RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 UBE4AQ14139 1066 aa18.76■□□□□ 0.59
RPUSD3-208ENST00000433972 PRAMEF18Q5VWM3 479 aa18.76■□□□□ 0.59
RPUSD3-208ENST00000433972 SCAF8Q9UPN6 1271 aaKnown RBP18.76■□□□□ 0.59
RPUSD3-208ENST00000433972 PPP1R12BO60237 982 aaPredicted RBP18.75■□□□□ 0.59
RPUSD3-208ENST00000433972 PLIN1O60240 522 aa18.75■□□□□ 0.59
RPUSD3-208ENST00000433972 MOB2Q70IA6 237 aa18.75■□□□□ 0.59
RPUSD3-208ENST00000433972 DEFB129Q9H1M3 183 aa18.75■□□□□ 0.59
RPUSD3-208ENST00000433972 PTPRCP08575 1304 aa18.74■□□□□ 0.59
RPUSD3-208ENST00000433972 UNCXA6NJT0 531 aa18.74■□□□□ 0.59
RPUSD3-208ENST00000433972 E9PSI1 815 aa18.74■□□□□ 0.59
RPUSD3-208ENST00000433972 TM4SF4P48230 202 aa18.74■□□□□ 0.59
RPUSD3-208ENST00000433972 SUPT20HL1Q3ZLR7 823 aa18.74■□□□□ 0.59
RPUSD3-208ENST00000433972 EPHA10Q5JZY3 1008 aa18.74■□□□□ 0.59
RPUSD3-208ENST00000433972 CTU1Q7Z7A3 348 aaKnown RBP18.74■□□□□ 0.59
RPUSD3-208ENST00000433972 MROH5Q6ZUA9 1318 aa18.74■□□□□ 0.59
RPUSD3-208ENST00000433972 SPDYE2BA6NHP3 402 aa18.73■□□□□ 0.59
RPUSD3-208ENST00000433972 SNAP23O00161 211 aa18.73■□□□□ 0.59
RPUSD3-208ENST00000433972 SPDYE6P0CI01 402 aa18.73■□□□□ 0.59
RPUSD3-208ENST00000433972 TNFAIP1Q13829 316 aa18.73■□□□□ 0.59
RPUSD3-208ENST00000433972 PKN2Q16513 984 aaKnown RBP18.73■□□□□ 0.59
RPUSD3-208ENST00000433972 CFAP100Q494V2 611 aa18.73■□□□□ 0.59
RPUSD3-208ENST00000433972 NOM1Q5C9Z4 860 aaKnown RBP18.73■□□□□ 0.59
RPUSD3-208ENST00000433972 CERS5Q8N5B7 392 aa18.73■□□□□ 0.59
RPUSD3-208ENST00000433972 ZNF594Q96JF6 807 aaPredicted RBP18.73■□□□□ 0.59
RPUSD3-208ENST00000433972 ANGEL1Q9UNK9 670 aaKnown RBP18.73■□□□□ 0.59
RPUSD3-208ENST00000433972 UTYO14607 1347 aa18.73■□□□□ 0.59
RPUSD3-208ENST00000433972 ZNF521Q96K83 1311 aa18.73■□□□□ 0.59
RPUSD3-208ENST00000433972 F8W031 263 aaPredicted RBP18.72■□□□□ 0.59
RPUSD3-208ENST00000433972 ALDH1A1P00352 501 aa18.72■□□□□ 0.59
RPUSD3-208ENST00000433972 HIBADHP31937 336 aaKnown RBP18.72■□□□□ 0.59
RPUSD3-208ENST00000433972 RBM5P52756 815 aaKnown RBP eCLIP18.72■□□□□ 0.59
RPUSD3-208ENST00000433972 INHBEP58166 350 aa18.72■□□□□ 0.59
RPUSD3-208ENST00000433972 VPS37DQ86XT2 251 aa18.72■□□□□ 0.59
RPUSD3-208ENST00000433972 ZNF646O15015 1829 aaPredicted RBP18.72■□□□□ 0.59
RPUSD3-208ENST00000433972 FAM205AQ6ZU69 1335 aa18.72■□□□□ 0.59
RPUSD3-208ENST00000433972 PTPN12Q05209 780 aaKnown RBP18.71■□□□□ 0.59
RPUSD3-208ENST00000433972 PRKG1Q13976 671 aa18.71■□□□□ 0.59
RPUSD3-208ENST00000433972 MAP3K11Q16584 847 aa18.71■□□□□ 0.59
RPUSD3-208ENST00000433972 LDLRAD1Q5T700 205 aa18.71■□□□□ 0.59
RPUSD3-208ENST00000433972 SUCLG2Q96I99 432 aa18.71■□□□□ 0.59
RPUSD3-208ENST00000433972 ZBTB48P10074 688 aaPredicted RBP18.7■□□□□ 0.58
RPUSD3-208ENST00000433972 CAVIN4Q5BKX8 364 aa18.7■□□□□ 0.58
RPUSD3-208ENST00000433972 MFSD14BQ5SR56 506 aa18.7■□□□□ 0.58
RPUSD3-208ENST00000433972 TDRD7Q8NHU6 1098 aaKnown RBP18.7■□□□□ 0.58
RPUSD3-208ENST00000433972 SLC10A4Q96EP9 437 aa18.7■□□□□ 0.58
RPUSD3-208ENST00000433972 CFHR5Q9BXR6 569 aa18.7■□□□□ 0.58
RPUSD3-208ENST00000433972 VEZTQ9HBM0 779 aa18.7■□□□□ 0.58
RPUSD3-208ENST00000433972 SERPINA10Q9UK55 444 aa18.7■□□□□ 0.58
RPUSD3-208ENST00000433972 CASP8AP2Q9UKL3 1982 aa18.7■□□□□ 0.58
RPUSD3-208ENST00000433972 AKAP11Q9UKA4 1901 aa18.69■□□□□ 0.58
RPUSD3-208ENST00000433972 MANSC4A6NHS7 340 aaPredicted RBP18.69■□□□□ 0.58
RPUSD3-208ENST00000433972 NBPF7P0C2Y1 421 aaPredicted RBP18.69■□□□□ 0.58
RPUSD3-208ENST00000433972 IREB2P48200 963 aaKnown RBP18.69■□□□□ 0.58
RPUSD3-208ENST00000433972 RABL6Q3YEC7 729 aaPredicted RBP18.69■□□□□ 0.58
RPUSD3-208ENST00000433972 SPRYD7Q5W111 196 aa18.69■□□□□ 0.58
RPUSD3-208ENST00000433972 CLRN2A0PK11 232 aa18.68■□□□□ 0.58
RPUSD3-208ENST00000433972 FRAT2O75474 233 aaPredicted RBP18.68■□□□□ 0.58
RPUSD3-208ENST00000433972 MKRN3Q13064 507 aaKnown RBP18.68■□□□□ 0.58
RPUSD3-208ENST00000433972 METTL24Q5JXM2 366 aa18.68■□□□□ 0.58
RPUSD3-208ENST00000433972 MRPL50Q8N5N7 158 aaKnown RBP18.68■□□□□ 0.58
RPUSD3-208ENST00000433972 TBC1D22AQ8WUA7 517 aa18.68■□□□□ 0.58
RPUSD3-208ENST00000433972 PRMT6Q96LA8 375 aaPredicted RBP18.68■□□□□ 0.58
RPUSD3-208ENST00000433972 BICC1Q9H694 974 aaKnown RBP18.68■□□□□ 0.58
RPUSD3-208ENST00000433972 TTF2Q9UNY4 1162 aaKnown RBP18.68■□□□□ 0.58
RPUSD3-208ENST00000433972 RIPOR2Q9Y4F9 1068 aa18.68■□□□□ 0.58
RPUSD3-208ENST00000433972 TBC1D8O95759 1140 aa18.67■□□□□ 0.58
RPUSD3-208ENST00000433972 GYG1P46976 350 aa18.67■□□□□ 0.58
RPUSD3-208ENST00000433972 ZNF296Q8WUU4 475 aaPredicted RBP18.67■□□□□ 0.58
RPUSD3-208ENST00000433972 KAZALD1Q96I82 304 aa18.67■□□□□ 0.58
RPUSD3-208ENST00000433972 FAM84BQ96KN1 310 aaPredicted RBP18.67■□□□□ 0.58
RPUSD3-208ENST00000433972 JAG2Q9Y219 1238 aa18.67■□□□□ 0.58
RPUSD3-208ENST00000433972 GPR25O00155 361 aa18.66■□□□□ 0.58
RPUSD3-208ENST00000433972 TNNI2P48788 182 aa18.66■□□□□ 0.58
RPUSD3-208ENST00000433972 RASA3Q14644 834 aa18.66■□□□□ 0.58
RPUSD3-208ENST00000433972 ALDH1L2Q3SY69 923 aa18.66■□□□□ 0.58
RPUSD3-208ENST00000433972 OTUD7BQ6GQQ9 843 aa18.66■□□□□ 0.58
RPUSD3-208ENST00000433972 SPDYE2Q495Y8 402 aa18.65■□□□□ 0.58
RPUSD3-208ENST00000433972 ANKRD13AQ8IZ07 590 aa18.65■□□□□ 0.58
RPUSD3-208ENST00000433972 PUS3Q9BZE2 481 aaKnown RBP18.65■□□□□ 0.58
RPUSD3-208ENST00000433972 KIF16BQ96L93 1317 aa18.65■□□□□ 0.58
RPUSD3-208ENST00000433972 A0A1B0GUL6 1792 aa18.65■□□□□ 0.58
RPUSD3-208ENST00000433972 FKTNO75072 461 aa18.64■□□□□ 0.57
RPUSD3-208ENST00000433972 PDE8BO95263 885 aa18.64■□□□□ 0.57
RPUSD3-208ENST00000433972 HDLBPQ00341 1268 aaKnown RBP18.64■□□□□ 0.57
RPUSD3-208ENST00000433972 SSH1Q8WYL5 1049 aa18.64■□□□□ 0.57
RPUSD3-208ENST00000433972 WNK4Q96J92 1243 aa18.64■□□□□ 0.57
RPUSD3-208ENST00000433972 HDAC5Q9UQL6 1122 aa18.64■□□□□ 0.57
RPUSD3-208ENST00000433972 MAST3O60307 1309 aa18.64■□□□□ 0.57
RPUSD3-208ENST00000433972 IFIT1P09914 478 aaKnown RBP18.63■□□□□ 0.57
RPUSD3-208ENST00000433972 CT47B1P0C2W7 299 aaPredicted RBP18.63■□□□□ 0.57
RPUSD3-208ENST00000433972 CRKP46108 304 aa18.63■□□□□ 0.57
RPUSD3-208ENST00000433972 SLFN5Q08AF3 891 aa18.63■□□□□ 0.57
RPUSD3-208ENST00000433972 NBPF12Q5TAG4 269 aaPredicted RBP18.63■□□□□ 0.57
RPUSD3-208ENST00000433972 FBXO33Q7Z6M2 555 aa18.63■□□□□ 0.57
RPUSD3-208ENST00000433972 DZIP1LQ8IYY4 767 aaKnown RBP18.63■□□□□ 0.57
RPUSD3-208ENST00000433972 ZNF70Q9UC06 446 aaPredicted RBP18.63■□□□□ 0.57
RPUSD3-208ENST00000433972 SUGT1Q9Y2Z0 365 aa18.63■□□□□ 0.57
RPUSD3-208ENST00000433972 PCDHAC2Q9Y5I4 1007 aa18.63■□□□□ 0.57
RPUSD3-208ENST00000433972 PUM3Q15397 648 aaKnown RBP18.62■□□□□ 0.57
RPUSD3-208ENST00000433972 LRRC24Q50LG9 513 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms