RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 IFIT2P09913 472 aaKnown RBP17.89■□□□□ 0.46
SGCE-204ENST00000428696 TDRD7Q8NHU6 1098 aaKnown RBP17.89■□□□□ 0.46
SGCE-204ENST00000428696 LRRCC1Q9C099 1032 aa17.89■□□□□ 0.46
SGCE-204ENST00000428696 DICER1Q9UPY3 1922 aaKnown RBP17.89■□□□□ 0.45
SGCE-204ENST00000428696 EPHX2P34913 555 aa17.89■□□□□ 0.45
SGCE-204ENST00000428696 CCDC158Q5M9N0 1113 aa17.89■□□□□ 0.45
SGCE-204ENST00000428696 TTC39AQ5SRH9 613 aa17.89■□□□□ 0.45
SGCE-204ENST00000428696 DACT2Q5SW24 774 aa17.89■□□□□ 0.45
SGCE-204ENST00000428696 EAF2Q96CJ1 260 aaPredicted RBP17.89■□□□□ 0.45
SGCE-204ENST00000428696 DBNDD2Q9BQY9 259 aa17.89■□□□□ 0.45
SGCE-204ENST00000428696 DCTPP1Q9H773 170 aa17.89■□□□□ 0.45
SGCE-204ENST00000428696 GPR108Q9NPR9 543 aa17.89■□□□□ 0.45
SGCE-204ENST00000428696 GPRC5DQ9NZD1 345 aa17.89■□□□□ 0.45
SGCE-204ENST00000428696 SHTN1A0MZ66 631 aa17.88■□□□□ 0.45
SGCE-204ENST00000428696 SCNN1DP51172 638 aa17.88■□□□□ 0.45
SGCE-204ENST00000428696 KIAA0825Q8IV33 1275 aa17.88■□□□□ 0.45
SGCE-204ENST00000428696 MICALL2Q8IY33 904 aa17.88■□□□□ 0.45
SGCE-204ENST00000428696 OGFOD1Q8N543 542 aa17.88■□□□□ 0.45
SGCE-204ENST00000428696 POTECB2RU33 542 aa17.87■□□□□ 0.45
SGCE-204ENST00000428696 USP17L8P0C7I0 530 aa17.87■□□□□ 0.45
SGCE-204ENST00000428696 RPS12P25398 132 aaKnown RBP17.87■□□□□ 0.45
SGCE-204ENST00000428696 MFSD14BQ5SR56 506 aa17.87■□□□□ 0.45
SGCE-204ENST00000428696 ANKRD45Q5TZF3 282 aa17.87■□□□□ 0.45
SGCE-204ENST00000428696 B4GALNT3Q6L9W6 998 aa17.87■□□□□ 0.45
SGCE-204ENST00000428696 L3MBTL3Q96JM7 780 aaPredicted RBP17.87■□□□□ 0.45
SGCE-204ENST00000428696 TLR7Q9NYK1 1049 aaKnown RBP17.87■□□□□ 0.45
SGCE-204ENST00000428696 TBC1D10BQ4KMP7 808 aaPredicted RBP17.86■□□□□ 0.45
SGCE-204ENST00000428696 AGBL3Q8NEM8 1001 aa17.86■□□□□ 0.45
SGCE-204ENST00000428696 TAF1DQ9H5J8 278 aaPredicted RBP17.86■□□□□ 0.45
SGCE-204ENST00000428696 SNRKQ9NRH2 765 aa17.86■□□□□ 0.45
SGCE-204ENST00000428696 IGHDP01880 384 aa17.85■□□□□ 0.45
SGCE-204ENST00000428696 HDAC1Q13547 482 aaPredicted RBP17.85■□□□□ 0.45
SGCE-204ENST00000428696 SAMD7Q7Z3H4 446 aa17.85■□□□□ 0.45
SGCE-204ENST00000428696 DPF2Q92785 391 aa17.85■□□□□ 0.45
SGCE-204ENST00000428696 DBNLQ9UJU6 430 aaKnown RBP17.85■□□□□ 0.45
SGCE-204ENST00000428696 DENND2AQ9ULE3 1009 aa17.85■□□□□ 0.45
SGCE-204ENST00000428696 ZNF609O15014 1411 aa17.84■□□□□ 0.45
SGCE-204ENST00000428696 UQCRFS1P1P0C7P4 283 aa17.84■□□□□ 0.45
SGCE-204ENST00000428696 RBM5P52756 815 aaKnown RBP eCLIP17.84■□□□□ 0.45
SGCE-204ENST00000428696 CERS5Q8N5B7 392 aa17.84■□□□□ 0.45
SGCE-204ENST00000428696 ADARB2Q9NS39 739 aaKnown RBP17.84■□□□□ 0.45
SGCE-204ENST00000428696 ABCF2Q9UG63 623 aa17.84■□□□□ 0.45
SGCE-204ENST00000428696 HDAC9Q9UKV0 1011 aa17.84■□□□□ 0.45
SGCE-204ENST00000428696 KIF3CO14782 793 aa17.83■□□□□ 0.45
SGCE-204ENST00000428696 RASGRF1Q13972 1273 aa17.83■□□□□ 0.45
SGCE-204ENST00000428696 PNMA8AQ86V59 439 aaPredicted RBP17.83■□□□□ 0.45
SGCE-204ENST00000428696 WDR66Q8TBY9 1149 aa17.83■□□□□ 0.45
SGCE-204ENST00000428696 TBC1D22AQ8WUA7 517 aa17.83■□□□□ 0.45
SGCE-204ENST00000428696 FAM205AQ6ZU69 1335 aa17.83■□□□□ 0.44
SGCE-204ENST00000428696 MYO3BQ8WXR4 1341 aa17.83■□□□□ 0.44
SGCE-204ENST00000428696 A0A1B0GUL6 1792 aa17.83■□□□□ 0.44
SGCE-204ENST00000428696 SPATA5Q8NB90 893 aa17.82■□□□□ 0.44
SGCE-204ENST00000428696 GCC1Q96CN9 775 aa17.82■□□□□ 0.44
SGCE-204ENST00000428696 TTF2Q9UNY4 1162 aaKnown RBP17.82■□□□□ 0.44
SGCE-204ENST00000428696 SEMA3EO15041 775 aa17.81■□□□□ 0.44
SGCE-204ENST00000428696 POTEIP0CG38 1075 aa17.81■□□□□ 0.44
SGCE-204ENST00000428696 POTEJP0CG39 1038 aa17.81■□□□□ 0.44
SGCE-204ENST00000428696 SCARF1Q14162 830 aa17.81■□□□□ 0.44
SGCE-204ENST00000428696 PI16Q6UXB8 463 aa17.81■□□□□ 0.44
SGCE-204ENST00000428696 GMLQ99445 158 aa17.81■□□□□ 0.44
SGCE-204ENST00000428696 MYOZ2Q9NPC6 264 aa17.81■□□□□ 0.44
SGCE-204ENST00000428696 HMG20BQ9P0W2 317 aa17.81■□□□□ 0.44
SGCE-204ENST00000428696 SCN9AQ15858 1988 aa17.81■□□□□ 0.44
SGCE-204ENST00000428696 GRIK5Q16478 980 aa17.81■□□□□ 0.44
SGCE-204ENST00000428696 TBC1D9Q6ZT07 1266 aa17.81■□□□□ 0.44
SGCE-204ENST00000428696 USP50Q70EL3 339 aaPredicted RBP17.81■□□□□ 0.44
SGCE-204ENST00000428696 TRPM4Q8TD43 1214 aa17.81■□□□□ 0.44
SGCE-204ENST00000428696 TOMM70O94826 608 aa17.8■□□□□ 0.44
SGCE-204ENST00000428696 EGFRP00533 1210 aa17.8■□□□□ 0.44
SGCE-204ENST00000428696 LDHBP07195 334 aaKnown RBP17.8■□□□□ 0.44
SGCE-204ENST00000428696 DLGAP5Q15398 846 aa17.8■□□□□ 0.44
SGCE-204ENST00000428696 KIF4BQ2VIQ3 1234 aa17.8■□□□□ 0.44
SGCE-204ENST00000428696 KCNA4P22459 653 aa17.79■□□□□ 0.44
SGCE-204ENST00000428696 ARID4AP29374 1257 aaPredicted RBP17.79■□□□□ 0.44
SGCE-204ENST00000428696 MCAMP43121 646 aa17.79■□□□□ 0.44
SGCE-204ENST00000428696 FKBP1AP62942 108 aaKnown RBP17.79■□□□□ 0.44
SGCE-204ENST00000428696 GPATCH3Q96I76 525 aa17.79■□□□□ 0.44
SGCE-204ENST00000428696 LRP2BPQ9P2M1 347 aa17.79■□□□□ 0.44
SGCE-204ENST00000428696 NDUFB9Q9Y6M9 179 aa17.79■□□□□ 0.44
SGCE-204ENST00000428696 ZAP70P43403 619 aa17.78■□□□□ 0.44
SGCE-204ENST00000428696 HIRAP54198 1017 aaPredicted RBP17.78■□□□□ 0.44
SGCE-204ENST00000428696 ZNF280AP59817 542 aaPredicted RBP17.78■□□□□ 0.44
SGCE-204ENST00000428696 CFAP100Q494V2 611 aa17.78■□□□□ 0.44
SGCE-204ENST00000428696 MAP1SQ66K74 1059 aaPredicted RBP17.78■□□□□ 0.44
SGCE-204ENST00000428696 SPTY2D1Q68D10 685 aaPredicted RBP17.78■□□□□ 0.44
SGCE-204ENST00000428696 LDHDQ86WU2 507 aa17.78■□□□□ 0.44
SGCE-204ENST00000428696 ZGPATQ8N5A5 531 aaKnown RBP17.78■□□□□ 0.44
SGCE-204ENST00000428696 DNAJC2Q99543 621 aaKnown RBP17.78■□□□□ 0.44
SGCE-204ENST00000428696 LNPKQ9C0E8 428 aa17.78■□□□□ 0.44
SGCE-204ENST00000428696 BOLA2Q9H3K6 86 aa17.78■□□□□ 0.44
SGCE-204ENST00000428696 RAI14Q9P0K7 980 aa17.78■□□□□ 0.44
SGCE-204ENST00000428696 WDR90Q96KV7 1748 aa17.77■□□□□ 0.44
SGCE-204ENST00000428696 PRDX5P30044 214 aa17.77■□□□□ 0.44
SGCE-204ENST00000428696 TSHZ3Q63HK5 1081 aa17.77■□□□□ 0.44
SGCE-204ENST00000428696 DZIP1Q86YF9 867 aaKnown RBP17.77■□□□□ 0.44
SGCE-204ENST00000428696 NBPF9Q3BBW0 867 aa17.76■□□□□ 0.43
SGCE-204ENST00000428696 CHADLQ6NUI6 762 aa17.76■□□□□ 0.43
SGCE-204ENST00000428696 PPP4R3CPQ6ZMV5 832 aa17.76■□□□□ 0.43
SGCE-204ENST00000428696 ERICH6Q7L0X2 663 aa17.76■□□□□ 0.43
SGCE-204ENST00000428696 SMC1BQ8NDV3 1235 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms