RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 CLUAP1Q96AJ1 413 aa22.75■■□□□ 1.23
SMPD4-210ENST00000441135 CDCA5Q96FF9 252 aa22.75■■□□□ 1.23
SMPD4-210ENST00000441135 RIPOR2Q9Y4F9 1068 aa22.75■■□□□ 1.23
SMPD4-210ENST00000441135 FKBP1AP62942 108 aaKnown RBP22.74■■□□□ 1.23
SMPD4-210ENST00000441135 KIAA0825Q8IV33 1275 aa22.74■■□□□ 1.23
SMPD4-210ENST00000441135 TMEM57Q8N5G2 664 aa22.74■■□□□ 1.23
SMPD4-210ENST00000441135 PUS3Q9BZE2 481 aaKnown RBP22.74■■□□□ 1.23
SMPD4-210ENST00000441135 WNT10BO00744 389 aa22.73■■□□□ 1.23
SMPD4-210ENST00000441135 MTX1Q13505 466 aa22.73■■□□□ 1.23
SMPD4-210ENST00000441135 NBPF9Q3BBW0 867 aa22.73■■□□□ 1.23
SMPD4-210ENST00000441135 TNS4Q8IZW8 715 aa22.73■■□□□ 1.23
SMPD4-210ENST00000441135 BEGAINQ9BUH8 593 aa22.73■■□□□ 1.23
SMPD4-210ENST00000441135 PRDM10Q9NQV6 1147 aa22.73■■□□□ 1.23
SMPD4-210ENST00000441135 FBXO3Q9UK99 471 aa22.73■■□□□ 1.23
SMPD4-210ENST00000441135 LRRFIP2Q9Y608 721 aaKnown RBP22.73■■□□□ 1.23
SMPD4-210ENST00000441135 RFX5P48382 616 aaPredicted RBP22.72■■□□□ 1.23
SMPD4-210ENST00000441135 AOC2O75106 756 aa22.71■■□□□ 1.23
SMPD4-210ENST00000441135 SASH1O94885 1247 aa22.71■■□□□ 1.23
SMPD4-210ENST00000441135 FKBP1BP68106 108 aa22.71■■□□□ 1.23
SMPD4-210ENST00000441135 NOGQ13253 232 aa22.71■■□□□ 1.23
SMPD4-210ENST00000441135 METTL24Q5JXM2 366 aa22.71■■□□□ 1.23
SMPD4-210ENST00000441135 CERS5Q8N5B7 392 aa22.71■■□□□ 1.23
SMPD4-210ENST00000441135 GNAI2P04899 355 aa22.7■■□□□ 1.22
SMPD4-210ENST00000441135 RLBP1P12271 317 aa22.7■■□□□ 1.22
SMPD4-210ENST00000441135 HIBADHP31937 336 aaKnown RBP22.7■■□□□ 1.22
SMPD4-210ENST00000441135 RGMBQ6NW40 437 aa22.7■■□□□ 1.22
SMPD4-210ENST00000441135 FAM205AQ6ZU69 1335 aa22.69■■□□□ 1.22
SMPD4-210ENST00000441135 PTPN12Q05209 780 aaKnown RBP22.69■■□□□ 1.22
SMPD4-210ENST00000441135 LRRC24Q50LG9 513 aa22.69■■□□□ 1.22
SMPD4-210ENST00000441135 APOBEC3FQ8IUX4 373 aaKnown RBP22.69■■□□□ 1.22
SMPD4-210ENST00000441135 TDRD7Q8NHU6 1098 aaKnown RBP22.69■■□□□ 1.22
SMPD4-210ENST00000441135 CCDC102AQ96A19 550 aa22.69■■□□□ 1.22
SMPD4-210ENST00000441135 ZBED3Q96IU2 234 aaPredicted RBP22.69■■□□□ 1.22
SMPD4-210ENST00000441135 POLR2AP24928 1970 aaKnown RBP22.69■■□□□ 1.22
SMPD4-210ENST00000441135 PDE8BO95263 885 aa22.68■■□□□ 1.22
SMPD4-210ENST00000441135 HSPA8P11142 646 aaKnown RBP22.68■■□□□ 1.22
SMPD4-210ENST00000441135 GYG1P46976 350 aa22.68■■□□□ 1.22
SMPD4-210ENST00000441135 DLGAP5Q15398 846 aa22.68■■□□□ 1.22
SMPD4-210ENST00000441135 VGLL2Q8N8G2 317 aa22.68■■□□□ 1.22
SMPD4-210ENST00000441135 MTMR14Q8NCE2 650 aa22.68■■□□□ 1.22
SMPD4-210ENST00000441135 FAM84BQ96KN1 310 aaPredicted RBP22.68■■□□□ 1.22
SMPD4-210ENST00000441135 EYA2O00167 538 aa22.67■■□□□ 1.22
SMPD4-210ENST00000441135 CA12O43570 354 aa22.67■■□□□ 1.22
SMPD4-210ENST00000441135 CIAO1O76071 339 aa22.67■■□□□ 1.22
SMPD4-210ENST00000441135 LBX1P52954 281 aa22.67■■□□□ 1.22
SMPD4-210ENST00000441135 VPS37DQ86XT2 251 aa22.67■■□□□ 1.22
SMPD4-210ENST00000441135 ITPRIPQ8IWB1 547 aa22.67■■□□□ 1.22
SMPD4-210ENST00000441135 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.67■■□□□ 1.22
SMPD4-210ENST00000441135 KLHDC4Q8TBB5 520 aa22.67■■□□□ 1.22
SMPD4-210ENST00000441135 COPRSQ9NQ92 184 aa22.67■■□□□ 1.22
SMPD4-210ENST00000441135 PAPPA2Q9BXP8 1791 aa22.67■■□□□ 1.22
SMPD4-210ENST00000441135 CAVIN4Q5BKX8 364 aa22.66■■□□□ 1.22
SMPD4-210ENST00000441135 COL1A1P02452 1464 aaPredicted RBP22.66■■□□□ 1.22
SMPD4-210ENST00000441135 ZBTB7BO15156 539 aaPredicted RBP22.65■■□□□ 1.22
SMPD4-210ENST00000441135 NF2P35240 595 aa22.65■■□□□ 1.22
SMPD4-210ENST00000441135 ZNF157P51786 506 aaPredicted RBP22.65■■□□□ 1.22
SMPD4-210ENST00000441135 PUM3Q15397 648 aaKnown RBP22.65■■□□□ 1.22
SMPD4-210ENST00000441135 MFSD14BQ5SR56 506 aa22.65■■□□□ 1.22
SMPD4-210ENST00000441135 FBXO33Q7Z6M2 555 aa22.65■■□□□ 1.22
SMPD4-210ENST00000441135 JAG2Q9Y219 1238 aa22.65■■□□□ 1.22
SMPD4-210ENST00000441135 FAM155AB1AL88 458 aaPredicted RBP22.64■■□□□ 1.21
SMPD4-210ENST00000441135 F8W031 263 aaPredicted RBP22.64■■□□□ 1.21
SMPD4-210ENST00000441135 MYO1BO43795 1136 aa22.64■■□□□ 1.21
SMPD4-210ENST00000441135 PDE3AQ14432 1141 aa22.64■■□□□ 1.21
SMPD4-210ENST00000441135 SCAF8Q9UPN6 1271 aaKnown RBP22.64■■□□□ 1.21
SMPD4-210ENST00000441135 SPDYE2BA6NHP3 402 aa22.63■■□□□ 1.21
SMPD4-210ENST00000441135 SPDYE6P0CI01 402 aa22.63■■□□□ 1.21
SMPD4-210ENST00000441135 CFAP100Q494V2 611 aa22.63■■□□□ 1.21
SMPD4-210ENST00000441135 PANK1Q8TE04 598 aa22.63■■□□□ 1.21
SMPD4-210ENST00000441135 SRGAP3O43295 1099 aa22.62■■□□□ 1.21
SMPD4-210ENST00000441135 SLC10A3P09131 477 aa22.62■■□□□ 1.21
SMPD4-210ENST00000441135 IFIT1P09914 478 aaKnown RBP22.62■■□□□ 1.21
SMPD4-210ENST00000441135 MVPQ14764 893 aaKnown RBP22.62■■□□□ 1.21
SMPD4-210ENST00000441135 ATG9AQ7Z3C6 839 aa22.62■■□□□ 1.21
SMPD4-210ENST00000441135 YTHDC1Q96MU7 727 aaKnown RBP22.62■■□□□ 1.21
SMPD4-210ENST00000441135 CHMP4BQ9H444 224 aaKnown RBP22.62■■□□□ 1.21
SMPD4-210ENST00000441135 FGFR2P21802 821 aa22.61■■□□□ 1.21
SMPD4-210ENST00000441135 IL15P40933 162 aaPredicted RBP22.61■■□□□ 1.21
SMPD4-210ENST00000441135 PRAMEF18Q5VWM3 479 aa22.61■■□□□ 1.21
SMPD4-210ENST00000441135 TBC1D22AQ8WUA7 517 aa22.61■■□□□ 1.21
SMPD4-210ENST00000441135 SERPINA10Q9UK55 444 aa22.61■■□□□ 1.21
SMPD4-210ENST00000441135 DDX19BQ9UMR2 479 aa22.61■■□□□ 1.21
SMPD4-210ENST00000441135 PPP2R3BQ9Y5P8 575 aa22.61■■□□□ 1.21
SMPD4-210ENST00000441135 FRAT2O75474 233 aaPredicted RBP22.6■■□□□ 1.21
SMPD4-210ENST00000441135 SLC5A1P13866 664 aa22.6■■□□□ 1.21
SMPD4-210ENST00000441135 TTLL12Q14166 644 aaPredicted RBP22.6■■□□□ 1.21
SMPD4-210ENST00000441135 TTF2Q9UNY4 1162 aaKnown RBP22.6■■□□□ 1.21
SMPD4-210ENST00000441135 ARAP2Q8WZ64 1704 aa22.6■■□□□ 1.21
SMPD4-210ENST00000441135 RBM5P52756 815 aaKnown RBP eCLIP22.59■■□□□ 1.21
SMPD4-210ENST00000441135 RASAL3Q86YV0 1011 aa22.59■■□□□ 1.21
SMPD4-210ENST00000441135 LPIN2Q92539 896 aa22.59■■□□□ 1.21
SMPD4-210ENST00000441135 ZIC5Q96T25 663 aa22.59■■□□□ 1.21
SMPD4-210ENST00000441135 DEFB129Q9H1M3 183 aa22.59■■□□□ 1.21
SMPD4-210ENST00000441135 ATP8B2P98198 1209 aa22.58■■□□□ 1.21
SMPD4-210ENST00000441135 KIF23Q02241 960 aaPredicted RBP22.58■■□□□ 1.21
SMPD4-210ENST00000441135 POLA2Q14181 598 aa22.58■■□□□ 1.21
SMPD4-210ENST00000441135 REM2Q8IYK8 340 aaPredicted RBP22.58■■□□□ 1.21
SMPD4-210ENST00000441135 PRMT6Q96LA8 375 aaPredicted RBP22.58■■□□□ 1.21
SMPD4-210ENST00000441135 SIL1Q9H173 461 aa22.58■■□□□ 1.21
SMPD4-210ENST00000441135 IQSEC3Q9UPP2 1182 aaPredicted RBP22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms