RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 BCAMP50895 628 aa13.01□□□□□ -0.33
ATG4B-211ENST00000429899 KIF22Q14807 665 aa13.01□□□□□ -0.33
ATG4B-211ENST00000429899 CCDC146Q8IYE0 955 aa13.01□□□□□ -0.33
ATG4B-211ENST00000429899 MS4A4AQ96JQ5 239 aa13.01□□□□□ -0.33
ATG4B-211ENST00000429899 ISCA1Q9BUE6 129 aa13.01□□□□□ -0.33
ATG4B-211ENST00000429899 MUC3AQ02505 3323 aa13□□□□□ -0.33
ATG4B-211ENST00000429899 A0A1B0GUL6 1792 aa13□□□□□ -0.33
ATG4B-211ENST00000429899 ARAP2Q8WZ64 1704 aa13□□□□□ -0.33
ATG4B-211ENST00000429899 RPTORQ8N122 1335 aa13□□□□□ -0.33
ATG4B-211ENST00000429899 ZNF521Q96K83 1311 aa13□□□□□ -0.33
ATG4B-211ENST00000429899 GJB1P08034 283 aa13□□□□□ -0.33
ATG4B-211ENST00000429899 RUNDC1Q96C34 613 aa13□□□□□ -0.33
ATG4B-211ENST00000429899 RNF208Q9H0X6 261 aa13□□□□□ -0.33
ATG4B-211ENST00000429899 PCDHAC2Q9Y5I4 1007 aa13□□□□□ -0.33
ATG4B-211ENST00000429899 DOCK3Q8IZD9 2030 aa13□□□□□ -0.33
ATG4B-211ENST00000429899 XDHP47989 1333 aa12.99□□□□□ -0.33
ATG4B-211ENST00000429899 IRS4O14654 1257 aaPredicted RBP12.99□□□□□ -0.33
ATG4B-211ENST00000429899 USP2O75604 605 aaPredicted RBP12.99□□□□□ -0.33
ATG4B-211ENST00000429899 NBPF12Q5TAG4 269 aaPredicted RBP12.99□□□□□ -0.33
ATG4B-211ENST00000429899 KIAA0825Q8IV33 1275 aa12.99□□□□□ -0.33
ATG4B-211ENST00000429899 CNKSR2Q8WXI2 1034 aa12.99□□□□□ -0.33
ATG4B-211ENST00000429899 BRI3BPQ8WY22 251 aa12.99□□□□□ -0.33
ATG4B-211ENST00000429899 GDF15Q99988 308 aa12.99□□□□□ -0.33
ATG4B-211ENST00000429899 ELP3Q9H9T3 547 aa12.99□□□□□ -0.33
ATG4B-211ENST00000429899 MYO3BQ8WXR4 1341 aa12.98□□□□□ -0.33
ATG4B-211ENST00000429899 BMP8BP34820 402 aa12.98□□□□□ -0.33
ATG4B-211ENST00000429899 LACTBP83111 547 aaPredicted RBP12.98□□□□□ -0.33
ATG4B-211ENST00000429899 LRIT3Q3SXY7 679 aa12.98□□□□□ -0.33
ATG4B-211ENST00000429899 STRIP1Q5VSL9 837 aa12.98□□□□□ -0.33
ATG4B-211ENST00000429899 FAM43AQ8N2R8 423 aa12.98□□□□□ -0.33
ATG4B-211ENST00000429899 U2AF1L4Q8WU68 220 aaKnown RBP12.98□□□□□ -0.33
ATG4B-211ENST00000429899 OPTNQ96CV9 577 aa12.98□□□□□ -0.33
ATG4B-211ENST00000429899 BIN2Q9UBW5 565 aaPredicted RBP12.98□□□□□ -0.33
ATG4B-211ENST00000429899 TSPYL4Q9UJ04 414 aa12.98□□□□□ -0.33
ATG4B-211ENST00000429899 MED23Q9ULK4 1368 aa12.97□□□□□ -0.33
ATG4B-211ENST00000429899 AOX1Q06278 1338 aa12.97□□□□□ -0.33
ATG4B-211ENST00000429899 IRS2Q9Y4H2 1338 aa12.97□□□□□ -0.33
ATG4B-211ENST00000429899 CCL15-CCL14A0A0B4J2E2 113 aa12.97□□□□□ -0.33
ATG4B-211ENST00000429899 UNCXA6NJT0 531 aa12.97□□□□□ -0.33
ATG4B-211ENST00000429899 ATP2B4P23634 1241 aa12.97□□□□□ -0.33
ATG4B-211ENST00000429899 CTGFP29279 349 aa12.97□□□□□ -0.33
ATG4B-211ENST00000429899 GRK4P32298 578 aa12.97□□□□□ -0.33
ATG4B-211ENST00000429899 IREB2P48200 963 aaKnown RBP12.97□□□□□ -0.33
ATG4B-211ENST00000429899 PRMT2P55345 433 aa12.97□□□□□ -0.33
ATG4B-211ENST00000429899 CCL15Q16663 113 aa12.97□□□□□ -0.33
ATG4B-211ENST00000429899 NCBP3Q53F19 620 aaKnown RBP12.97□□□□□ -0.33
ATG4B-211ENST00000429899 TXNRD3Q86VQ6 643 aa12.97□□□□□ -0.33
ATG4B-211ENST00000429899 CCDC85AQ96PX6 553 aaPredicted RBP12.97□□□□□ -0.33
ATG4B-211ENST00000429899 ZMYND8Q9ULU4 1186 aaPredicted RBP12.97□□□□□ -0.33
ATG4B-211ENST00000429899 APAF1O14727 1248 aa12.96□□□□□ -0.33
ATG4B-211ENST00000429899 CENPBP07199 599 aaPredicted RBP12.96□□□□□ -0.33
ATG4B-211ENST00000429899 PLA2G5P39877 138 aa12.96□□□□□ -0.33
ATG4B-211ENST00000429899 ANKRD13AQ8IZ07 590 aa12.96□□□□□ -0.33
ATG4B-211ENST00000429899 PLBD2Q8NHP8 589 aa12.96□□□□□ -0.33
ATG4B-211ENST00000429899 RAET1EQ8TD07 263 aa12.96□□□□□ -0.33
ATG4B-211ENST00000429899 FAM122AQ96E09 287 aa12.96□□□□□ -0.33
ATG4B-211ENST00000429899 FAM161BQ96MY7 647 aa12.96□□□□□ -0.33
ATG4B-211ENST00000429899 GUCD1Q96NT3 240 aa12.96□□□□□ -0.33
ATG4B-211ENST00000429899 MAPK8IP3Q9UPT6 1336 aa12.95□□□□□ -0.34
ATG4B-211ENST00000429899 GNRH1P01148 92 aa12.95□□□□□ -0.34
ATG4B-211ENST00000429899 KRT24Q2M2I5 525 aa12.95□□□□□ -0.34
ATG4B-211ENST00000429899 C7orf61Q8IZ16 206 aa12.95□□□□□ -0.34
ATG4B-211ENST00000429899 TDHQ8IZJ6 230 aa12.95□□□□□ -0.34
ATG4B-211ENST00000429899 CHPF2Q9P2E5 772 aa12.95□□□□□ -0.34
ATG4B-211ENST00000429899 RIPOR2Q9Y4F9 1068 aa12.95□□□□□ -0.34
ATG4B-211ENST00000429899 CDH23Q9H251 3354 aa12.95□□□□□ -0.34
ATG4B-211ENST00000429899 ZNF804BA4D1E1 1349 aa12.94□□□□□ -0.34
ATG4B-211ENST00000429899 CLRN2A0PK11 232 aa12.94□□□□□ -0.34
ATG4B-211ENST00000429899 TLR2O60603 784 aa12.94□□□□□ -0.34
ATG4B-211ENST00000429899 WDHD1O75717 1129 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-211ENST00000429899 SGPL1O95470 568 aa12.94□□□□□ -0.34
ATG4B-211ENST00000429899 UBXN2AP68543 259 aa12.94□□□□□ -0.34
ATG4B-211ENST00000429899 NFE2L2Q16236 605 aa12.94□□□□□ -0.34
ATG4B-211ENST00000429899 SUPT20HL1Q3ZLR7 823 aa12.94□□□□□ -0.34
ATG4B-211ENST00000429899 TTLL5Q6EMB2 1281 aa12.94□□□□□ -0.34
ATG4B-211ENST00000429899 JARID2Q92833 1246 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-211ENST00000429899 TRIM47Q96LD4 638 aa12.94□□□□□ -0.34
ATG4B-211ENST00000429899 UNC93B1Q9H1C4 597 aa12.94□□□□□ -0.34
ATG4B-211ENST00000429899 PNNQ9H307 717 aaKnown RBP12.94□□□□□ -0.34
ATG4B-211ENST00000429899 SRRDQ9UH36 339 aa12.94□□□□□ -0.34
ATG4B-211ENST00000429899 TFRCP02786 760 aaKnown RBP12.93□□□□□ -0.34
ATG4B-211ENST00000429899 SYN1P17600 705 aa12.93□□□□□ -0.34
ATG4B-211ENST00000429899 OSBPP22059 807 aa12.93□□□□□ -0.34
ATG4B-211ENST00000429899 KLRK1P26718 216 aa12.93□□□□□ -0.34
ATG4B-211ENST00000429899 PSMC4P43686 418 aa12.93□□□□□ -0.34
ATG4B-211ENST00000429899 MMP14P50281 582 aa12.93□□□□□ -0.34
ATG4B-211ENST00000429899 DLGAP5Q15398 846 aa12.93□□□□□ -0.34
ATG4B-211ENST00000429899 CCDC27Q2M243 656 aa12.93□□□□□ -0.34
ATG4B-211ENST00000429899 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.93□□□□□ -0.34
ATG4B-211ENST00000429899 PPP2R3BQ9Y5P8 575 aa12.93□□□□□ -0.34
ATG4B-211ENST00000429899 MYPNQ86TC9 1320 aa12.92□□□□□ -0.34
ATG4B-211ENST00000429899 FMNL1O95466 1100 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-211ENST00000429899 TMPOP42166 694 aaKnown RBP12.92□□□□□ -0.34
ATG4B-211ENST00000429899 MAGEA10P43363 369 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-211ENST00000429899 GTF2A2P52657 109 aa12.92□□□□□ -0.34
ATG4B-211ENST00000429899 GTF2IP78347 998 aa12.92□□□□□ -0.34
ATG4B-211ENST00000429899 TRIM28Q13263 835 aaKnown RBP12.92□□□□□ -0.34
ATG4B-211ENST00000429899 CCDC152Q4G0S7 254 aa12.92□□□□□ -0.34
ATG4B-211ENST00000429899 DDX60LQ5H9U9 1706 aaKnown RBP12.92□□□□□ -0.34
ATG4B-211ENST00000429899 ANKRD18AQ8IVF6 992 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms