RNA–Protein interactions for RNA: ENST00000430593.3

CSNK1A1P1-201, Transcript of casein kinase 1 alpha 1 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK1A1P1, Length 2,147 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P1-201ENST00000430593 RBM8AQ9Y5S9 174 aaKnown RBP16.05■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 STX10O60499 249 aa16.04■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 DTNBO60941 627 aa16.04■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 PRPF38AQ8NAV1 312 aaKnown RBP16.04■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 AFAP1L1Q8TED9 768 aa16.04■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 MRPS27Q92552 414 aaKnown RBP16.04■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 ZNF396Q96N95 335 aaPredicted RBP16.04■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 MAP4K4O95819 1239 aaPredicted RBP16.04■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 NLRP12P59046 1061 aa16.04■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 C11orf91Q3C1V1 193 aa16.04■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 TTLL5Q6EMB2 1281 aa16.04■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 FSIP1Q8NA03 581 aa16.04■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 GNL3LQ9NVN8 582 aaKnown RBP16.04■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 SBNO1A3KN83 1393 aa16.03■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 TNRQ92752 1358 aa16.03■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 SLC27A2O14975 620 aa16.03■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 PRPF6O94906 941 aaKnown RBP16.03■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 ERCC4Q92889 916 aaPredicted RBP16.03■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 PNKPQ96T60 521 aa16.03■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 LLPHQ9BRT6 129 aaKnown RBP16.03■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 ABCB6Q9NP58 842 aa16.03■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 HMG20BQ9P0W2 317 aa16.03■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 EDC4Q6P2E9 1401 aaKnown RBP16.03■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 SPATA31D1Q6ZQQ2 1576 aa16.03■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 RGPD1P0DJD0 1748 aa16.03■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 H3BQV1 296 aa16.03■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 HIP1O00291 1037 aa16.03■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 SETQ01105 290 aaPredicted RBP16.03■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 PLEKHO1Q53GL0 409 aaPredicted RBP16.03■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 IFFO2Q5TF58 517 aa16.03■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 LRCH2Q5VUJ6 765 aa16.03■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 HSD3B7Q9H2F3 369 aa16.03■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 EMILIN1Q9Y6C2 1016 aa16.03■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 SF3B2Q13435 895 aaKnown RBP16.02■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 HSP90AB4PQ58FF6 505 aa16.02■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 SMARCC2Q8TAQ2 1214 aa16.02■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 CDC23Q9UJX2 597 aa16.02■□□□□ 0.16
CSNK1A1P1-201ENST00000430593 CEP170BQ9Y4F5 1589 aaPredicted RBP16.02■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 A0A087WWV3 80 aa16.01■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 ANKRD65E5RJM6 399 aa16.01■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 ERCC3P19447 782 aa16.01■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 GPTP24298 496 aa16.01■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 TBX2Q13207 712 aaPredicted RBP16.01■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 NEDD9Q14511 834 aa16.01■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 WDR93Q6P2C0 686 aa16.01■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 CCDC102AQ96A19 550 aa16.01■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 TMCO5BA8MYB1 307 aa16.01■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 RNF40O75150 1001 aa16.01■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 WDHD1O75717 1129 aaPredicted RBP16.01■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 CHGAP10645 457 aaKnown RBP16.01■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 ADALQ6DHV7 355 aa16.01■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 GBP6Q6ZN66 633 aa16.01■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 JMYQ8N9B5 988 aa16.01■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 LRRC37A3O60309 1634 aa16.01■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 MAP9Q49MG5 647 aa16■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 BAG1Q99933 345 aaPredicted RBP16■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 SDF4Q9BRK5 362 aa16■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 FAM169AQ9Y6X4 670 aa16■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 ZNF142P52746 1687 aaPredicted RBP16■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 EBAG9O00559 213 aa16■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 TOP1P11387 765 aaKnown RBP16■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 LIG3P49916 1009 aa16■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 UBASH3AP57075 661 aa16■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 CCDC12Q8WUD4 166 aaPredicted RBP16■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 EVI5LQ96CN4 794 aa16■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 XAGE2Q96GT9 111 aa16■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 CABS1Q96KC9 395 aa16■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 MCM8Q9UJA3 840 aa16■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 JAK2O60674 1132 aa15.99■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 UBTFL1P0CB47 393 aaPredicted RBP15.99■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 FLIIQ13045 1269 aa15.99■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 IDI1Q13907 227 aa15.99■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 AMOTL1Q8IY63 956 aa15.99■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 MIEF2Q96C03 454 aa15.99■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 USP28Q96RU2 1077 aa15.99■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 USP44Q9H0E7 712 aa15.99■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 MON2Q7Z3U7 1717 aa15.99■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 CDHR2Q9BYE9 1310 aa15.99■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 MED23Q9ULK4 1368 aa15.98■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 SURF6O75683 361 aaKnown RBP15.98■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 SYF2O95926 243 aaKnown RBP15.98■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 ELF1P32519 619 aa15.98■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 MAP2K1Q02750 393 aaPredicted RBP15.98■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 GIMAP7Q8NHV1 300 aa15.98■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 STK31Q9BXU1 1019 aa15.98■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 ME1P48163 572 aa15.98■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 VSNL1P62760 191 aa15.98■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 MYL5Q02045 173 aa15.98■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 KRT32Q14532 448 aa15.98■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 KIF4BQ2VIQ3 1234 aa15.98■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 SAMD1Q6SPF0 538 aaPredicted RBP15.98■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 LRRIQ3A6PVS8 624 aaPredicted RBP15.97■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 FSBPO95073 299 aa15.97■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 LMOD1P29536 600 aaPredicted RBP15.97■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 INPP5BP32019 993 aa15.97■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 RTEL1Q9NZ71 1219 aa15.97■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 A2ML1A8K2U0 1454 aa15.97■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 PATL2C9JE40 543 aaKnown RBP15.97■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 SLC3A2P08195 630 aaKnown RBP15.97■□□□□ 0.15
CSNK1A1P1-201ENST00000430593 ATP1A3P13637 1013 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms