RNA–Protein interactions for RNA: ENST00000428253.1

MMP11-202, Transcript of matrix metallopeptidase 11, humanhuman

TSL 4

Gene MMP11, Length 537 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-202ENST00000428253 VPS37DQ86XT2 251 aa22.07■■□□□ 1.12
MMP11-202ENST00000428253 RHPN1Q8TCX5 695 aa22.07■■□□□ 1.12
MMP11-202ENST00000428253 ADARB2Q9NS39 739 aaKnown RBP22.07■■□□□ 1.12
MMP11-202ENST00000428253 IQSEC3Q9UPP2 1182 aaPredicted RBP22.07■■□□□ 1.12
MMP11-202ENST00000428253 RAB11FIP3O75154 756 aa22.06■■□□□ 1.12
MMP11-202ENST00000428253 USP50Q70EL3 339 aaPredicted RBP22.06■■□□□ 1.12
MMP11-202ENST00000428253 PNMA8AQ86V59 439 aaPredicted RBP22.06■■□□□ 1.12
MMP11-202ENST00000428253 RBM46Q8TBY0 533 aaKnown RBP22.06■■□□□ 1.12
MMP11-202ENST00000428253 EAF2Q96CJ1 260 aaPredicted RBP22.06■■□□□ 1.12
MMP11-202ENST00000428253 DCTPP1Q9H773 170 aa22.06■■□□□ 1.12
MMP11-202ENST00000428253 COL1A1P02452 1464 aaPredicted RBP22.06■■□□□ 1.12
MMP11-202ENST00000428253 HIRAP54198 1017 aaPredicted RBP22.05■■□□□ 1.12
MMP11-202ENST00000428253 NEUROD6Q96NK8 337 aa22.05■■□□□ 1.12
MMP11-202ENST00000428253 H7C1D1 291 aa22.04■■□□□ 1.12
MMP11-202ENST00000428253 EGFRP00533 1210 aa22.04■■□□□ 1.12
MMP11-202ENST00000428253 USP17L8P0C7I0 530 aa22.04■■□□□ 1.12
MMP11-202ENST00000428253 MMP14P50281 582 aa22.04■■□□□ 1.12
MMP11-202ENST00000428253 TRPM4Q8TD43 1214 aa22.04■■□□□ 1.12
MMP11-202ENST00000428253 FBXW7Q969H0 707 aa22.04■■□□□ 1.12
MMP11-202ENST00000428253 KIF1BPQ96EK5 621 aa22.04■■□□□ 1.12
MMP11-202ENST00000428253 JAG2Q9Y219 1238 aa22.04■■□□□ 1.12
MMP11-202ENST00000428253 MYH13Q9UKX3 1938 aa22.04■■□□□ 1.12
MMP11-202ENST00000428253 SEMA3EO15041 775 aa22.03■■□□□ 1.12
MMP11-202ENST00000428253 DBNDD2Q9BQY9 259 aa22.03■■□□□ 1.12
MMP11-202ENST00000428253 PGAP2Q9UHJ9 254 aa22.03■■□□□ 1.12
MMP11-202ENST00000428253 DBNLQ9UJU6 430 aaKnown RBP22.03■■□□□ 1.12
MMP11-202ENST00000428253 HDAC1Q13547 482 aaPredicted RBP22.02■■□□□ 1.12
MMP11-202ENST00000428253 MFSD14BQ5SR56 506 aa22.02■■□□□ 1.12
MMP11-202ENST00000428253 SAMD7Q7Z3H4 446 aa22.02■■□□□ 1.12
MMP11-202ENST00000428253 LDHDQ86WU2 507 aa22.02■■□□□ 1.12
MMP11-202ENST00000428253 C16orf71Q8IYS4 520 aaPredicted RBP22.02■■□□□ 1.12
MMP11-202ENST00000428253 GNL3LQ9NVN8 582 aaKnown RBP22.02■■□□□ 1.12
MMP11-202ENST00000428253 PDS5AQ29RF7 1337 aaKnown RBP22.02■■□□□ 1.12
MMP11-202ENST00000428253 ARID4AP29374 1257 aaPredicted RBP22.01■■□□□ 1.11
MMP11-202ENST00000428253 RASGRF1Q13972 1273 aa22.01■■□□□ 1.11
MMP11-202ENST00000428253 KIAA0825Q8IV33 1275 aa22.01■■□□□ 1.11
MMP11-202ENST00000428253 TBC1D22AQ8WUA7 517 aa22.01■■□□□ 1.11
MMP11-202ENST00000428253 IL1RAPL2Q9NP60 686 aa22.01■■□□□ 1.11
MMP11-202ENST00000428253 TLR7Q9NYK1 1049 aaKnown RBP22.01■■□□□ 1.11
MMP11-202ENST00000428253 FRAT2O75474 233 aaPredicted RBP22■■□□□ 1.11
MMP11-202ENST00000428253 CHAF1AQ13111 956 aaPredicted RBP22■■□□□ 1.11
MMP11-202ENST00000428253 GRIK5Q16478 980 aa22■■□□□ 1.11
MMP11-202ENST00000428253 EAPPQ56P03 285 aaPredicted RBP22■■□□□ 1.11
MMP11-202ENST00000428253 ZBED3Q96IU2 234 aaPredicted RBP22■■□□□ 1.11
MMP11-202ENST00000428253 ZNF512BQ96KM6 892 aaPredicted RBP22■■□□□ 1.11
MMP11-202ENST00000428253 DENND2AQ9ULE3 1009 aa22■■□□□ 1.11
MMP11-202ENST00000428253 IRX6P78412 446 aaPredicted RBP21.99■■□□□ 1.11
MMP11-202ENST00000428253 FSTL1Q12841 308 aa21.99■■□□□ 1.11
MMP11-202ENST00000428253 TBC1D10BQ4KMP7 808 aaPredicted RBP21.99■■□□□ 1.11
MMP11-202ENST00000428253 CHADLQ6NUI6 762 aa21.99■■□□□ 1.11
MMP11-202ENST00000428253 SMC1BQ8NDV3 1235 aa21.99■■□□□ 1.11
MMP11-202ENST00000428253 WDR66Q8TBY9 1149 aa21.99■■□□□ 1.11
MMP11-202ENST00000428253 ZC3H15Q8WU90 426 aaKnown RBP21.99■■□□□ 1.11
MMP11-202ENST00000428253 CCDC8Q9H0W5 538 aaPredicted RBP21.99■■□□□ 1.11
MMP11-202ENST00000428253 MYOZ2Q9NPC6 264 aa21.99■■□□□ 1.11
MMP11-202ENST00000428253 AKAP11Q9UKA4 1901 aa21.99■■□□□ 1.11
MMP11-202ENST00000428253 SALL1Q9NSC2 1324 aa21.99■■□□□ 1.11
MMP11-202ENST00000428253 APBB1O00213 710 aa21.98■■□□□ 1.11
MMP11-202ENST00000428253 C1QTNF8P60827 252 aa21.98■■□□□ 1.11
MMP11-202ENST00000428253 SCARF1Q14162 830 aa21.98■■□□□ 1.11
MMP11-202ENST00000428253 KIF4BQ2VIQ3 1234 aa21.98■■□□□ 1.11
MMP11-202ENST00000428253 AACSQ86V21 672 aa21.98■■□□□ 1.11
MMP11-202ENST00000428253 CLASRPQ8N2M8 674 aaKnown RBP21.98■■□□□ 1.11
MMP11-202ENST00000428253 LRRCC1Q9C099 1032 aa21.98■■□□□ 1.11
MMP11-202ENST00000428253 SUGT1Q9Y2Z0 365 aa21.98■■□□□ 1.11
MMP11-202ENST00000428253 UQCRFS1P1P0C7P4 283 aa21.97■■□□□ 1.11
MMP11-202ENST00000428253 MCAMP43121 646 aa21.97■■□□□ 1.11
MMP11-202ENST00000428253 GORABQ5T7V8 394 aa21.97■■□□□ 1.11
MMP11-202ENST00000428253 OGFOD1Q8N543 542 aa21.97■■□□□ 1.11
MMP11-202ENST00000428253 MTMR14Q8NCE2 650 aa21.97■■□□□ 1.11
MMP11-202ENST00000428253 HMG20BQ9P0W2 317 aa21.97■■□□□ 1.11
MMP11-202ENST00000428253 ITGBL1O95965 494 aaPredicted RBP21.96■■□□□ 1.11
MMP11-202ENST00000428253 CCDC158Q5M9N0 1113 aa21.96■■□□□ 1.11
MMP11-202ENST00000428253 HDAC9Q9UKV0 1011 aa21.96■■□□□ 1.11
MMP11-202ENST00000428253 RBM26Q5T8P6 1007 aaKnown RBP21.95■■□□□ 1.1
MMP11-202ENST00000428253 PI16Q6UXB8 463 aa21.95■■□□□ 1.1
MMP11-202ENST00000428253 MRIQ9BWK5 157 aa21.95■■□□□ 1.1
MMP11-202ENST00000428253 F8W031 263 aaPredicted RBP21.94■■□□□ 1.1
MMP11-202ENST00000428253 WNT10BO00744 389 aa21.94■■□□□ 1.1
MMP11-202ENST00000428253 SMARCA5O60264 1052 aaPredicted RBP21.94■■□□□ 1.1
MMP11-202ENST00000428253 HDLBPQ00341 1268 aaKnown RBP21.94■■□□□ 1.1
MMP11-202ENST00000428253 MAP1SQ66K74 1059 aaPredicted RBP21.94■■□□□ 1.1
MMP11-202ENST00000428253 SPATA5Q8NB90 893 aa21.94■■□□□ 1.1
MMP11-202ENST00000428253 TTF2Q9UNY4 1162 aaKnown RBP21.94■■□□□ 1.1
MMP11-202ENST00000428253 ASTN2O75129 1339 aaPredicted RBP21.94■■□□□ 1.1
MMP11-202ENST00000428253 POLR2AP24928 1970 aaKnown RBP21.94■■□□□ 1.1
MMP11-202ENST00000428253 IGHDP01880 384 aa21.93■■□□□ 1.1
MMP11-202ENST00000428253 PRDX5P30044 214 aa21.93■■□□□ 1.1
MMP11-202ENST00000428253 NBPF9Q3BBW0 867 aa21.93■■□□□ 1.1
MMP11-202ENST00000428253 TTC39AQ5SRH9 613 aa21.93■■□□□ 1.1
MMP11-202ENST00000428253 SERPINA10Q9UK55 444 aa21.93■■□□□ 1.1
MMP11-202ENST00000428253 CLEC11AQ9Y240 323 aa21.93■■□□□ 1.1
MMP11-202ENST00000428253 PCDHAC2Q9Y5I4 1007 aa21.93■■□□□ 1.1
MMP11-202ENST00000428253 SMC5Q8IY18 1101 aa21.92■■□□□ 1.1
MMP11-202ENST00000428253 CNTROBQ8N137 903 aa21.92■■□□□ 1.1
MMP11-202ENST00000428253 GCC1Q96CN9 775 aa21.92■■□□□ 1.1
MMP11-202ENST00000428253 PASKQ96RG2 1323 aa21.91■■□□□ 1.1
MMP11-202ENST00000428253 SPDYE2BA6NHP3 402 aa21.91■■□□□ 1.1
MMP11-202ENST00000428253 IFIT2P09913 472 aaKnown RBP21.91■■□□□ 1.1
MMP11-202ENST00000428253 SPDYE6P0CI01 402 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms