RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 FKBP1BP68106 108 aa34.29■■■■□ 3.08
LMO1-202ENST00000428101 SMC4Q9NTJ3 1288 aa34.29■■■■□ 3.08
LMO1-202ENST00000428101 SLC10A3P09131 477 aa34.27■■■■□ 3.08
LMO1-202ENST00000428101 FKBP1AP62942 108 aaKnown RBP34.27■■■■□ 3.08
LMO1-202ENST00000428101 JAG2Q9Y219 1238 aa34.27■■■■□ 3.08
LMO1-202ENST00000428101 MROH5Q6ZUA9 1318 aa34.27■■■■□ 3.08
LMO1-202ENST00000428101 LRRC24Q50LG9 513 aa34.26■■■■□ 3.08
LMO1-202ENST00000428101 MOB2Q70IA6 237 aa34.26■■■■□ 3.08
LMO1-202ENST00000428101 CT47B1P0C2W7 299 aaPredicted RBP34.25■■■■□ 3.07
LMO1-202ENST00000428101 GYG1P46976 350 aa34.25■■■■□ 3.07
LMO1-202ENST00000428101 KIF23Q02241 960 aaPredicted RBP34.25■■■■□ 3.07
LMO1-202ENST00000428101 MTMR14Q8NCE2 650 aa34.25■■■■□ 3.07
LMO1-202ENST00000428101 TDRD7Q8NHU6 1098 aaKnown RBP34.25■■■■□ 3.07
LMO1-202ENST00000428101 FAM84BQ96KN1 310 aaPredicted RBP34.25■■■■□ 3.07
LMO1-202ENST00000428101 PCDHAC2Q9Y5I4 1007 aa34.24■■■■□ 3.07
LMO1-202ENST00000428101 CASP8AP2Q9UKL3 1982 aa34.23■■■■□ 3.07
LMO1-202ENST00000428101 F8W031 263 aaPredicted RBP34.23■■■■□ 3.07
LMO1-202ENST00000428101 DLGAP5Q15398 846 aa34.23■■■■□ 3.07
LMO1-202ENST00000428101 RASAL3Q86YV0 1011 aa34.23■■■■□ 3.07
LMO1-202ENST00000428101 APOBEC3FQ8IUX4 373 aaKnown RBP34.23■■■■□ 3.07
LMO1-202ENST00000428101 FAM205AQ6ZU69 1335 aa34.23■■■■□ 3.07
LMO1-202ENST00000428101 HIBADHP31937 336 aaKnown RBP34.22■■■■□ 3.07
LMO1-202ENST00000428101 KLHDC4Q8TBB5 520 aa34.22■■■■□ 3.07
LMO1-202ENST00000428101 ECM29Q5VYK3 1845 aa34.21■■■■□ 3.07
LMO1-202ENST00000428101 UBE2Q2LH0YL09 131 aa34.21■■■■□ 3.07
LMO1-202ENST00000428101 VGLL2Q8N8G2 317 aa34.21■■■■□ 3.07
LMO1-202ENST00000428101 NOB1Q9ULX3 412 aaKnown RBP34.21■■■■□ 3.07
LMO1-202ENST00000428101 CFAP100Q494V2 611 aa34.19■■■■□ 3.06
LMO1-202ENST00000428101 METTL24Q5JXM2 366 aa34.19■■■■□ 3.06
LMO1-202ENST00000428101 CSRNP1Q96S65 589 aa34.19■■■■□ 3.06
LMO1-202ENST00000428101 AKAP11Q9UKA4 1901 aa34.19■■■■□ 3.06
LMO1-202ENST00000428101 FBXO33Q7Z6M2 555 aa34.18■■■■□ 3.06
LMO1-202ENST00000428101 PRMT6Q96LA8 375 aaPredicted RBP34.18■■■■□ 3.06
LMO1-202ENST00000428101 SPDYE2BA6NHP3 402 aa34.17■■■■□ 3.06
LMO1-202ENST00000428101 PDE8BO95263 885 aa34.17■■■■□ 3.06
LMO1-202ENST00000428101 SPDYE6P0CI01 402 aa34.17■■■■□ 3.06
LMO1-202ENST00000428101 NF2P35240 595 aa34.17■■■■□ 3.06
LMO1-202ENST00000428101 RFX5P48382 616 aaPredicted RBP34.17■■■■□ 3.06
LMO1-202ENST00000428101 AOX1Q06278 1338 aa34.17■■■■□ 3.06
LMO1-202ENST00000428101 TTLL12Q14166 644 aaPredicted RBP34.16■■■■□ 3.06
LMO1-202ENST00000428101 MFSD14BQ5SR56 506 aa34.16■■■■□ 3.06
LMO1-202ENST00000428101 DEFB129Q9H1M3 183 aa34.16■■■■□ 3.06
LMO1-202ENST00000428101 SAGE1Q9NXZ1 904 aa34.15■■■■□ 3.06
LMO1-202ENST00000428101 COL1A1P02452 1464 aaPredicted RBP34.14■■■■□ 3.06
LMO1-202ENST00000428101 RARSP54136 660 aaKnown RBP34.14■■■■□ 3.06
LMO1-202ENST00000428101 RNF186Q9NXI6 227 aa34.14■■■■□ 3.06
LMO1-202ENST00000428101 ARAP2Q8WZ64 1704 aa34.13■■■■□ 3.05
LMO1-202ENST00000428101 ABHD8Q96I13 439 aa34.13■■■■□ 3.05
LMO1-202ENST00000428101 API5Q9BZZ5 524 aaKnown RBP34.13■■■■□ 3.05
LMO1-202ENST00000428101 CLRN2A0PK11 232 aa34.12■■■■□ 3.05
LMO1-202ENST00000428101 PTPN12Q05209 780 aaKnown RBP34.12■■■■□ 3.05
LMO1-202ENST00000428101 VPS37DQ86XT2 251 aa34.12■■■■□ 3.05
LMO1-202ENST00000428101 MYO1BO43795 1136 aa34.11■■■■□ 3.05
LMO1-202ENST00000428101 TRPA1O75762 1119 aa34.11■■■■□ 3.05
LMO1-202ENST00000428101 PRKG1Q13976 671 aa34.11■■■■□ 3.05
LMO1-202ENST00000428101 REM2Q8IYK8 340 aaPredicted RBP34.11■■■■□ 3.05
LMO1-202ENST00000428101 TTF2Q9UNY4 1162 aaKnown RBP34.11■■■■□ 3.05
LMO1-202ENST00000428101 IQSEC3Q9UPP2 1182 aaPredicted RBP34.11■■■■□ 3.05
LMO1-202ENST00000428101 EYA2O00167 538 aa34.1■■■■□ 3.05
LMO1-202ENST00000428101 UBTFL1P0CB47 393 aaPredicted RBP34.1■■■■□ 3.05
LMO1-202ENST00000428101 FGFR2P21802 821 aa34.1■■■■□ 3.05
LMO1-202ENST00000428101 RBM5P52756 815 aaKnown RBP eCLIP34.1■■■■□ 3.05
LMO1-202ENST00000428101 CAVIN4Q5BKX8 364 aa34.1■■■■□ 3.05
LMO1-202ENST00000428101 ARMC9Q7Z3E5 817 aa34.1■■■■□ 3.05
LMO1-202ENST00000428101 BCAMP50895 628 aa34.09■■■■□ 3.05
LMO1-202ENST00000428101 SERPINA10Q9UK55 444 aa34.09■■■■□ 3.05
LMO1-202ENST00000428101 FZD1Q9UP38 647 aa34.09■■■■□ 3.05
LMO1-202ENST00000428101 PPP2R3BQ9Y5P8 575 aa34.09■■■■□ 3.05
LMO1-202ENST00000428101 PUM3Q15397 648 aaKnown RBP34.08■■■■□ 3.05
LMO1-202ENST00000428101 GRIK5Q16478 980 aa34.08■■■■□ 3.05
LMO1-202ENST00000428101 LDLRAD1Q5T700 205 aa34.08■■■■□ 3.05
LMO1-202ENST00000428101 VEZTQ9HBM0 779 aa34.08■■■■□ 3.05
LMO1-202ENST00000428101 SSC5DA1L4H1 1573 aa34.07■■■■□ 3.05
LMO1-202ENST00000428101 ATG9AQ7Z3C6 839 aa34.07■■■■□ 3.04
LMO1-202ENST00000428101 ANGEL1Q9UNK9 670 aaKnown RBP34.07■■■■□ 3.04
LMO1-202ENST00000428101 CHAF1AQ13111 956 aaPredicted RBP34.06■■■■□ 3.04
LMO1-202ENST00000428101 KIF16BQ96L93 1317 aa34.05■■■■□ 3.04
LMO1-202ENST00000428101 ARHGAP45Q92619 1136 aa34.05■■■■□ 3.04
LMO1-202ENST00000428101 IFIT1P09914 478 aaKnown RBP34.04■■■■□ 3.04
LMO1-202ENST00000428101 MAP3K11Q16584 847 aa34.04■■■■□ 3.04
LMO1-202ENST00000428101 SPDYE2Q495Y8 402 aa34.04■■■■□ 3.04
LMO1-202ENST00000428101 DZIP1LQ8IYY4 767 aaKnown RBP34.04■■■■□ 3.04
LMO1-202ENST00000428101 ZNF70Q9UC06 446 aaPredicted RBP34.04■■■■□ 3.04
LMO1-202ENST00000428101 LRRFIP2Q9Y608 721 aaKnown RBP34.04■■■■□ 3.04
LMO1-202ENST00000428101 FRAT2O75474 233 aaPredicted RBP34.03■■■■□ 3.04
LMO1-202ENST00000428101 CRKP46108 304 aa34.03■■■■□ 3.04
LMO1-202ENST00000428101 NBPF12Q5TAG4 269 aaPredicted RBP34.03■■■■□ 3.04
LMO1-202ENST00000428101 TBC1D22AQ8WUA7 517 aa34.03■■■■□ 3.04
LMO1-202ENST00000428101 MEIS3Q99687 375 aa34.03■■■■□ 3.04
LMO1-202ENST00000428101 MCOLN1Q9GZU1 580 aa34.03■■■■□ 3.04
LMO1-202ENST00000428101 TDRD3Q9H7E2 651 aaKnown RBP34.03■■■■□ 3.04
LMO1-202ENST00000428101 MKRN3Q13064 507 aaKnown RBP34.02■■■■□ 3.04
LMO1-202ENST00000428101 RASA3Q14644 834 aa34.02■■■■□ 3.04
LMO1-202ENST00000428101 INTS3Q68E01 1043 aaKnown RBP34.02■■■■□ 3.04
LMO1-202ENST00000428101 TM4SF4P48230 202 aa34.01■■■■□ 3.03
LMO1-202ENST00000428101 SUPT20HL1Q3ZLR7 823 aa34.01■■■■□ 3.03
LMO1-202ENST00000428101 LPIN2Q92539 896 aa34.01■■■■□ 3.03
LMO1-202ENST00000428101 SIL1Q9H173 461 aa34.01■■■■□ 3.03
LMO1-202ENST00000428101 FBXO3Q9UK99 471 aa34.01■■■■□ 3.03
LMO1-202ENST00000428101 CIAO1O76071 339 aa34■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms