RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 ASTLQ6HA08 431 aaPredicted RBP7.34□□□□□ -1.23
VRK2-206ENST00000435505 SPATC1Q76KD6 591 aa7.34□□□□□ -1.23
VRK2-206ENST00000435505 MYO1HQ8N1T3 1032 aa7.34□□□□□ -1.23
VRK2-206ENST00000435505 NEUROD6Q96NK8 337 aa7.34□□□□□ -1.23
VRK2-206ENST00000435505 UBP1Q9NZI7 540 aa7.34□□□□□ -1.23
VRK2-206ENST00000435505 CCDC39Q9UFE4 941 aa7.34□□□□□ -1.23
VRK2-206ENST00000435505 TAGLN3Q9UI15 199 aa7.34□□□□□ -1.23
VRK2-206ENST00000435505 PPT2Q9UMR5 302 aa7.34□□□□□ -1.23
VRK2-206ENST00000435505 PPP1R12BO60237 982 aaPredicted RBP7.33□□□□□ -1.24
VRK2-206ENST00000435505 MMP14P50281 582 aa7.33□□□□□ -1.24
VRK2-206ENST00000435505 KIAA2012Q0VF49 1180 aa7.33□□□□□ -1.24
VRK2-206ENST00000435505 NXPE4Q6UWF7 544 aa7.33□□□□□ -1.24
VRK2-206ENST00000435505 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.33□□□□□ -1.24
VRK2-206ENST00000435505 RELTQ969Z4 430 aa7.33□□□□□ -1.24
VRK2-206ENST00000435505 SHDQ96IW2 340 aa7.33□□□□□ -1.24
VRK2-206ENST00000435505 C2orf49Q9BVC5 232 aaPredicted RBP7.33□□□□□ -1.24
VRK2-206ENST00000435505 CASS4Q9NQ75 786 aa7.33□□□□□ -1.24
VRK2-206ENST00000435505 EVA1BQ9NVM1 165 aa7.33□□□□□ -1.24
VRK2-206ENST00000435505 NOB1Q9ULX3 412 aaKnown RBP7.33□□□□□ -1.24
VRK2-206ENST00000435505 HDAC5Q9UQL6 1122 aa7.33□□□□□ -1.24
VRK2-206ENST00000435505 PTCH2Q9Y6C5 1203 aa7.33□□□□□ -1.24
VRK2-206ENST00000435505 PLEKHH1Q9ULM0 1364 aa7.33□□□□□ -1.24
VRK2-206ENST00000435505 TULP2O00295 520 aa7.33□□□□□ -1.24
VRK2-206ENST00000435505 PDPK1O15530 556 aa7.33□□□□□ -1.24
VRK2-206ENST00000435505 MYCLP1P12525 358 aaPredicted RBP7.33□□□□□ -1.24
VRK2-206ENST00000435505 ZNF445P59923 1031 aa7.33□□□□□ -1.24
VRK2-206ENST00000435505 HMGN5P82970 282 aaKnown RBP7.33□□□□□ -1.24
VRK2-206ENST00000435505 MLECQ14165 292 aa7.33□□□□□ -1.24
VRK2-206ENST00000435505 VPS72Q15906 364 aa7.33□□□□□ -1.24
VRK2-206ENST00000435505 C1orf53Q5VUE5 145 aa7.33□□□□□ -1.24
VRK2-206ENST00000435505 BRICD5Q6PL45 260 aa7.33□□□□□ -1.24
VRK2-206ENST00000435505 LRP10Q7Z4F1 713 aa7.33□□□□□ -1.24
VRK2-206ENST00000435505 TIGD1Q96MW7 591 aa7.33□□□□□ -1.24
VRK2-206ENST00000435505 C22orf23Q9BZE7 217 aa7.33□□□□□ -1.24
VRK2-206ENST00000435505 PCDH10Q9P2E7 1040 aa7.33□□□□□ -1.24
VRK2-206ENST00000435505 AKAP10O43572 662 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 JUNDP17535 347 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 GABPB1Q06547 395 aaPredicted RBP7.32□□□□□ -1.24
VRK2-206ENST00000435505 DDR2Q16832 855 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 KLHL40Q2TBA0 621 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 NBPF20Q3BBV1 942 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 Q3C1V9 767 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 C2orf27AQ580R0 203 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 SH3PXD2AQ5TCZ1 1133 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 NBPF14Q5TI25 921 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 ZNF280DQ6N043 979 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 FBXL19Q6PCT2 694 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 CPLX3Q8WVH0 158 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 SMAD5Q99717 465 aaKnown RBP7.32□□□□□ -1.24
VRK2-206ENST00000435505 NAP1L4Q99733 375 aaKnown RBP7.32□□□□□ -1.24
VRK2-206ENST00000435505 PAGR1Q9BTK6 254 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 ASPSCR1Q9BZE9 553 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 INO80BQ9C086 356 aaPredicted RBP7.32□□□□□ -1.24
VRK2-206ENST00000435505 CCDC113Q9H0I3 377 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 RRP7BPQ9NSQ0 103 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 KIF3AQ9Y496 699 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.32□□□□□ -1.24
VRK2-206ENST00000435505 DDX49Q9Y6V7 483 aaKnown RBP7.32□□□□□ -1.24
VRK2-206ENST00000435505 ZMYM3Q14202 1370 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 KIF27Q86VH2 1401 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 CCDC66A2RUB6 948 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 SLFN14P0C7P3 912 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 CRKP46108 304 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 CBX2Q14781 532 aaPredicted RBP7.32□□□□□ -1.24
VRK2-206ENST00000435505 ZSCAN23Q3MJ62 389 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 INO80DQ53TQ3 878 aaPredicted RBP7.32□□□□□ -1.24
VRK2-206ENST00000435505 MPHOSPH9Q99550 1183 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 MAPK8IP1Q9UQF2 711 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 INSRP06213 1382 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 ANKRD30BQ9BXX2 1392 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 NINLQ9Y2I6 1382 aa7.32□□□□□ -1.24
VRK2-206ENST00000435505 EPB41L2O43491 1005 aaKnown RBP7.31□□□□□ -1.24
VRK2-206ENST00000435505 CCNYL3P0C7X3 344 aa7.31□□□□□ -1.24
VRK2-206ENST00000435505 STAT3P40763 770 aa7.31□□□□□ -1.24
VRK2-206ENST00000435505 ZAP70P43403 619 aa7.31□□□□□ -1.24
VRK2-206ENST00000435505 ST13P50502 369 aaKnown RBP7.31□□□□□ -1.24
VRK2-206ENST00000435505 FAM160A1Q05DH4 1040 aa7.31□□□□□ -1.24
VRK2-206ENST00000435505 ERFEQ4G0M1 354 aa7.31□□□□□ -1.24
VRK2-206ENST00000435505 C4orf48Q5BLP8 95 aa7.31□□□□□ -1.24
VRK2-206ENST00000435505 CAVIN1Q6NZI2 390 aaKnown RBP7.31□□□□□ -1.24
VRK2-206ENST00000435505 ZNF296Q8WUU4 475 aaPredicted RBP7.31□□□□□ -1.24
VRK2-206ENST00000435505 ANKRD7Q92527 254 aa7.31□□□□□ -1.24
VRK2-206ENST00000435505 USP3Q9Y6I4 520 aa7.31□□□□□ -1.24
VRK2-206ENST00000435505 SHROOM2Q13796 1616 aa7.31□□□□□ -1.24
VRK2-206ENST00000435505 AK9Q5TCS8 1911 aa7.31□□□□□ -1.24
VRK2-206ENST00000435505 A0A087X0B3 334 aa7.31□□□□□ -1.24
VRK2-206ENST00000435505 EIF4A3P38919 411 aaKnown RBP7.31□□□□□ -1.24
VRK2-206ENST00000435505 NFKB2Q00653 900 aa7.31□□□□□ -1.24
VRK2-206ENST00000435505 POU5F1BQ06416 359 aa7.31□□□□□ -1.24
VRK2-206ENST00000435505 IFRD2Q12894 506 aaPredicted RBP7.31□□□□□ -1.24
VRK2-206ENST00000435505 NUDT16Q96DE0 195 aaKnown RBP7.31□□□□□ -1.24
VRK2-206ENST00000435505 NGLY1Q96IV0 654 aa7.31□□□□□ -1.24
VRK2-206ENST00000435505 FOXD3Q9UJU5 478 aaPredicted RBP7.31□□□□□ -1.24
VRK2-206ENST00000435505 MRPS23Q9Y3D9 190 aaKnown RBP7.31□□□□□ -1.24
VRK2-206ENST00000435505 DAAM1Q9Y4D1 1078 aa7.31□□□□□ -1.24
VRK2-206ENST00000435505 ARHGAP31Q2M1Z3 1444 aa7.31□□□□□ -1.24
VRK2-206ENST00000435505 MAP3K10Q02779 954 aa7.3□□□□□ -1.24
VRK2-206ENST00000435505 SIM2Q14190 667 aaPredicted RBP7.3□□□□□ -1.24
VRK2-206ENST00000435505 C17orf53Q8N3J3 647 aaPredicted RBP7.3□□□□□ -1.24
VRK2-206ENST00000435505 SVIPQ8NHG7 77 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms