RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 TDRD7Q8NHU6 1098 aaKnown RBP27.73■■■□□ 2.03
SEMA3B-205ENST00000434030 BCAR3O75815 825 aa27.72■■■□□ 2.03
SEMA3B-205ENST00000434030 PDE8BO95263 885 aa27.72■■■□□ 2.03
SEMA3B-205ENST00000434030 FKBP1AP62942 108 aaKnown RBP27.72■■■□□ 2.03
SEMA3B-205ENST00000434030 AIDAQ96BJ3 306 aa27.72■■■□□ 2.03
SEMA3B-205ENST00000434030 JAG2Q9Y219 1238 aa27.72■■■□□ 2.03
SEMA3B-205ENST00000434030 AOC2O75106 756 aa27.71■■■□□ 2.03
SEMA3B-205ENST00000434030 PTPN12Q05209 780 aaKnown RBP27.71■■■□□ 2.03
SEMA3B-205ENST00000434030 INTS3Q68E01 1043 aaKnown RBP27.71■■■□□ 2.03
SEMA3B-205ENST00000434030 ZBED3Q96IU2 234 aaPredicted RBP27.71■■■□□ 2.03
SEMA3B-205ENST00000434030 FAM205AQ6ZU69 1335 aa27.7■■■□□ 2.03
SEMA3B-205ENST00000434030 ARAP2Q8WZ64 1704 aa27.7■■■□□ 2.03
SEMA3B-205ENST00000434030 MAP2K2P36507 400 aa27.7■■■□□ 2.02
SEMA3B-205ENST00000434030 MEIS3Q99687 375 aa27.7■■■□□ 2.02
SEMA3B-205ENST00000434030 IPO8O15397 1037 aaKnown RBP27.69■■■□□ 2.02
SEMA3B-205ENST00000434030 FBXO33Q7Z6M2 555 aa27.69■■■□□ 2.02
SEMA3B-205ENST00000434030 HDAC5Q9UQL6 1122 aa27.69■■■□□ 2.02
SEMA3B-205ENST00000434030 LRRFIP2Q9Y608 721 aaKnown RBP27.69■■■□□ 2.02
SEMA3B-205ENST00000434030 MYH13Q9UKX3 1938 aa27.69■■■□□ 2.02
SEMA3B-205ENST00000434030 F8W031 263 aaPredicted RBP27.68■■■□□ 2.02
SEMA3B-205ENST00000434030 EYA2O00167 538 aa27.68■■■□□ 2.02
SEMA3B-205ENST00000434030 TRIM27P14373 513 aa27.67■■■□□ 2.02
SEMA3B-205ENST00000434030 CTCFP49711 727 aaPredicted RBP27.67■■■□□ 2.02
SEMA3B-205ENST00000434030 DLGAP5Q15398 846 aa27.67■■■□□ 2.02
SEMA3B-205ENST00000434030 MTMR14Q8NCE2 650 aa27.67■■■□□ 2.02
SEMA3B-205ENST00000434030 FRAT1Q92837 279 aaPredicted RBP27.67■■■□□ 2.02
SEMA3B-205ENST00000434030 PRAMEF18Q5VWM3 479 aa27.66■■■□□ 2.02
SEMA3B-205ENST00000434030 RGMBQ6NW40 437 aa27.66■■■□□ 2.02
SEMA3B-205ENST00000434030 ATF7IPQ6VMQ6 1270 aa27.66■■■□□ 2.02
SEMA3B-205ENST00000434030 ATG9AQ7Z3C6 839 aa27.66■■■□□ 2.02
SEMA3B-205ENST00000434030 VPS37DQ86XT2 251 aa27.66■■■□□ 2.02
SEMA3B-205ENST00000434030 TNNQ9UQP3 1299 aa27.66■■■□□ 2.02
SEMA3B-205ENST00000434030 PAPPA2Q9BXP8 1791 aa27.65■■■□□ 2.02
SEMA3B-205ENST00000434030 FGFR2P21802 821 aa27.65■■■□□ 2.02
SEMA3B-205ENST00000434030 CAVIN4Q5BKX8 364 aa27.65■■■□□ 2.02
SEMA3B-205ENST00000434030 MFSD14BQ5SR56 506 aa27.65■■■□□ 2.02
SEMA3B-205ENST00000434030 PCDHAC2Q9Y5I4 1007 aa27.65■■■□□ 2.02
SEMA3B-205ENST00000434030 PUM3Q15397 648 aaKnown RBP27.64■■■□□ 2.02
SEMA3B-205ENST00000434030 CFAP100Q494V2 611 aa27.64■■■□□ 2.02
SEMA3B-205ENST00000434030 FBXO3Q9UK99 471 aa27.64■■■□□ 2.02
SEMA3B-205ENST00000434030 IQSEC3Q9UPP2 1182 aaPredicted RBP27.64■■■□□ 2.02
SEMA3B-205ENST00000434030 GNAI3P08754 354 aa27.63■■■□□ 2.01
SEMA3B-205ENST00000434030 APOBEC3FQ8IUX4 373 aaKnown RBP27.63■■■□□ 2.01
SEMA3B-205ENST00000434030 SIL1Q9H173 461 aa27.63■■■□□ 2.01
SEMA3B-205ENST00000434030 PRDM10Q9NQV6 1147 aa27.63■■■□□ 2.01
SEMA3B-205ENST00000434030 FAM155AB1AL88 458 aaPredicted RBP27.62■■■□□ 2.01
SEMA3B-205ENST00000434030 CIAO1O76071 339 aa27.62■■■□□ 2.01
SEMA3B-205ENST00000434030 IFIT1P09914 478 aaKnown RBP27.62■■■□□ 2.01
SEMA3B-205ENST00000434030 BCAMP50895 628 aa27.62■■■□□ 2.01
SEMA3B-205ENST00000434030 ZNF157P51786 506 aaPredicted RBP27.62■■■□□ 2.01
SEMA3B-205ENST00000434030 LBX1P52954 281 aa27.62■■■□□ 2.01
SEMA3B-205ENST00000434030 FKBP1BP68106 108 aa27.62■■■□□ 2.01
SEMA3B-205ENST00000434030 NOGQ13253 232 aa27.62■■■□□ 2.01
SEMA3B-205ENST00000434030 PRMT6Q96LA8 375 aaPredicted RBP27.62■■■□□ 2.01
SEMA3B-205ENST00000434030 ZIC5Q96T25 663 aa27.62■■■□□ 2.01
SEMA3B-205ENST00000434030 BEGAINQ9BUH8 593 aa27.62■■■□□ 2.01
SEMA3B-205ENST00000434030 ZBED9Q6R2W3 1325 aa27.62■■■□□ 2.01
SEMA3B-205ENST00000434030 HSPA8P11142 646 aaKnown RBP27.61■■■□□ 2.01
SEMA3B-205ENST00000434030 CCDC102AQ96A19 550 aa27.61■■■□□ 2.01
SEMA3B-205ENST00000434030 CLUAP1Q96AJ1 413 aa27.61■■■□□ 2.01
SEMA3B-205ENST00000434030 AKAP11Q9UKA4 1901 aa27.61■■■□□ 2.01
SEMA3B-205ENST00000434030 SPDYE2BA6NHP3 402 aa27.6■■■□□ 2.01
SEMA3B-205ENST00000434030 FRAT2O75474 233 aaPredicted RBP27.6■■■□□ 2.01
SEMA3B-205ENST00000434030 SPDYE6P0CI01 402 aa27.6■■■□□ 2.01
SEMA3B-205ENST00000434030 TNS4Q8IZW8 715 aa27.6■■■□□ 2.01
SEMA3B-205ENST00000434030 LPIN2Q92539 896 aa27.6■■■□□ 2.01
SEMA3B-205ENST00000434030 TTF2Q9UNY4 1162 aaKnown RBP27.6■■■□□ 2.01
SEMA3B-205ENST00000434030 PA2G4Q9UQ80 394 aaKnown RBP27.6■■■□□ 2.01
SEMA3B-205ENST00000434030 SLC5A1P13866 664 aa27.59■■■□□ 2.01
SEMA3B-205ENST00000434030 RBM5P52756 815 aaKnown RBP eCLIP27.59■■■□□ 2.016e-12■■■□□ 16.5
SEMA3B-205ENST00000434030 CHAF1AQ13111 956 aaPredicted RBP27.59■■■□□ 2.01
SEMA3B-205ENST00000434030 ZKSCAN2Q63HK3 967 aa27.59■■■□□ 2.01
SEMA3B-205ENST00000434030 MOB2Q70IA6 237 aa27.59■■■□□ 2.01
SEMA3B-205ENST00000434030 COPRSQ9NQ92 184 aa27.59■■■□□ 2.01
SEMA3B-205ENST00000434030 MYO1BO43795 1136 aa27.58■■■□□ 2.01
SEMA3B-205ENST00000434030 CEP126Q9P2H0 1117 aa27.58■■■□□ 2.01
SEMA3B-205ENST00000434030 NF2P35240 595 aa27.57■■■□□ 2
SEMA3B-205ENST00000434030 IL15P40933 162 aaPredicted RBP27.57■■■□□ 2
SEMA3B-205ENST00000434030 GRIK5Q16478 980 aa27.57■■■□□ 2
SEMA3B-205ENST00000434030 TBC1D22AQ8WUA7 517 aa27.57■■■□□ 2
SEMA3B-205ENST00000434030 DEFB129Q9H1M3 183 aa27.57■■■□□ 2
SEMA3B-205ENST00000434030 SERPINA10Q9UK55 444 aa27.57■■■□□ 2
SEMA3B-205ENST00000434030 AOX1Q06278 1338 aa27.57■■■□□ 2
SEMA3B-205ENST00000434030 COL1A1P02452 1464 aaPredicted RBP27.57■■■□□ 2
SEMA3B-205ENST00000434030 CLRN2A0PK11 232 aa27.56■■■□□ 2
SEMA3B-205ENST00000434030 UBE2Q2LH0YL09 131 aa27.56■■■□□ 2
SEMA3B-205ENST00000434030 SLC10A3P09131 477 aa27.56■■■□□ 2
SEMA3B-205ENST00000434030 MTX1Q13505 466 aa27.56■■■□□ 2
SEMA3B-205ENST00000434030 SRGAP3O43295 1099 aa27.55■■■□□ 2
SEMA3B-205ENST00000434030 TTLL12Q14166 644 aaPredicted RBP27.55■■■□□ 2
SEMA3B-205ENST00000434030 TMEM57Q8N5G2 664 aa27.55■■■□□ 2
SEMA3B-205ENST00000434030 ATP2B3Q16720 1220 aa27.54■■■□□ 2
SEMA3B-205ENST00000434030 CASP8AP2Q9UKL3 1982 aa27.54■■■□□ 2
SEMA3B-205ENST00000434030 GNAI2P04899 355 aa27.53■■■□□ 2
SEMA3B-205ENST00000434030 CRKP46108 304 aa27.53■■■□□ 2
SEMA3B-205ENST00000434030 KIF23Q02241 960 aaPredicted RBP27.53■■■□□ 2
SEMA3B-205ENST00000434030 RASAL3Q86YV0 1011 aa27.53■■■□□ 2
SEMA3B-205ENST00000434030 VEZTQ9HBM0 779 aa27.53■■■□□ 2
SEMA3B-205ENST00000434030 TSKSQ9UJT2 592 aa27.53■■■□□ 2
SEMA3B-205ENST00000434030 CA12O43570 354 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms