RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 TFCP2Q12800 502 aa10.09□□□□□ -0.79
SMARCAL1-206ENST00000427645 METTL24Q5JXM2 366 aa10.09□□□□□ -0.79
SMARCAL1-206ENST00000427645 USP50Q70EL3 339 aaPredicted RBP10.09□□□□□ -0.79
SMARCAL1-206ENST00000427645 TMC4Q7Z404 712 aa10.09□□□□□ -0.79
SMARCAL1-206ENST00000427645 AACSQ86V21 672 aa10.09□□□□□ -0.79
SMARCAL1-206ENST00000427645 CAPNS2Q96L46 248 aa10.09□□□□□ -0.79
SMARCAL1-206ENST00000427645 GPR101Q96P66 508 aaPredicted RBP10.09□□□□□ -0.79
SMARCAL1-206ENST00000427645 PUS3Q9BZE2 481 aaKnown RBP10.09□□□□□ -0.79
SMARCAL1-206ENST00000427645 BCL11AQ9H165 835 aa10.09□□□□□ -0.79
SMARCAL1-206ENST00000427645 SEC31BQ9NQW1 1179 aa10.09□□□□□ -0.79
SMARCAL1-206ENST00000427645 GPRC5DQ9NZD1 345 aa10.09□□□□□ -0.79
SMARCAL1-206ENST00000427645 MAP2K1Q02750 393 aaPredicted RBP10.08□□□□□ -0.8
SMARCAL1-206ENST00000427645 TNNI3KQ59H18 835 aa10.08□□□□□ -0.8
SMARCAL1-206ENST00000427645 BMP2KLQ5H9B9 411 aa10.08□□□□□ -0.8
SMARCAL1-206ENST00000427645 EAF2Q96CJ1 260 aaPredicted RBP10.08□□□□□ -0.8
SMARCAL1-206ENST00000427645 ABHD8Q96I13 439 aa10.08□□□□□ -0.8
SMARCAL1-206ENST00000427645 GLIS2Q9BZE0 524 aaPredicted RBP10.08□□□□□ -0.8
SMARCAL1-206ENST00000427645 ANKRD2Q9GZV1 360 aa10.08□□□□□ -0.8
SMARCAL1-206ENST00000427645 TMX4Q9H1E5 349 aaPredicted RBP10.08□□□□□ -0.8
SMARCAL1-206ENST00000427645 ZNF408Q9H9D4 720 aa10.08□□□□□ -0.8
SMARCAL1-206ENST00000427645 ECHDC1Q9NTX5 307 aa10.08□□□□□ -0.8
SMARCAL1-206ENST00000427645 FPGT-TNNI3KV9GXZ4 949 aa10.08□□□□□ -0.8
SMARCAL1-206ENST00000427645 SALL3Q9BXA9 1300 aa10.07□□□□□ -0.8
SMARCAL1-206ENST00000427645 GLRX3O76003 335 aaKnown RBP10.07□□□□□ -0.8
SMARCAL1-206ENST00000427645 HIRAP54198 1017 aaPredicted RBP10.07□□□□□ -0.8
SMARCAL1-206ENST00000427645 GRAPQ13588 217 aa10.07□□□□□ -0.8
SMARCAL1-206ENST00000427645 CCDC158Q5M9N0 1113 aa10.07□□□□□ -0.8
SMARCAL1-206ENST00000427645 TTC22Q5TAA0 569 aa10.07□□□□□ -0.8
SMARCAL1-206ENST00000427645 DPP8Q6V1X1 898 aaPredicted RBP10.07□□□□□ -0.8
SMARCAL1-206ENST00000427645 SKAP1Q86WV1 359 aa10.07□□□□□ -0.8
SMARCAL1-206ENST00000427645 GRAPLQ8TC17 118 aaPredicted RBP10.07□□□□□ -0.8
SMARCAL1-206ENST00000427645 NEUROD6Q96NK8 337 aa10.07□□□□□ -0.8
SMARCAL1-206ENST00000427645 ADARB2Q9NS39 739 aaKnown RBP10.07□□□□□ -0.8
SMARCAL1-206ENST00000427645 ZNRF3Q9ULT6 936 aa10.07□□□□□ -0.8
SMARCAL1-206ENST00000427645 A0A1B0GUL7 405 aa10.06□□□□□ -0.8
SMARCAL1-206ENST00000427645 YDJCA8MPS7 323 aa10.06□□□□□ -0.8
SMARCAL1-206ENST00000427645 CELF2O95319 508 aaKnown RBP10.06□□□□□ -0.8
SMARCAL1-206ENST00000427645 TIMM10P62072 90 aa10.06□□□□□ -0.8
SMARCAL1-206ENST00000427645 UBE4AQ14139 1066 aa10.06□□□□□ -0.8
SMARCAL1-206ENST00000427645 PUM3Q15397 648 aaKnown RBP10.06□□□□□ -0.8
SMARCAL1-206ENST00000427645 GRIPAP1Q4V328 841 aa10.06□□□□□ -0.8
SMARCAL1-206ENST00000427645 GORABQ5T7V8 394 aa10.06□□□□□ -0.8
SMARCAL1-206ENST00000427645 CIAPIN1Q6FI81 312 aa10.06□□□□□ -0.8
SMARCAL1-206ENST00000427645 SP8Q8IXZ3 490 aa10.06□□□□□ -0.8
SMARCAL1-206ENST00000427645 MPNDQ8N594 471 aa10.06□□□□□ -0.8
SMARCAL1-206ENST00000427645 TRPM4Q8TD43 1214 aa10.06□□□□□ -0.8
SMARCAL1-206ENST00000427645 LPIN2Q92539 896 aa10.06□□□□□ -0.8
SMARCAL1-206ENST00000427645 CELF1Q92879 486 aaKnown RBP10.06□□□□□ -0.8
SMARCAL1-206ENST00000427645 CCDC8Q9H0W5 538 aaPredicted RBP10.06□□□□□ -0.8
SMARCAL1-206ENST00000427645 TLL2Q9Y6L7 1015 aa10.06□□□□□ -0.8
SMARCAL1-206ENST00000427645 CCDC85CA6NKD9 419 aa10.05□□□□□ -0.8
SMARCAL1-206ENST00000427645 RIMBP2O15034 1052 aa10.05□□□□□ -0.8
SMARCAL1-206ENST00000427645 IFIT1P09914 478 aaKnown RBP10.05□□□□□ -0.8
SMARCAL1-206ENST00000427645 SLC5A1P13866 664 aa10.05□□□□□ -0.8
SMARCAL1-206ENST00000427645 ATP5JP18859 108 aa10.05□□□□□ -0.8
SMARCAL1-206ENST00000427645 CHRNDQ07001 517 aa10.05□□□□□ -0.8
SMARCAL1-206ENST00000427645 ATP2B3Q16720 1220 aa10.05□□□□□ -0.8
SMARCAL1-206ENST00000427645 SAPCD2Q86UD0 394 aa10.05□□□□□ -0.8
SMARCAL1-206ENST00000427645 TICAM2Q86XR7 235 aa10.05□□□□□ -0.8
SMARCAL1-206ENST00000427645 VGLL2Q8N8G2 317 aa10.05□□□□□ -0.8
SMARCAL1-206ENST00000427645 OTUD7AQ8TE49 926 aaPredicted RBP10.05□□□□□ -0.8
SMARCAL1-206ENST00000427645 ZIC5Q96T25 663 aa10.05□□□□□ -0.8
SMARCAL1-206ENST00000427645 BEGAINQ9BUH8 593 aa10.05□□□□□ -0.8
SMARCAL1-206ENST00000427645 RTFDC1Q9BY42 306 aaPredicted RBP10.05□□□□□ -0.8
SMARCAL1-206ENST00000427645 KCNQ5Q9NR82 932 aa10.05□□□□□ -0.8
SMARCAL1-206ENST00000427645 MINPP1Q9UNW1 487 aa10.05□□□□□ -0.8
SMARCAL1-206ENST00000427645 EGFRP00533 1210 aa10.04□□□□□ -0.8
SMARCAL1-206ENST00000427645 FGFR2P21802 821 aa10.04□□□□□ -0.8
SMARCAL1-206ENST00000427645 ECE1P42892 770 aa10.04□□□□□ -0.8
SMARCAL1-206ENST00000427645 KIAA2012Q0VF49 1180 aa10.04□□□□□ -0.8
SMARCAL1-206ENST00000427645 RBM26Q5T8P6 1007 aaKnown RBP10.04□□□□□ -0.8
SMARCAL1-206ENST00000427645 CASC1Q6TDU7 716 aa10.04□□□□□ -0.8
SMARCAL1-206ENST00000427645 SAMD7Q7Z3H4 446 aa10.04□□□□□ -0.8
SMARCAL1-206ENST00000427645 USP48Q86UV5 1035 aa10.04□□□□□ -0.8
SMARCAL1-206ENST00000427645 IFNLR1Q8IU57 520 aaPredicted RBP10.04□□□□□ -0.8
SMARCAL1-206ENST00000427645 SUPT20HQ8NEM7 779 aa10.04□□□□□ -0.8
SMARCAL1-206ENST00000427645 PI4K2BQ8TCG2 481 aa10.04□□□□□ -0.8
SMARCAL1-206ENST00000427645 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.04□□□□□ -0.8
SMARCAL1-206ENST00000427645 XAGE2Q96GT9 111 aa10.04□□□□□ -0.8
SMARCAL1-206ENST00000427645 ZNF512BQ96KM6 892 aaPredicted RBP10.04□□□□□ -0.8
SMARCAL1-206ENST00000427645 DBNDD1Q9H9R9 158 aa10.04□□□□□ -0.8
SMARCAL1-206ENST00000427645 CNOT7Q9UIV1 285 aaKnown RBP10.04□□□□□ -0.8
SMARCAL1-206ENST00000427645 DBNLQ9UJU6 430 aaKnown RBP10.04□□□□□ -0.8
SMARCAL1-206ENST00000427645 LEMD3Q9Y2U8 911 aa10.04□□□□□ -0.8
SMARCAL1-206ENST00000427645 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.04□□□□□ -0.8
SMARCAL1-206ENST00000427645 TRIM6-TRIM34B2RNG4 842 aa10.03□□□□□ -0.8
SMARCAL1-206ENST00000427645 UQCRFS1P1P0C7P4 283 aa10.03□□□□□ -0.8
SMARCAL1-206ENST00000427645 SDSP20132 328 aa10.03□□□□□ -0.8
SMARCAL1-206ENST00000427645 DOK7Q18PE1 504 aa10.03□□□□□ -0.8
SMARCAL1-206ENST00000427645 MICALL2Q8IY33 904 aa10.03□□□□□ -0.8
SMARCAL1-206ENST00000427645 EVI5LQ96CN4 794 aa10.03□□□□□ -0.8
SMARCAL1-206ENST00000427645 DBNDD2Q9BQY9 259 aa10.03□□□□□ -0.8
SMARCAL1-206ENST00000427645 BACH2Q9BYV9 841 aa10.03□□□□□ -0.8
SMARCAL1-206ENST00000427645 VPS33BQ9H267 617 aa10.03□□□□□ -0.8
SMARCAL1-206ENST00000427645 NSFL1CQ9UNZ2 370 aaKnown RBP10.03□□□□□ -0.8
SMARCAL1-206ENST00000427645 TAF1P21675 1872 aa10.02□□□□□ -0.8
SMARCAL1-206ENST00000427645 PSMD14O00487 310 aa10.02□□□□□ -0.81
SMARCAL1-206ENST00000427645 TAF5LO75529 589 aa10.02□□□□□ -0.81
SMARCAL1-206ENST00000427645 GSPT1P15170 499 aaKnown RBP10.02□□□□□ -0.81
SMARCAL1-206ENST00000427645 KCNJ4P48050 445 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms