RNA–Protein interactions for RNA: ENST00000430591.1

SMC6-205, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-205ENST00000430591 C6orf229H3BNL8 230 aa8.37□□□□□ -1.07
SMC6-205ENST00000430591 TAF5LO75529 589 aa8.37□□□□□ -1.07
SMC6-205ENST00000430591 CXCL9Q07325 125 aa8.37□□□□□ -1.07
SMC6-205ENST00000430591 KIAA2012Q0VF49 1180 aa8.37□□□□□ -1.07
SMC6-205ENST00000430591 ANKRD18AQ8IVF6 992 aa8.37□□□□□ -1.07
SMC6-205ENST00000430591 DDX12PQ92771 950 aa8.37□□□□□ -1.07
SMC6-205ENST00000430591 MXD3Q9BW11 206 aa8.37□□□□□ -1.07
SMC6-205ENST00000430591 PLA2G12BQ9BX93 195 aa8.37□□□□□ -1.07
SMC6-205ENST00000430591 BICC1Q9H694 974 aaKnown RBP8.37□□□□□ -1.07
SMC6-205ENST00000430591 VPS9D1Q9Y2B5 631 aa8.37□□□□□ -1.07
SMC6-205ENST00000430591 CHMP3Q9Y3E7 222 aa8.37□□□□□ -1.07
SMC6-205ENST00000430591 PSME4Q14997 1843 aa8.37□□□□□ -1.07
SMC6-205ENST00000430591 SCN4AP35499 1836 aa8.36□□□□□ -1.07
SMC6-205ENST00000430591 ZBED9Q6R2W3 1325 aa8.36□□□□□ -1.07
SMC6-205ENST00000430591 UFL1O94874 794 aa8.36□□□□□ -1.07
SMC6-205ENST00000430591 EGFRP00533 1210 aa8.36□□□□□ -1.07
SMC6-205ENST00000430591 RLBP1P12271 317 aa8.36□□□□□ -1.07
SMC6-205ENST00000430591 SCNN1DP51172 638 aa8.36□□□□□ -1.07
SMC6-205ENST00000430591 ALDH1L2Q3SY69 923 aa8.36□□□□□ -1.07
SMC6-205ENST00000430591 CC2D2BQ6DHV5 1058 aa8.36□□□□□ -1.07
SMC6-205ENST00000430591 NIM1KQ8IY84 436 aa8.36□□□□□ -1.07
SMC6-205ENST00000430591 FRAT1Q92837 279 aaPredicted RBP8.36□□□□□ -1.07
SMC6-205ENST00000430591 MEIS3Q99687 375 aa8.36□□□□□ -1.07
SMC6-205ENST00000430591 ZBED2Q9BTP6 218 aa8.36□□□□□ -1.07
SMC6-205ENST00000430591 WDR70Q9NW82 654 aa8.36□□□□□ -1.07
SMC6-205ENST00000430591 C9orf78Q9NZ63 289 aaPredicted RBP8.36□□□□□ -1.07
SMC6-205ENST00000430591 ARIH1Q9Y4X5 557 aaPredicted RBP8.36□□□□□ -1.07
SMC6-205ENST00000430591 CEP350Q5VT06 3117 aa8.36□□□□□ -1.07
SMC6-205ENST00000430591 POLR2AP24928 1970 aaKnown RBP8.35□□□□□ -1.07
SMC6-205ENST00000430591 UTYO14607 1347 aa8.35□□□□□ -1.07
SMC6-205ENST00000430591 PTPRCP08575 1304 aa8.35□□□□□ -1.07
SMC6-205ENST00000430591 PSMD14O00487 310 aa8.35□□□□□ -1.07
SMC6-205ENST00000430591 PLIN1O60240 522 aa8.35□□□□□ -1.07
SMC6-205ENST00000430591 ECE2O60344 883 aa8.35□□□□□ -1.07
SMC6-205ENST00000430591 ALDH1L1O75891 902 aa8.35□□□□□ -1.07
SMC6-205ENST00000430591 TRIM27P14373 513 aa8.35□□□□□ -1.07
SMC6-205ENST00000430591 COL9A1P20849 921 aa8.35□□□□□ -1.07
SMC6-205ENST00000430591 GMPSP49915 693 aaPredicted RBP8.35□□□□□ -1.07
SMC6-205ENST00000430591 CHRNDQ07001 517 aa8.35□□□□□ -1.07
SMC6-205ENST00000430591 LRRC24Q50LG9 513 aa8.35□□□□□ -1.07
SMC6-205ENST00000430591 EAPPQ56P03 285 aaPredicted RBP8.35□□□□□ -1.07
SMC6-205ENST00000430591 TYW1BQ6NUM6 668 aa8.35□□□□□ -1.07
SMC6-205ENST00000430591 CHMP4AQ9BY43 222 aa8.35□□□□□ -1.07
SMC6-205ENST00000430591 TAF1DQ9H5J8 278 aaPredicted RBP8.35□□□□□ -1.07
SMC6-205ENST00000430591 ANKIB1Q9P2G1 1089 aa8.35□□□□□ -1.07
SMC6-205ENST00000430591 ASTN2O75129 1339 aaPredicted RBP8.34□□□□□ -1.07
SMC6-205ENST00000430591 ZC3H4Q9UPT8 1303 aaKnown RBP8.34□□□□□ -1.07
SMC6-205ENST00000430591 IRS2Q9Y4H2 1338 aa8.34□□□□□ -1.07
SMC6-205ENST00000430591 TOMM70O94826 608 aa8.34□□□□□ -1.07
SMC6-205ENST00000430591 VEGFAP15692 232 aaPredicted RBP8.34□□□□□ -1.07
SMC6-205ENST00000430591 RFX5P48382 616 aaPredicted RBP8.34□□□□□ -1.07
SMC6-205ENST00000430591 CCT4P50991 539 aaKnown RBP8.34□□□□□ -1.07
SMC6-205ENST00000430591 WASHC4Q2M389 1173 aa8.34□□□□□ -1.07
SMC6-205ENST00000430591 TRPM4Q8TD43 1214 aa8.34□□□□□ -1.07
SMC6-205ENST00000430591 JDP2Q8WYK2 163 aa8.34□□□□□ -1.07
SMC6-205ENST00000430591 YTHDC1Q96MU7 727 aaKnown RBP8.34□□□□□ -1.07
SMC6-205ENST00000430591 BSDC1Q9NW68 430 aaPredicted RBP8.34□□□□□ -1.07
SMC6-205ENST00000430591 PODXL2Q9NZ53 605 aa8.34□□□□□ -1.07
SMC6-205ENST00000430591 GGA1Q9UJY5 639 aa8.34□□□□□ -1.07
SMC6-205ENST00000430591 SCAF8Q9UPN6 1271 aaKnown RBP8.34□□□□□ -1.07
SMC6-205ENST00000430591 PA2G4Q9UQ80 394 aaKnown RBP8.34□□□□□ -1.07
SMC6-205ENST00000430591 JAG2Q9Y219 1238 aa8.34□□□□□ -1.07
SMC6-205ENST00000430591 LRRFIP2Q9Y608 721 aaKnown RBP8.34□□□□□ -1.07
SMC6-205ENST00000430591 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.34□□□□□ -1.07
SMC6-205ENST00000430591 ANKRD18BA2A2Z9 1011 aa8.33□□□□□ -1.08
SMC6-205ENST00000430591 EPHX2P34913 555 aa8.33□□□□□ -1.08
SMC6-205ENST00000430591 HIRAP54198 1017 aaPredicted RBP8.33□□□□□ -1.08
SMC6-205ENST00000430591 BRPF1P55201 1214 aaPredicted RBP8.33□□□□□ -1.08
SMC6-205ENST00000430591 EIF6P56537 245 aaKnown RBP8.33□□□□□ -1.08
SMC6-205ENST00000430591 PLCB2Q00722 1185 aa8.33□□□□□ -1.08
SMC6-205ENST00000430591 MAP1SQ66K74 1059 aaPredicted RBP8.33□□□□□ -1.08
SMC6-205ENST00000430591 CIAPIN1Q6FI81 312 aa8.33□□□□□ -1.08
SMC6-205ENST00000430591 TMEM57Q8N5G2 664 aa8.33□□□□□ -1.08
SMC6-205ENST00000430591 RBM46Q8TBY0 533 aaKnown RBP8.33□□□□□ -1.08
SMC6-205ENST00000430591 FBXW7Q969H0 707 aa8.33□□□□□ -1.08
SMC6-205ENST00000430591 CDC5LQ99459 802 aaKnown RBP8.33□□□□□ -1.08
SMC6-205ENST00000430591 SLC4A5Q9BY07 1137 aa8.33□□□□□ -1.08
SMC6-205ENST00000430591 C1orf115Q9H7X2 142 aa8.33□□□□□ -1.08
SMC6-205ENST00000430591 ZNRF3Q9ULT6 936 aa8.33□□□□□ -1.08
SMC6-205ENST00000430591 XDHP47989 1333 aa8.32□□□□□ -1.08
SMC6-205ENST00000430591 PPP1R3GB7ZBB8 358 aa8.32□□□□□ -1.08
SMC6-205ENST00000430591 BHMG1C9JSJ3 638 aaPredicted RBP8.32□□□□□ -1.08
SMC6-205ENST00000430591 TRAF5O00463 557 aa8.32□□□□□ -1.08
SMC6-205ENST00000430591 HSPA6P17066 643 aa8.32□□□□□ -1.08
SMC6-205ENST00000430591 IGHMBP2P38935 993 aaKnown RBP8.32□□□□□ -1.08
SMC6-205ENST00000430591 IFIT5Q13325 482 aaKnown RBP8.32□□□□□ -1.08
SMC6-205ENST00000430591 RABL6Q3YEC7 729 aaPredicted RBP8.32□□□□□ -1.08
SMC6-205ENST00000430591 SAMD7Q7Z3H4 446 aa8.32□□□□□ -1.08
SMC6-205ENST00000430591 TMC4Q7Z404 712 aa8.32□□□□□ -1.08
SMC6-205ENST00000430591 C16orf71Q8IYS4 520 aaPredicted RBP8.32□□□□□ -1.08
SMC6-205ENST00000430591 GPC2Q8N158 579 aa8.32□□□□□ -1.08
SMC6-205ENST00000430591 SUPT20HQ8NEM7 779 aa8.32□□□□□ -1.08
SMC6-205ENST00000430591 PANK1Q8TE04 598 aa8.32□□□□□ -1.08
SMC6-205ENST00000430591 HACL1Q9UJ83 578 aa8.32□□□□□ -1.08
SMC6-205ENST00000430591 PCDHAC2Q9Y5I4 1007 aa8.32□□□□□ -1.08
SMC6-205ENST00000430591 AOX1Q06278 1338 aa8.31□□□□□ -1.08
SMC6-205ENST00000430591 CT47B1P0C2W7 299 aaPredicted RBP8.31□□□□□ -1.08
SMC6-205ENST00000430591 ATP2B4P23634 1241 aa8.31□□□□□ -1.08
SMC6-205ENST00000430591 NBR1Q14596 966 aa8.31□□□□□ -1.08
SMC6-205ENST00000430591 PROX2Q3B8N5 592 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms