RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 VPS37DQ86XT2 251 aa13.45□□□□□ -0.26
LINC01238-202ENST00000426962 CERS5Q8N5B7 392 aa13.45□□□□□ -0.26
LINC01238-202ENST00000426962 VGLL2Q8N8G2 317 aa13.45□□□□□ -0.26
LINC01238-202ENST00000426962 MEIS3Q99687 375 aa13.45□□□□□ -0.26
LINC01238-202ENST00000426962 WBP1LQ9NX94 342 aa13.45□□□□□ -0.26
LINC01238-202ENST00000426962 FBXO3Q9UK99 471 aa13.45□□□□□ -0.26
LINC01238-202ENST00000426962 LRRFIP2Q9Y608 721 aaKnown RBP13.45□□□□□ -0.26
LINC01238-202ENST00000426962 ZBED9Q6R2W3 1325 aa13.44□□□□□ -0.26
LINC01238-202ENST00000426962 FAM205AQ6ZU69 1335 aa13.44□□□□□ -0.26
LINC01238-202ENST00000426962 POLR2AP24928 1970 aaKnown RBP13.44□□□□□ -0.26
LINC01238-202ENST00000426962 MAP2K2P36507 400 aa13.44□□□□□ -0.26
LINC01238-202ENST00000426962 HUNKP57058 714 aa13.44□□□□□ -0.26
LINC01238-202ENST00000426962 GRM1Q13255 1194 aa13.44□□□□□ -0.26
LINC01238-202ENST00000426962 DLGAP5Q15398 846 aa13.44□□□□□ -0.26
LINC01238-202ENST00000426962 MTMR14Q8NCE2 650 aa13.44□□□□□ -0.26
LINC01238-202ENST00000426962 AIDAQ96BJ3 306 aa13.44□□□□□ -0.26
LINC01238-202ENST00000426962 CDCA5Q96FF9 252 aa13.44□□□□□ -0.26
LINC01238-202ENST00000426962 ZBED3Q96IU2 234 aaPredicted RBP13.44□□□□□ -0.26
LINC01238-202ENST00000426962 F8W031 263 aaPredicted RBP13.43□□□□□ -0.26
LINC01238-202ENST00000426962 CIAO1O76071 339 aa13.43□□□□□ -0.26
LINC01238-202ENST00000426962 IFIT1P09914 478 aaKnown RBP13.43□□□□□ -0.26
LINC01238-202ENST00000426962 FGFR2P21802 821 aa13.43□□□□□ -0.26
LINC01238-202ENST00000426962 PUM3Q15397 648 aaKnown RBP13.43□□□□□ -0.26
LINC01238-202ENST00000426962 COL13A1Q5TAT6 717 aaPredicted RBP13.43□□□□□ -0.26
LINC01238-202ENST00000426962 ZKSCAN2Q63HK3 967 aa13.43□□□□□ -0.26
LINC01238-202ENST00000426962 ATG9AQ7Z3C6 839 aa13.43□□□□□ -0.26
LINC01238-202ENST00000426962 JAG2Q9Y219 1238 aa13.43□□□□□ -0.26
LINC01238-202ENST00000426962 FOXN1O15353 648 aa13.42□□□□□ -0.26
LINC01238-202ENST00000426962 FRAT2O75474 233 aaPredicted RBP13.42□□□□□ -0.26
LINC01238-202ENST00000426962 BCAMP50895 628 aa13.42□□□□□ -0.26
LINC01238-202ENST00000426962 FKBP1BP68106 108 aa13.42□□□□□ -0.26
LINC01238-202ENST00000426962 MFSD14BQ5SR56 506 aa13.42□□□□□ -0.26
LINC01238-202ENST00000426962 LPIN2Q92539 896 aa13.42□□□□□ -0.26
LINC01238-202ENST00000426962 CLUAP1Q96AJ1 413 aa13.42□□□□□ -0.26
LINC01238-202ENST00000426962 SIL1Q9H173 461 aa13.42□□□□□ -0.26
LINC01238-202ENST00000426962 CEP126Q9P2H0 1117 aa13.42□□□□□ -0.26
LINC01238-202ENST00000426962 SCAF8Q9UPN6 1271 aaKnown RBP13.42□□□□□ -0.26
LINC01238-202ENST00000426962 MYO1BO43795 1136 aa13.41□□□□□ -0.26
LINC01238-202ENST00000426962 AOC2O75106 756 aa13.41□□□□□ -0.26
LINC01238-202ENST00000426962 SLC5A1P13866 664 aa13.41□□□□□ -0.26
LINC01238-202ENST00000426962 IL15P40933 162 aaPredicted RBP13.41□□□□□ -0.26
LINC01238-202ENST00000426962 CTCFP49711 727 aaPredicted RBP13.41□□□□□ -0.26
LINC01238-202ENST00000426962 CFAP100Q494V2 611 aa13.41□□□□□ -0.26
LINC01238-202ENST00000426962 IFFO2Q5TF58 517 aa13.41□□□□□ -0.26
LINC01238-202ENST00000426962 PRAMEF18Q5VWM3 479 aa13.41□□□□□ -0.26
LINC01238-202ENST00000426962 RGMBQ6NW40 437 aa13.41□□□□□ -0.26
LINC01238-202ENST00000426962 APOBEC3FQ8IUX4 373 aaKnown RBP13.41□□□□□ -0.26
LINC01238-202ENST00000426962 CCDC102AQ96A19 550 aa13.41□□□□□ -0.26
LINC01238-202ENST00000426962 PRMT6Q96LA8 375 aaPredicted RBP13.41□□□□□ -0.26
LINC01238-202ENST00000426962 BEGAINQ9BUH8 593 aa13.41□□□□□ -0.26
LINC01238-202ENST00000426962 COPRSQ9NQ92 184 aa13.41□□□□□ -0.26
LINC01238-202ENST00000426962 TNNQ9UQP3 1299 aa13.41□□□□□ -0.26
LINC01238-202ENST00000426962 A0A1B0GUL6 1792 aa13.4□□□□□ -0.26
LINC01238-202ENST00000426962 GNAI2P04899 355 aa13.4□□□□□ -0.26
LINC01238-202ENST00000426962 NF2P35240 595 aa13.4□□□□□ -0.26
LINC01238-202ENST00000426962 ZNF157P51786 506 aaPredicted RBP13.4□□□□□ -0.26
LINC01238-202ENST00000426962 RBM5P52756 815 aaKnown RBP eCLIP13.4□□□□□ -0.26
LINC01238-202ENST00000426962 NOGQ13253 232 aa13.4□□□□□ -0.26
LINC01238-202ENST00000426962 TBC1D22AQ8WUA7 517 aa13.4□□□□□ -0.26
LINC01238-202ENST00000426962 TTF2Q9UNY4 1162 aaKnown RBP13.4□□□□□ -0.26
LINC01238-202ENST00000426962 IQSEC3Q9UPP2 1182 aaPredicted RBP13.4□□□□□ -0.26
LINC01238-202ENST00000426962 PA2G4Q9UQ80 394 aaKnown RBP13.4□□□□□ -0.26
LINC01238-202ENST00000426962 ZNF646O15015 1829 aaPredicted RBP13.4□□□□□ -0.26
LINC01238-202ENST00000426962 SPDYE2BA6NHP3 402 aa13.39□□□□□ -0.27
LINC01238-202ENST00000426962 SRGAP3O43295 1099 aa13.39□□□□□ -0.27
LINC01238-202ENST00000426962 SPDYE6P0CI01 402 aa13.39□□□□□ -0.27
LINC01238-202ENST00000426962 CHAF1AQ13111 956 aaPredicted RBP13.39□□□□□ -0.27
LINC01238-202ENST00000426962 MTX1Q13505 466 aa13.39□□□□□ -0.27
LINC01238-202ENST00000426962 TMEM57Q8N5G2 664 aa13.39□□□□□ -0.27
LINC01238-202ENST00000426962 PRDM10Q9NQV6 1147 aa13.39□□□□□ -0.27
LINC01238-202ENST00000426962 SERPINA10Q9UK55 444 aa13.39□□□□□ -0.27
LINC01238-202ENST00000426962 PCDHAC2Q9Y5I4 1007 aa13.39□□□□□ -0.27
LINC01238-202ENST00000426962 FAM155AB1AL88 458 aaPredicted RBP13.38□□□□□ -0.27
LINC01238-202ENST00000426962 ATP2B3Q16720 1220 aa13.38□□□□□ -0.27
LINC01238-202ENST00000426962 MRIQ9BWK5 157 aa13.38□□□□□ -0.27
LINC01238-202ENST00000426962 DEFB129Q9H1M3 183 aa13.38□□□□□ -0.27
LINC01238-202ENST00000426962 SUGT1Q9Y2Z0 365 aa13.38□□□□□ -0.27
LINC01238-202ENST00000426962 LBX1P52954 281 aa13.37□□□□□ -0.27
LINC01238-202ENST00000426962 HDLBPQ00341 1268 aaKnown RBP13.37□□□□□ -0.27
LINC01238-202ENST00000426962 TTLL12Q14166 644 aaPredicted RBP13.37□□□□□ -0.27
LINC01238-202ENST00000426962 FTSJ3Q8IY81 847 aaKnown RBP13.37□□□□□ -0.27
LINC01238-202ENST00000426962 DZIP1LQ8IYY4 767 aaKnown RBP13.37□□□□□ -0.27
LINC01238-202ENST00000426962 ZIC5Q96T25 663 aa13.37□□□□□ -0.27
LINC01238-202ENST00000426962 GNL3LQ9NVN8 582 aaKnown RBP13.37□□□□□ -0.27
LINC01238-202ENST00000426962 PPP2R3BQ9Y5P8 575 aa13.37□□□□□ -0.27
LINC01238-202ENST00000426962 CLRN2A0PK11 232 aa13.36□□□□□ -0.27
LINC01238-202ENST00000426962 UBE2Q2LH0YL09 131 aa13.36□□□□□ -0.27
LINC01238-202ENST00000426962 CA12O43570 354 aa13.36□□□□□ -0.27
LINC01238-202ENST00000426962 HSPA8P11142 646 aaKnown RBP13.36□□□□□ -0.27
LINC01238-202ENST00000426962 CRKP46108 304 aa13.36□□□□□ -0.27
LINC01238-202ENST00000426962 GRIK5Q16478 980 aa13.36□□□□□ -0.27
LINC01238-202ENST00000426962 MOB2Q70IA6 237 aa13.36□□□□□ -0.27
LINC01238-202ENST00000426962 ARMC9Q7Z3E5 817 aa13.36□□□□□ -0.27
LINC01238-202ENST00000426962 WDR66Q8TBY9 1149 aa13.36□□□□□ -0.27
LINC01238-202ENST00000426962 VEZTQ9HBM0 779 aa13.36□□□□□ -0.27
LINC01238-202ENST00000426962 AKAP2Q9Y2D5 859 aa13.36□□□□□ -0.27
LINC01238-202ENST00000426962 ZBTB7BO15156 539 aaPredicted RBP13.35□□□□□ -0.27
LINC01238-202ENST00000426962 SLC10A3P09131 477 aa13.35□□□□□ -0.27
LINC01238-202ENST00000426962 TIMM10P62072 90 aa13.35□□□□□ -0.27
LINC01238-202ENST00000426962 KIF23Q02241 960 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms