RNA–Protein interactions for RNA: ENST00000427167.5

SEMA3C-204, Transcript of semaphorin 3C, humanhuman

TSL 3

Gene SEMA3C, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-204ENST00000427167 RFX5P48382 616 aaPredicted RBP28.46■■■□□ 2.15
SEMA3C-204ENST00000427167 MAP2K1Q02750 393 aaPredicted RBP28.46■■■□□ 2.15
SEMA3C-204ENST00000427167 MEIS3Q99687 375 aa28.46■■■□□ 2.15
SEMA3C-204ENST00000427167 THSD7BQ9C0I4 1608 aa28.45■■■□□ 2.14
SEMA3C-204ENST00000427167 IPO8O15397 1037 aaKnown RBP28.45■■■□□ 2.14
SEMA3C-204ENST00000427167 PDE8BO95263 885 aa28.45■■■□□ 2.14
SEMA3C-204ENST00000427167 MMP14P50281 582 aa28.45■■■□□ 2.14
SEMA3C-204ENST00000427167 VPS37DQ86XT2 251 aa28.45■■■□□ 2.14
SEMA3C-204ENST00000427167 VGLL2Q8N8G2 317 aa28.44■■■□□ 2.14
SEMA3C-204ENST00000427167 TDRD7Q8NHU6 1098 aaKnown RBP28.44■■■□□ 2.14
SEMA3C-204ENST00000427167 IQSEC3Q9UPP2 1182 aaPredicted RBP28.44■■■□□ 2.14
SEMA3C-204ENST00000427167 TNNQ9UQP3 1299 aa28.44■■■□□ 2.14
SEMA3C-204ENST00000427167 EYA2O00167 538 aa28.43■■■□□ 2.14
SEMA3C-204ENST00000427167 TRIM27P14373 513 aa28.43■■■□□ 2.14
SEMA3C-204ENST00000427167 PTPN12Q05209 780 aaKnown RBP28.43■■■□□ 2.14
SEMA3C-204ENST00000427167 DLGAP5Q15398 846 aa28.43■■■□□ 2.14
SEMA3C-204ENST00000427167 IFFO2Q5TF58 517 aa28.43■■■□□ 2.14
SEMA3C-204ENST00000427167 PRAMEF18Q5VWM3 479 aa28.43■■■□□ 2.14
SEMA3C-204ENST00000427167 INTS3Q68E01 1043 aaKnown RBP28.43■■■□□ 2.14
SEMA3C-204ENST00000427167 SIL1Q9H173 461 aa28.43■■■□□ 2.14
SEMA3C-204ENST00000427167 HDAC5Q9UQL6 1122 aa28.43■■■□□ 2.14
SEMA3C-204ENST00000427167 FKBP1AP62942 108 aaKnown RBP28.42■■■□□ 2.14
SEMA3C-204ENST00000427167 CAVIN4Q5BKX8 364 aa28.42■■■□□ 2.14
SEMA3C-204ENST00000427167 CLUAP1Q96AJ1 413 aa28.42■■■□□ 2.14
SEMA3C-204ENST00000427167 PUM3Q15397 648 aaKnown RBP28.41■■■□□ 2.14
SEMA3C-204ENST00000427167 MFSD14BQ5SR56 506 aa28.41■■■□□ 2.14
SEMA3C-204ENST00000427167 ATF7IPQ6VMQ6 1270 aa28.41■■■□□ 2.14
SEMA3C-204ENST00000427167 PCDHAC2Q9Y5I4 1007 aa28.41■■■□□ 2.14
SEMA3C-204ENST00000427167 FAM205AQ6ZU69 1335 aa28.41■■■□□ 2.14
SEMA3C-204ENST00000427167 FRAT2O75474 233 aaPredicted RBP28.4■■■□□ 2.14
SEMA3C-204ENST00000427167 MAP2K2P36507 400 aa28.4■■■□□ 2.14
SEMA3C-204ENST00000427167 CTCFP49711 727 aaPredicted RBP28.4■■■□□ 2.14
SEMA3C-204ENST00000427167 ZBED3Q96IU2 234 aaPredicted RBP28.4■■■□□ 2.14
SEMA3C-204ENST00000427167 BEGAINQ9BUH8 593 aa28.4■■■□□ 2.14
SEMA3C-204ENST00000427167 IFIT1P09914 478 aaKnown RBP28.39■■■□□ 2.14
SEMA3C-204ENST00000427167 RBM5P52756 815 aaKnown RBP eCLIP28.39■■■□□ 2.14
SEMA3C-204ENST00000427167 CHAF1AQ13111 956 aaPredicted RBP28.39■■■□□ 2.14
SEMA3C-204ENST00000427167 CFAP100Q494V2 611 aa28.39■■■□□ 2.14
SEMA3C-204ENST00000427167 RGMBQ6NW40 437 aa28.39■■■□□ 2.14
SEMA3C-204ENST00000427167 FBXO33Q7Z6M2 555 aa28.39■■■□□ 2.14
SEMA3C-204ENST00000427167 ZBED9Q6R2W3 1325 aa28.39■■■□□ 2.13
SEMA3C-204ENST00000427167 GNAI3P08754 354 aa28.38■■■□□ 2.13
SEMA3C-204ENST00000427167 BCAMP50895 628 aa28.38■■■□□ 2.13
SEMA3C-204ENST00000427167 ZNF157P51786 506 aaPredicted RBP28.38■■■□□ 2.13
SEMA3C-204ENST00000427167 ATG9AQ7Z3C6 839 aa28.38■■■□□ 2.13
SEMA3C-204ENST00000427167 APOBEC3FQ8IUX4 373 aaKnown RBP28.38■■■□□ 2.13
SEMA3C-204ENST00000427167 TNS4Q8IZW8 715 aa28.37■■■□□ 2.13
SEMA3C-204ENST00000427167 PA2G4Q9UQ80 394 aaKnown RBP28.37■■■□□ 2.13
SEMA3C-204ENST00000427167 SLC5A1P13866 664 aa28.36■■■□□ 2.13
SEMA3C-204ENST00000427167 FGFR2P21802 821 aa28.36■■■□□ 2.13
SEMA3C-204ENST00000427167 LBX1P52954 281 aa28.36■■■□□ 2.13
SEMA3C-204ENST00000427167 NOGQ13253 232 aa28.36■■■□□ 2.13
SEMA3C-204ENST00000427167 ZKSCAN2Q63HK3 967 aa28.36■■■□□ 2.13
SEMA3C-204ENST00000427167 TTF2Q9UNY4 1162 aaKnown RBP28.36■■■□□ 2.13
SEMA3C-204ENST00000427167 PAPPA2Q9BXP8 1791 aa28.35■■■□□ 2.13
SEMA3C-204ENST00000427167 CLRN2A0PK11 232 aa28.35■■■□□ 2.13
SEMA3C-204ENST00000427167 TTLL12Q14166 644 aaPredicted RBP28.35■■■□□ 2.13
SEMA3C-204ENST00000427167 MOB2Q70IA6 237 aa28.35■■■□□ 2.13
SEMA3C-204ENST00000427167 MTMR14Q8NCE2 650 aa28.35■■■□□ 2.13
SEMA3C-204ENST00000427167 ZIC5Q96T25 663 aa28.35■■■□□ 2.13
SEMA3C-204ENST00000427167 ARAP2Q8WZ64 1704 aa28.35■■■□□ 2.13
SEMA3C-204ENST00000427167 SPDYE2BA6NHP3 402 aa28.34■■■□□ 2.13
SEMA3C-204ENST00000427167 MYO1BO43795 1136 aa28.34■■■□□ 2.13
SEMA3C-204ENST00000427167 CIAO1O76071 339 aa28.34■■■□□ 2.13
SEMA3C-204ENST00000427167 SPDYE6P0CI01 402 aa28.34■■■□□ 2.13
SEMA3C-204ENST00000427167 NF2P35240 595 aa28.34■■■□□ 2.13
SEMA3C-204ENST00000427167 FKBP1BP68106 108 aa28.34■■■□□ 2.13
SEMA3C-204ENST00000427167 LPIN2Q92539 896 aa28.34■■■□□ 2.13
SEMA3C-204ENST00000427167 PRMT6Q96LA8 375 aaPredicted RBP28.34■■■□□ 2.13
SEMA3C-204ENST00000427167 CEP126Q9P2H0 1117 aa28.34■■■□□ 2.13
SEMA3C-204ENST00000427167 FAM155AB1AL88 458 aaPredicted RBP28.33■■■□□ 2.13
SEMA3C-204ENST00000427167 HSPA8P11142 646 aaKnown RBP28.33■■■□□ 2.13
SEMA3C-204ENST00000427167 CCDC102AQ96A19 550 aa28.33■■■□□ 2.13
SEMA3C-204ENST00000427167 VEZTQ9HBM0 779 aa28.33■■■□□ 2.13
SEMA3C-204ENST00000427167 FBXO3Q9UK99 471 aa28.33■■■□□ 2.13
SEMA3C-204ENST00000427167 ECM29Q5VYK3 1845 aa28.32■■■□□ 2.12
SEMA3C-204ENST00000427167 SRGAP3O43295 1099 aa28.32■■■□□ 2.12
SEMA3C-204ENST00000427167 TMEM57Q8N5G2 664 aa28.32■■■□□ 2.12
SEMA3C-204ENST00000427167 PRDM10Q9NQV6 1147 aa28.32■■■□□ 2.12
SEMA3C-204ENST00000427167 TSKSQ9UJT2 592 aa28.32■■■□□ 2.12
SEMA3C-204ENST00000427167 AOX1Q06278 1338 aa28.32■■■□□ 2.12
SEMA3C-204ENST00000427167 UBE2Q2LH0YL09 131 aa28.31■■■□□ 2.12
SEMA3C-204ENST00000427167 IL15P40933 162 aaPredicted RBP28.31■■■□□ 2.12
SEMA3C-204ENST00000427167 PRKG1Q13976 671 aa28.31■■■□□ 2.12
SEMA3C-204ENST00000427167 ATP2B3Q16720 1220 aa28.31■■■□□ 2.12
SEMA3C-204ENST00000427167 DEFB129Q9H1M3 183 aa28.31■■■□□ 2.12
SEMA3C-204ENST00000427167 GRIK5Q16478 980 aa28.3■■■□□ 2.12
SEMA3C-204ENST00000427167 TBC1D22AQ8WUA7 517 aa28.3■■■□□ 2.12
SEMA3C-204ENST00000427167 COPRSQ9NQ92 184 aa28.3■■■□□ 2.12
SEMA3C-204ENST00000427167 SERPINA10Q9UK55 444 aa28.3■■■□□ 2.12
SEMA3C-204ENST00000427167 GNAI2P04899 355 aa28.29■■■□□ 2.12
SEMA3C-204ENST00000427167 SLC10A3P09131 477 aa28.29■■■□□ 2.12
SEMA3C-204ENST00000427167 COL1A1P02452 1464 aaPredicted RBP28.28■■■□□ 2.12
SEMA3C-204ENST00000427167 FTSJ3Q8IY81 847 aaKnown RBP28.28■■■□□ 2.12
SEMA3C-204ENST00000427167 CRKP46108 304 aa28.27■■■□□ 2.12
SEMA3C-204ENST00000427167 KIF23Q02241 960 aaPredicted RBP28.27■■■□□ 2.12
SEMA3C-204ENST00000427167 MTX1Q13505 466 aa28.27■■■□□ 2.12
SEMA3C-204ENST00000427167 RASAL3Q86YV0 1011 aa28.27■■■□□ 2.12
SEMA3C-204ENST00000427167 MYH13Q9UKX3 1938 aa28.26■■■□□ 2.11
SEMA3C-204ENST00000427167 DZIP1LQ8IYY4 767 aaKnown RBP28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms