RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 FRAT2O75474 233 aaPredicted RBP19.89■□□□□ 0.77
SNRPB-202ENST00000438552 RPS12P25398 132 aaKnown RBP19.89■□□□□ 0.77
SNRPB-202ENST00000438552 MICALL2Q8IY33 904 aa19.89■□□□□ 0.77
SNRPB-202ENST00000438552 DBNDD2Q9BQY9 259 aa19.89■□□□□ 0.77
SNRPB-202ENST00000438552 BCL11AQ9H165 835 aa19.89■□□□□ 0.77
SNRPB-202ENST00000438552 TAF1DQ9H5J8 278 aaPredicted RBP19.89■□□□□ 0.77
SNRPB-202ENST00000438552 FAM205AQ6ZU69 1335 aa19.88■□□□□ 0.77
SNRPB-202ENST00000438552 EPHX2P34913 555 aa19.88■□□□□ 0.77
SNRPB-202ENST00000438552 GORABQ5T7V8 394 aa19.88■□□□□ 0.77
SNRPB-202ENST00000438552 CERS5Q8N5B7 392 aa19.88■□□□□ 0.77
SNRPB-202ENST00000438552 AGBL3Q8NEM8 1001 aa19.88■□□□□ 0.77
SNRPB-202ENST00000438552 EAF2Q96CJ1 260 aaPredicted RBP19.88■□□□□ 0.77
SNRPB-202ENST00000438552 GMLQ99445 158 aa19.88■□□□□ 0.77
SNRPB-202ENST00000438552 DCTPP1Q9H773 170 aa19.88■□□□□ 0.77
SNRPB-202ENST00000438552 DBNLQ9UJU6 430 aaKnown RBP19.88■□□□□ 0.77
SNRPB-202ENST00000438552 AKAP11Q9UKA4 1901 aa19.88■□□□□ 0.77
SNRPB-202ENST00000438552 MYO3BQ8WXR4 1341 aa19.87■□□□□ 0.77
SNRPB-202ENST00000438552 C1QTNF8P60827 252 aa19.87■□□□□ 0.77
SNRPB-202ENST00000438552 AACSQ86V21 672 aa19.87■□□□□ 0.77
SNRPB-202ENST00000438552 DPF2Q92785 391 aa19.87■□□□□ 0.77
SNRPB-202ENST00000438552 CCDC8Q9H0W5 538 aaPredicted RBP19.87■□□□□ 0.77
SNRPB-202ENST00000438552 CNOT7Q9UIV1 285 aaKnown RBP19.87■□□□□ 0.77
SNRPB-202ENST00000438552 SMARCA5O60264 1052 aaPredicted RBP19.86■□□□□ 0.77
SNRPB-202ENST00000438552 HDAC1Q13547 482 aaPredicted RBP19.86■□□□□ 0.77
SNRPB-202ENST00000438552 LRRCC1Q9C099 1032 aa19.86■□□□□ 0.77
SNRPB-202ENST00000438552 GNL3LQ9NVN8 582 aaKnown RBP19.86■□□□□ 0.77
SNRPB-202ENST00000438552 POTEIP0CG38 1075 aa19.85■□□□□ 0.77
SNRPB-202ENST00000438552 POTEJP0CG39 1038 aa19.85■□□□□ 0.77
SNRPB-202ENST00000438552 RASGRF1Q13972 1273 aa19.85■□□□□ 0.77
SNRPB-202ENST00000438552 EAPPQ56P03 285 aaPredicted RBP19.85■□□□□ 0.77
SNRPB-202ENST00000438552 MFSD14BQ5SR56 506 aa19.85■□□□□ 0.77
SNRPB-202ENST00000438552 KIAA0825Q8IV33 1275 aa19.85■□□□□ 0.77
SNRPB-202ENST00000438552 C16orf71Q8IYS4 520 aaPredicted RBP19.85■□□□□ 0.77
SNRPB-202ENST00000438552 CLASRPQ8N2M8 674 aaKnown RBP19.85■□□□□ 0.77
SNRPB-202ENST00000438552 TRPM4Q8TD43 1214 aa19.85■□□□□ 0.77
SNRPB-202ENST00000438552 ECM29Q5VYK3 1845 aa19.84■□□□□ 0.77
SNRPB-202ENST00000438552 EGFRP00533 1210 aa19.84■□□□□ 0.77
SNRPB-202ENST00000438552 ARID4AP29374 1257 aaPredicted RBP19.84■□□□□ 0.77
SNRPB-202ENST00000438552 ADARB2Q9NS39 739 aaKnown RBP19.84■□□□□ 0.77
SNRPB-202ENST00000438552 MYO5AQ9Y4I1 1855 aaKnown RBP19.84■□□□□ 0.77
SNRPB-202ENST00000438552 MAST2Q6P0Q8 1798 aa19.83■□□□□ 0.77
SNRPB-202ENST00000438552 F8W031 263 aaPredicted RBP19.83■□□□□ 0.77
SNRPB-202ENST00000438552 H7C1D1 291 aa19.83■□□□□ 0.77
SNRPB-202ENST00000438552 SEMA3EO15041 775 aa19.83■□□□□ 0.77
SNRPB-202ENST00000438552 USP17L8P0C7I0 530 aa19.83■□□□□ 0.77
SNRPB-202ENST00000438552 FKBP1AP62942 108 aaKnown RBP19.83■□□□□ 0.77
SNRPB-202ENST00000438552 SCARF1Q14162 830 aa19.83■□□□□ 0.77
SNRPB-202ENST00000438552 GRIK5Q16478 980 aa19.83■□□□□ 0.77
SNRPB-202ENST00000438552 TBC1D10BQ4KMP7 808 aaPredicted RBP19.83■□□□□ 0.77
SNRPB-202ENST00000438552 TTC39AQ5SRH9 613 aa19.83■□□□□ 0.77
SNRPB-202ENST00000438552 PI16Q6UXB8 463 aa19.83■□□□□ 0.77
SNRPB-202ENST00000438552 SAMD7Q7Z3H4 446 aa19.83■□□□□ 0.77
SNRPB-202ENST00000438552 DENND2AQ9ULE3 1009 aa19.83■□□□□ 0.77
SNRPB-202ENST00000438552 ZNF280AP59817 542 aaPredicted RBP19.82■□□□□ 0.76
SNRPB-202ENST00000438552 IGHDP01880 384 aa19.81■□□□□ 0.76
SNRPB-202ENST00000438552 IFIT2P09913 472 aaKnown RBP19.81■□□□□ 0.76
SNRPB-202ENST00000438552 UQCRFS1P1P0C7P4 283 aa19.81■□□□□ 0.76
SNRPB-202ENST00000438552 MCAMP43121 646 aa19.81■□□□□ 0.76
SNRPB-202ENST00000438552 KIF4BQ2VIQ3 1234 aa19.81■□□□□ 0.76
SNRPB-202ENST00000438552 CCDC158Q5M9N0 1113 aa19.81■□□□□ 0.76
SNRPB-202ENST00000438552 PNMA8AQ86V59 439 aaPredicted RBP19.81■□□□□ 0.76
SNRPB-202ENST00000438552 TBC1D22AQ8WUA7 517 aa19.81■□□□□ 0.76
SNRPB-202ENST00000438552 RWDD1Q9H446 243 aaPredicted RBP19.81■□□□□ 0.76
SNRPB-202ENST00000438552 HMG20BQ9P0W2 317 aa19.81■□□□□ 0.76
SNRPB-202ENST00000438552 DOCK2Q92608 1830 aa19.81■□□□□ 0.76
SNRPB-202ENST00000438552 PDS5AQ29RF7 1337 aaKnown RBP19.8■□□□□ 0.76
SNRPB-202ENST00000438552 ZBTB22O15209 634 aa19.8■□□□□ 0.76
SNRPB-202ENST00000438552 RBM26Q5T8P6 1007 aaKnown RBP19.8■□□□□ 0.76
SNRPB-202ENST00000438552 USP50Q70EL3 339 aaPredicted RBP19.8■□□□□ 0.76
SNRPB-202ENST00000438552 WDR66Q8TBY9 1149 aa19.8■□□□□ 0.76
SNRPB-202ENST00000438552 MYOZ2Q9NPC6 264 aa19.8■□□□□ 0.76
SNRPB-202ENST00000438552 TOMM70O94826 608 aa19.79■□□□□ 0.76
SNRPB-202ENST00000438552 HIRAP54198 1017 aaPredicted RBP19.79■□□□□ 0.76
SNRPB-202ENST00000438552 LDHDQ86WU2 507 aa19.79■□□□□ 0.76
SNRPB-202ENST00000438552 OGFOD1Q8N543 542 aa19.79■□□□□ 0.76
SNRPB-202ENST00000438552 SPATA5Q8NB90 893 aa19.79■□□□□ 0.76
SNRPB-202ENST00000438552 GCC1Q96CN9 775 aa19.79■□□□□ 0.76
SNRPB-202ENST00000438552 SNRKQ9NRH2 765 aa19.79■□□□□ 0.76
SNRPB-202ENST00000438552 HDAC9Q9UKV0 1011 aa19.79■□□□□ 0.76
SNRPB-202ENST00000438552 TTF2Q9UNY4 1162 aaKnown RBP19.79■□□□□ 0.76
SNRPB-202ENST00000438552 SALL1Q9NSC2 1324 aa19.78■□□□□ 0.76
SNRPB-202ENST00000438552 MYH2Q9UKX2 1941 aa19.78■□□□□ 0.76
SNRPB-202ENST00000438552 PRDX5P30044 214 aa19.78■□□□□ 0.76
SNRPB-202ENST00000438552 RBM46Q8TBY0 533 aaKnown RBP19.78■□□□□ 0.76
SNRPB-202ENST00000438552 CLEC11AQ9Y240 323 aa19.78■□□□□ 0.76
SNRPB-202ENST00000438552 NEFLP07196 543 aa19.77■□□□□ 0.76
SNRPB-202ENST00000438552 ZNF512BQ96KM6 892 aaPredicted RBP19.77■□□□□ 0.76
SNRPB-202ENST00000438552 PCDHAC2Q9Y5I4 1007 aa19.77■□□□□ 0.76
SNRPB-202ENST00000438552 POLR2AP24928 1970 aaKnown RBP19.77■□□□□ 0.75
SNRPB-202ENST00000438552 ASTN2O75129 1339 aaPredicted RBP19.76■□□□□ 0.75
SNRPB-202ENST00000438552 ANKRD45Q5TZF3 282 aa19.76■□□□□ 0.75
SNRPB-202ENST00000438552 CHADLQ6NUI6 762 aa19.76■□□□□ 0.75
SNRPB-202ENST00000438552 SMC5Q8IY18 1101 aa19.76■□□□□ 0.75
SNRPB-202ENST00000438552 ABCF2Q9UG63 623 aa19.76■□□□□ 0.75
SNRPB-202ENST00000438552 NDUFB9Q9Y6M9 179 aa19.76■□□□□ 0.75
SNRPB-202ENST00000438552 LDHBP07195 334 aaKnown RBP19.75■□□□□ 0.75
SNRPB-202ENST00000438552 ZAP70P43403 619 aa19.75■□□□□ 0.75
SNRPB-202ENST00000438552 CFAP100Q494V2 611 aa19.75■□□□□ 0.75
SNRPB-202ENST00000438552 MAP1SQ66K74 1059 aaPredicted RBP19.75■□□□□ 0.75
SNRPB-202ENST00000438552 TBC1D9Q6ZT07 1266 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms