RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 APOBEC3FQ8IUX4 373 aaKnown RBP20.47■□□□□ 0.87
SNRPD3-204ENST00000439775 PUS3Q9BZE2 481 aaKnown RBP20.47■□□□□ 0.87
SNRPD3-204ENST00000439775 COL1A1P02452 1464 aaPredicted RBP20.46■□□□□ 0.87
SNRPD3-204ENST00000439775 MTMR14Q8NCE2 650 aa20.46■□□□□ 0.87
SNRPD3-204ENST00000439775 ZIC5Q96T25 663 aa20.46■□□□□ 0.87
SNRPD3-204ENST00000439775 CAPN15O75808 1086 aa20.45■□□□□ 0.86
SNRPD3-204ENST00000439775 SCAF8Q9UPN6 1271 aaKnown RBP20.45■□□□□ 0.86
SNRPD3-204ENST00000439775 FAM205AQ6ZU69 1335 aa20.45■□□□□ 0.86
SNRPD3-204ENST00000439775 DLGAP5Q15398 846 aa20.44■□□□□ 0.86
SNRPD3-204ENST00000439775 TDRD7Q8NHU6 1098 aaKnown RBP20.44■□□□□ 0.86
SNRPD3-204ENST00000439775 HIBADHP31937 336 aaKnown RBP20.43■□□□□ 0.86
SNRPD3-204ENST00000439775 NF2P35240 595 aa20.43■□□□□ 0.86
SNRPD3-204ENST00000439775 LRRC24Q50LG9 513 aa20.43■□□□□ 0.86
SNRPD3-204ENST00000439775 RASAL3Q86YV0 1011 aa20.43■□□□□ 0.86
SNRPD3-204ENST00000439775 VGLL2Q8N8G2 317 aa20.43■□□□□ 0.86
SNRPD3-204ENST00000439775 FAM84BQ96KN1 310 aaPredicted RBP20.43■□□□□ 0.86
SNRPD3-204ENST00000439775 TSKSQ9UJT2 592 aa20.43■□□□□ 0.86
SNRPD3-204ENST00000439775 ARAP2Q8WZ64 1704 aa20.42■□□□□ 0.86
SNRPD3-204ENST00000439775 GYG1P46976 350 aa20.42■□□□□ 0.86
SNRPD3-204ENST00000439775 KIF23Q02241 960 aaPredicted RBP20.42■□□□□ 0.86
SNRPD3-204ENST00000439775 METTL24Q5JXM2 366 aa20.42■□□□□ 0.86
SNRPD3-204ENST00000439775 PRAMEF18Q5VWM3 479 aa20.42■□□□□ 0.86
SNRPD3-204ENST00000439775 SAGE1Q9NXZ1 904 aa20.42■□□□□ 0.86
SNRPD3-204ENST00000439775 SPDYE2BA6NHP3 402 aa20.41■□□□□ 0.86
SNRPD3-204ENST00000439775 PDE8BO95263 885 aa20.41■□□□□ 0.86
SNRPD3-204ENST00000439775 SPDYE6P0CI01 402 aa20.41■□□□□ 0.86
SNRPD3-204ENST00000439775 API5Q9BZZ5 524 aaKnown RBP20.41■□□□□ 0.86
SNRPD3-204ENST00000439775 NOB1Q9ULX3 412 aaKnown RBP20.41■□□□□ 0.86
SNRPD3-204ENST00000439775 F8W031 263 aaPredicted RBP20.4■□□□□ 0.86
SNRPD3-204ENST00000439775 CFAP100Q494V2 611 aa20.4■□□□□ 0.86
SNRPD3-204ENST00000439775 MFSD14BQ5SR56 506 aa20.4■□□□□ 0.86
SNRPD3-204ENST00000439775 ECM29Q5VYK3 1845 aa20.4■□□□□ 0.86
SNRPD3-204ENST00000439775 FBXO33Q7Z6M2 555 aa20.4■□□□□ 0.86
SNRPD3-204ENST00000439775 REM2Q8IYK8 340 aaPredicted RBP20.4■□□□□ 0.86
SNRPD3-204ENST00000439775 KIF16BQ96L93 1317 aa20.4■□□□□ 0.86
SNRPD3-204ENST00000439775 JAG2Q9Y219 1238 aa20.4■□□□□ 0.86
SNRPD3-204ENST00000439775 PPP2R3BQ9Y5P8 575 aa20.4■□□□□ 0.86
SNRPD3-204ENST00000439775 MYO1BO43795 1136 aa20.39■□□□□ 0.85
SNRPD3-204ENST00000439775 UBTFL1P0CB47 393 aaPredicted RBP20.39■□□□□ 0.85
SNRPD3-204ENST00000439775 RFX5P48382 616 aaPredicted RBP20.39■□□□□ 0.85
SNRPD3-204ENST00000439775 RARSP54136 660 aaKnown RBP20.39■□□□□ 0.85
SNRPD3-204ENST00000439775 MOB2Q70IA6 237 aa20.39■□□□□ 0.85
SNRPD3-204ENST00000439775 KLHDC4Q8TBB5 520 aa20.39■□□□□ 0.85
SNRPD3-204ENST00000439775 DEFB129Q9H1M3 183 aa20.39■□□□□ 0.85
SNRPD3-204ENST00000439775 UBE2Q2LH0YL09 131 aa20.38■□□□□ 0.85
SNRPD3-204ENST00000439775 TTLL12Q14166 644 aaPredicted RBP20.38■□□□□ 0.85
SNRPD3-204ENST00000439775 CAVIN4Q5BKX8 364 aa20.38■□□□□ 0.85
SNRPD3-204ENST00000439775 VPS37DQ86XT2 251 aa20.38■□□□□ 0.85
SNRPD3-204ENST00000439775 CSRNP1Q96S65 589 aa20.38■□□□□ 0.85
SNRPD3-204ENST00000439775 SERPINA10Q9UK55 444 aa20.38■□□□□ 0.85
SNRPD3-204ENST00000439775 PCDHAC2Q9Y5I4 1007 aa20.38■□□□□ 0.85
SNRPD3-204ENST00000439775 PTPN12Q05209 780 aaKnown RBP20.37■□□□□ 0.85
SNRPD3-204ENST00000439775 PUM3Q15397 648 aaKnown RBP20.37■□□□□ 0.85
SNRPD3-204ENST00000439775 ARMC9Q7Z3E5 817 aa20.37■□□□□ 0.85
SNRPD3-204ENST00000439775 ARHGAP45Q92619 1136 aa20.37■□□□□ 0.85
SNRPD3-204ENST00000439775 PRMT6Q96LA8 375 aaPredicted RBP20.37■□□□□ 0.85
SNRPD3-204ENST00000439775 EYA2O00167 538 aa20.36■□□□□ 0.85
SNRPD3-204ENST00000439775 FGFR2P21802 821 aa20.36■□□□□ 0.85
SNRPD3-204ENST00000439775 FBXO3Q9UK99 471 aa20.36■□□□□ 0.85
SNRPD3-204ENST00000439775 TTF2Q9UNY4 1162 aaKnown RBP20.36■□□□□ 0.85
SNRPD3-204ENST00000439775 HDAC5Q9UQL6 1122 aa20.36■□□□□ 0.85
SNRPD3-204ENST00000439775 SSC5DA1L4H1 1573 aa20.36■□□□□ 0.85
SNRPD3-204ENST00000439775 CLRN2A0PK11 232 aa20.35■□□□□ 0.85
SNRPD3-204ENST00000439775 RBM5P52756 815 aaKnown RBP eCLIP20.35■□□□□ 0.851e-7■■■■■ 26.9
SNRPD3-204ENST00000439775 TBC1D22AQ8WUA7 517 aa20.35■□□□□ 0.85
SNRPD3-204ENST00000439775 ABHD8Q96I13 439 aa20.35■□□□□ 0.85
SNRPD3-204ENST00000439775 RNF186Q9NXI6 227 aa20.35■□□□□ 0.85
SNRPD3-204ENST00000439775 AOX1Q06278 1338 aa20.34■□□□□ 0.85
SNRPD3-204ENST00000439775 IFIT1P09914 478 aaKnown RBP20.34■□□□□ 0.85
SNRPD3-204ENST00000439775 LDLRAD1Q5T700 205 aa20.34■□□□□ 0.85
SNRPD3-204ENST00000439775 CIAO1O76071 339 aa20.33■□□□□ 0.85
SNRPD3-204ENST00000439775 TNFAIP1Q13829 316 aa20.33■□□□□ 0.85
SNRPD3-204ENST00000439775 MAP3K11Q16584 847 aa20.33■□□□□ 0.85
SNRPD3-204ENST00000439775 SPDYE2Q495Y8 402 aa20.33■□□□□ 0.85
SNRPD3-204ENST00000439775 INTS3Q68E01 1043 aaKnown RBP20.33■□□□□ 0.85
SNRPD3-204ENST00000439775 ATG9AQ7Z3C6 839 aa20.33■□□□□ 0.85
SNRPD3-204ENST00000439775 LPIN2Q92539 896 aa20.33■□□□□ 0.85
SNRPD3-204ENST00000439775 VEZTQ9HBM0 779 aa20.33■□□□□ 0.85
SNRPD3-204ENST00000439775 IQSEC3Q9UPP2 1182 aaPredicted RBP20.33■□□□□ 0.85
SNRPD3-204ENST00000439775 FRAT2O75474 233 aaPredicted RBP20.32■□□□□ 0.84
SNRPD3-204ENST00000439775 TRPA1O75762 1119 aa20.32■□□□□ 0.84
SNRPD3-204ENST00000439775 BCAMP50895 628 aa20.32■□□□□ 0.84
SNRPD3-204ENST00000439775 HDLBPQ00341 1268 aaKnown RBP20.32■□□□□ 0.84
SNRPD3-204ENST00000439775 DZIP1LQ8IYY4 767 aaKnown RBP20.32■□□□□ 0.84
SNRPD3-204ENST00000439775 ANGEL1Q9UNK9 670 aaKnown RBP20.32■□□□□ 0.84
SNRPD3-204ENST00000439775 LRRFIP2Q9Y608 721 aaKnown RBP20.32■□□□□ 0.84
SNRPD3-204ENST00000439775 UNCXA6NJT0 531 aa20.31■□□□□ 0.84
SNRPD3-204ENST00000439775 PPP1R12BO60237 982 aaPredicted RBP20.31■□□□□ 0.84
SNRPD3-204ENST00000439775 SLC5A1P13866 664 aa20.31■□□□□ 0.84
SNRPD3-204ENST00000439775 CRKP46108 304 aa20.31■□□□□ 0.84
SNRPD3-204ENST00000439775 CHAF1AQ13111 956 aaPredicted RBP20.31■□□□□ 0.84
SNRPD3-204ENST00000439775 PRKG1Q13976 671 aa20.31■□□□□ 0.84
SNRPD3-204ENST00000439775 SUPT20HL1Q3ZLR7 823 aa20.31■□□□□ 0.84
SNRPD3-204ENST00000439775 MEIS3Q99687 375 aa20.31■□□□□ 0.84
SNRPD3-204ENST00000439775 ZNF70Q9UC06 446 aaPredicted RBP20.31■□□□□ 0.84
SNRPD3-204ENST00000439775 SUGT1Q9Y2Z0 365 aa20.31■□□□□ 0.84
SNRPD3-204ENST00000439775 AKAP11Q9UKA4 1901 aa20.31■□□□□ 0.84
SNRPD3-204ENST00000439775 RASA3Q14644 834 aa20.3■□□□□ 0.84
SNRPD3-204ENST00000439775 GRIK5Q16478 980 aa20.3■□□□□ 0.84
SNRPD3-204ENST00000439775 IPO8O15397 1037 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms