HDLBP-219ENST00000442714 WNK4Q96J92 1243 aa12.81□□□□□ -0.36
HDLBP-219ENST00000442714 TEPSINQ96N21 525 aa12.81□□□□□ -0.36
HDLBP-219ENST00000442714 BICC1Q9H694 974 aaKnown RBP12.81□□□□□ -0.36
HDLBP-219ENST00000442714 TDRD3Q9H7E2 651 aaKnown RBP12.81□□□□□ -0.36
HDLBP-219ENST00000442714 VEZTQ9HBM0 779 aa12.81□□□□□ -0.36
HDLBP-219ENST00000442714 TTF2Q9UNY4 1162 aaKnown RBP12.81□□□□□ -0.36
HDLBP-219ENST00000442714 MROH5Q6ZUA9 1318 aa12.81□□□□□ -0.36
HDLBP-219ENST00000442714 TESPA1A2RU30 521 aaPredicted RBP12.8□□□□□ -0.36
HDLBP-219ENST00000442714 IGF2BP3O00425 579 aaKnown RBP eCLIP12.8□□□□□ -0.36
HDLBP-219ENST00000442714 PDE8BO95263 885 aa12.8□□□□□ -0.36
HDLBP-219ENST00000442714 GJA5P36382 358 aa12.8□□□□□ -0.36
HDLBP-219ENST00000442714 IREB2P48200 963 aaKnown RBP12.8□□□□□ -0.36
HDLBP-219ENST00000442714 SPDYE2Q495Y8 402 aa12.8□□□□□ -0.36
HDLBP-219ENST00000442714 FBXO46Q6PJ61 603 aaPredicted RBP12.8□□□□□ -0.36
HDLBP-219ENST00000442714 VGLL2Q8N8G2 317 aa12.8□□□□□ -0.36
HDLBP-219ENST00000442714 SSH1Q8WYL5 1049 aa12.8□□□□□ -0.36
HDLBP-219ENST00000442714 PTPN18Q99952 460 aa12.8□□□□□ -0.36
HDLBP-219ENST00000442714 HDLBPQ00341 1268 aaKnown RBP12.79□□□□□ -0.36
HDLBP-219ENST00000442714 ANKRD13AQ8IZ07 590 aa12.79□□□□□ -0.36
HDLBP-219ENST00000442714 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.79□□□□□ -0.36
HDLBP-219ENST00000442714 PSME4Q14997 1843 aa12.78□□□□□ -0.36
HDLBP-219ENST00000442714 COL1A1P02452 1464 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-219ENST00000442714 TNRC18O15417 2968 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-219ENST00000442714 CRKP46108 304 aa12.78□□□□□ -0.36
HDLBP-219ENST00000442714 BCAMP50895 628 aa12.78□□□□□ -0.36
HDLBP-219ENST00000442714 SLFN5Q08AF3 891 aa12.78□□□□□ -0.36
HDLBP-219ENST00000442714 TNFAIP1Q13829 316 aa12.78□□□□□ -0.36
HDLBP-219ENST00000442714 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-219ENST00000442714 CDAN1Q8IWY9 1227 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms