RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 RIPOR2Q9Y4F9 1068 aa12.76□□□□□ -0.37
COMMD1-202ENST00000427417 CA12O43570 354 aa12.75□□□□□ -0.37
COMMD1-202ENST00000427417 UBTFL1P0CB47 393 aaPredicted RBP12.75□□□□□ -0.37
COMMD1-202ENST00000427417 HIBADHP31937 336 aaKnown RBP12.75□□□□□ -0.37
COMMD1-202ENST00000427417 FKBP1BP68106 108 aa12.75□□□□□ -0.37
COMMD1-202ENST00000427417 METTL24Q5JXM2 366 aa12.75□□□□□ -0.37
COMMD1-202ENST00000427417 APOBEC3FQ8IUX4 373 aaKnown RBP12.75□□□□□ -0.37
COMMD1-202ENST00000427417 CCDC102AQ96A19 550 aa12.75□□□□□ -0.37
COMMD1-202ENST00000427417 KIF16BQ96L93 1317 aa12.75□□□□□ -0.37
COMMD1-202ENST00000427417 PUS3Q9BZE2 481 aaKnown RBP12.75□□□□□ -0.37
COMMD1-202ENST00000427417 FAM155AB1AL88 458 aaPredicted RBP12.74□□□□□ -0.37
COMMD1-202ENST00000427417 NF2P35240 595 aa12.74□□□□□ -0.37
COMMD1-202ENST00000427417 RARSP54136 660 aaKnown RBP12.74□□□□□ -0.37
COMMD1-202ENST00000427417 DLGAP5Q15398 846 aa12.74□□□□□ -0.37
COMMD1-202ENST00000427417 CAVIN4Q5BKX8 364 aa12.74□□□□□ -0.37
COMMD1-202ENST00000427417 MOB2Q70IA6 237 aa12.74□□□□□ -0.37
COMMD1-202ENST00000427417 VPS37DQ86XT2 251 aa12.74□□□□□ -0.37
COMMD1-202ENST00000427417 ARHGAP45Q92619 1136 aa12.74□□□□□ -0.37
COMMD1-202ENST00000427417 PCDHAC2Q9Y5I4 1007 aa12.74□□□□□ -0.37
COMMD1-202ENST00000427417 FAM205AQ6ZU69 1335 aa12.73□□□□□ -0.37
COMMD1-202ENST00000427417 CASP8AP2Q9UKL3 1982 aa12.73□□□□□ -0.37
COMMD1-202ENST00000427417 IPO8O15397 1037 aaKnown RBP12.73□□□□□ -0.37
COMMD1-202ENST00000427417 MYO1BO43795 1136 aa12.73□□□□□ -0.37
COMMD1-202ENST00000427417 PDE8BO95263 885 aa12.73□□□□□ -0.37
COMMD1-202ENST00000427417 ZNF157P51786 506 aaPredicted RBP12.73□□□□□ -0.37
COMMD1-202ENST00000427417 CERS5Q8N5B7 392 aa12.73□□□□□ -0.37
COMMD1-202ENST00000427417 MTMR14Q8NCE2 650 aa12.73□□□□□ -0.37
COMMD1-202ENST00000427417 TDRD7Q8NHU6 1098 aaKnown RBP12.73□□□□□ -0.37
COMMD1-202ENST00000427417 F8W031 263 aaPredicted RBP12.72□□□□□ -0.37
COMMD1-202ENST00000427417 GYG1P46976 350 aa12.72□□□□□ -0.37
COMMD1-202ENST00000427417 LRRC24Q50LG9 513 aa12.72□□□□□ -0.37
COMMD1-202ENST00000427417 MIER1Q8N108 512 aa12.72□□□□□ -0.37
COMMD1-202ENST00000427417 FAM84BQ96KN1 310 aaPredicted RBP12.72□□□□□ -0.37
COMMD1-202ENST00000427417 FBXO3Q9UK99 471 aa12.72□□□□□ -0.37
COMMD1-202ENST00000427417 COL1A1P02452 1464 aaPredicted RBP12.72□□□□□ -0.37
COMMD1-202ENST00000427417 PAPPA2Q9BXP8 1791 aa12.71□□□□□ -0.37
COMMD1-202ENST00000427417 FRAT2O75474 233 aaPredicted RBP12.71□□□□□ -0.37
COMMD1-202ENST00000427417 IFIT1P09914 478 aaKnown RBP12.71□□□□□ -0.37
COMMD1-202ENST00000427417 KIF23Q02241 960 aaPredicted RBP12.71□□□□□ -0.37
COMMD1-202ENST00000427417 PUM3Q15397 648 aaKnown RBP12.71□□□□□ -0.37
COMMD1-202ENST00000427417 MFSD14BQ5SR56 506 aa12.71□□□□□ -0.37
COMMD1-202ENST00000427417 REM2Q8IYK8 340 aaPredicted RBP12.71□□□□□ -0.37
COMMD1-202ENST00000427417 VGLL2Q8N8G2 317 aa12.71□□□□□ -0.37
COMMD1-202ENST00000427417 KLHDC4Q8TBB5 520 aa12.71□□□□□ -0.37
COMMD1-202ENST00000427417 ZBED3Q96IU2 234 aaPredicted RBP12.71□□□□□ -0.37
COMMD1-202ENST00000427417 AOX1Q06278 1338 aa12.7□□□□□ -0.38
COMMD1-202ENST00000427417 UBE2Q2LH0YL09 131 aa12.7□□□□□ -0.38
COMMD1-202ENST00000427417 EYA2O00167 538 aa12.7□□□□□ -0.38
COMMD1-202ENST00000427417 GNAI3P08754 354 aa12.7□□□□□ -0.38
COMMD1-202ENST00000427417 SLC10A3P09131 477 aa12.7□□□□□ -0.38
COMMD1-202ENST00000427417 RBM5P52756 815 aaKnown RBP eCLIP12.7□□□□□ -0.38
COMMD1-202ENST00000427417 HNRNPUQ00839 825 aaKnown RBP eCLIP12.7□□□□□ -0.38
COMMD1-202ENST00000427417 PTPN12Q05209 780 aaKnown RBP12.7□□□□□ -0.38
COMMD1-202ENST00000427417 PRKG1Q13976 671 aa12.7□□□□□ -0.38
COMMD1-202ENST00000427417 TTLL12Q14166 644 aaPredicted RBP12.7□□□□□ -0.38
COMMD1-202ENST00000427417 CFAP100Q494V2 611 aa12.7□□□□□ -0.38
COMMD1-202ENST00000427417 INTS3Q68E01 1043 aaKnown RBP12.7□□□□□ -0.38
COMMD1-202ENST00000427417 FBXO33Q7Z6M2 555 aa12.7□□□□□ -0.38
COMMD1-202ENST00000427417 RASAL3Q86YV0 1011 aa12.7□□□□□ -0.38
COMMD1-202ENST00000427417 TBC1D22AQ8WUA7 517 aa12.7□□□□□ -0.38
COMMD1-202ENST00000427417 FZD1Q9UP38 647 aa12.7□□□□□ -0.38
COMMD1-202ENST00000427417 PPP2R3BQ9Y5P8 575 aa12.7□□□□□ -0.38
COMMD1-202ENST00000427417 SPDYE2BA6NHP3 402 aa12.69□□□□□ -0.38
COMMD1-202ENST00000427417 CIAO1O76071 339 aa12.69□□□□□ -0.38
COMMD1-202ENST00000427417 SPDYE6P0CI01 402 aa12.69□□□□□ -0.38
COMMD1-202ENST00000427417 SLC5A1P13866 664 aa12.69□□□□□ -0.38
COMMD1-202ENST00000427417 RFX5P48382 616 aaPredicted RBP12.69□□□□□ -0.38
COMMD1-202ENST00000427417 ARMC9Q7Z3E5 817 aa12.69□□□□□ -0.38
COMMD1-202ENST00000427417 LPIN2Q92539 896 aa12.69□□□□□ -0.38
COMMD1-202ENST00000427417 DEFB129Q9H1M3 183 aa12.69□□□□□ -0.38
COMMD1-202ENST00000427417 SERPINA10Q9UK55 444 aa12.69□□□□□ -0.38
COMMD1-202ENST00000427417 TTF2Q9UNY4 1162 aaKnown RBP12.69□□□□□ -0.38
COMMD1-202ENST00000427417 CLRN2A0PK11 232 aa12.68□□□□□ -0.38
COMMD1-202ENST00000427417 FGFR2P21802 821 aa12.68□□□□□ -0.38
COMMD1-202ENST00000427417 TNFAIP1Q13829 316 aa12.68□□□□□ -0.38
COMMD1-202ENST00000427417 ATF7IPQ6VMQ6 1270 aa12.68□□□□□ -0.38
COMMD1-202ENST00000427417 FRAT1Q92837 279 aaPredicted RBP12.68□□□□□ -0.38
COMMD1-202ENST00000427417 ABHD8Q96I13 439 aa12.68□□□□□ -0.38
COMMD1-202ENST00000427417 SAGE1Q9NXZ1 904 aa12.68□□□□□ -0.38
COMMD1-202ENST00000427417 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.68□□□□□ -0.38
COMMD1-202ENST00000427417 IQSEC3Q9UPP2 1182 aaPredicted RBP12.68□□□□□ -0.38
COMMD1-202ENST00000427417 LRRFIP2Q9Y608 721 aaKnown RBP12.68□□□□□ -0.38
COMMD1-202ENST00000427417 ECM29Q5VYK3 1845 aa12.67□□□□□ -0.38
COMMD1-202ENST00000427417 AKAP11Q9UKA4 1901 aa12.67□□□□□ -0.38
COMMD1-202ENST00000427417 IL15P40933 162 aaPredicted RBP12.67□□□□□ -0.38
COMMD1-202ENST00000427417 MKRN3Q13064 507 aaKnown RBP12.67□□□□□ -0.38
COMMD1-202ENST00000427417 CHAF1AQ13111 956 aaPredicted RBP12.67□□□□□ -0.38
COMMD1-202ENST00000427417 SUPT20HL1Q3ZLR7 823 aa12.67□□□□□ -0.38
COMMD1-202ENST00000427417 PRMT6Q96LA8 375 aaPredicted RBP12.67□□□□□ -0.38
COMMD1-202ENST00000427417 CSRNP1Q96S65 589 aa12.67□□□□□ -0.38
COMMD1-202ENST00000427417 MEIS3Q99687 375 aa12.67□□□□□ -0.38
COMMD1-202ENST00000427417 VEZTQ9HBM0 779 aa12.67□□□□□ -0.38
COMMD1-202ENST00000427417 CEP126Q9P2H0 1117 aa12.67□□□□□ -0.38
COMMD1-202ENST00000427417 SUGT1Q9Y2Z0 365 aa12.67□□□□□ -0.38
COMMD1-202ENST00000427417 MAST3O60307 1309 aa12.66□□□□□ -0.38
COMMD1-202ENST00000427417 PPP1R12BO60237 982 aaPredicted RBP12.66□□□□□ -0.38
COMMD1-202ENST00000427417 TRPA1O75762 1119 aa12.66□□□□□ -0.38
COMMD1-202ENST00000427417 TRIM27P14373 513 aa12.66□□□□□ -0.38
COMMD1-202ENST00000427417 BCAMP50895 628 aa12.66□□□□□ -0.38
COMMD1-202ENST00000427417 HDLBPQ00341 1268 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms