RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 PGAP2Q9UHJ9 254 aa22.79■■□□□ 1.24
HDAC6-205ENST00000423941 FPGT-TNNI3KV9GXZ4 949 aa22.79■■□□□ 1.24
HDAC6-205ENST00000423941 H7C1D1 291 aa22.78■■□□□ 1.24
HDAC6-205ENST00000423941 RAB11FIP3O75154 756 aa22.78■■□□□ 1.24
HDAC6-205ENST00000423941 POTEIP0CG38 1075 aa22.78■■□□□ 1.24
HDAC6-205ENST00000423941 POTEJP0CG39 1038 aa22.78■■□□□ 1.24
HDAC6-205ENST00000423941 PHKA1P46020 1223 aa22.78■■□□□ 1.24
HDAC6-205ENST00000423941 HIRAP54198 1017 aaPredicted RBP22.78■■□□□ 1.24
HDAC6-205ENST00000423941 CCDC102BQ68D86 513 aa22.78■■□□□ 1.24
HDAC6-205ENST00000423941 LDHDQ86WU2 507 aa22.78■■□□□ 1.24
HDAC6-205ENST00000423941 C16orf71Q8IYS4 520 aaPredicted RBP22.78■■□□□ 1.24
HDAC6-205ENST00000423941 SEMA3EO15041 775 aa22.77■■□□□ 1.24
HDAC6-205ENST00000423941 USP17L8P0C7I0 530 aa22.77■■□□□ 1.24
HDAC6-205ENST00000423941 OS9Q13438 667 aaPredicted RBP22.77■■□□□ 1.24
HDAC6-205ENST00000423941 RHPN1Q8TCX5 695 aa22.77■■□□□ 1.24
HDAC6-205ENST00000423941 DCTPP1Q9H773 170 aa22.77■■□□□ 1.24
HDAC6-205ENST00000423941 EGFRP00533 1210 aa22.76■■□□□ 1.23
HDAC6-205ENST00000423941 FSTL1Q12841 308 aa22.76■■□□□ 1.23
HDAC6-205ENST00000423941 EAF2Q96CJ1 260 aaPredicted RBP22.76■■□□□ 1.23
HDAC6-205ENST00000423941 KIF1BPQ96EK5 621 aa22.76■■□□□ 1.23
HDAC6-205ENST00000423941 IQSEC3Q9UPP2 1182 aaPredicted RBP22.76■■□□□ 1.23
HDAC6-205ENST00000423941 COL1A1P02452 1464 aaPredicted RBP22.75■■□□□ 1.23
HDAC6-205ENST00000423941 C1QTNF8P60827 252 aa22.75■■□□□ 1.23
HDAC6-205ENST00000423941 SAMD7Q7Z3H4 446 aa22.75■■□□□ 1.23
HDAC6-205ENST00000423941 EXOC6Q8TAG9 804 aa22.75■■□□□ 1.23
HDAC6-205ENST00000423941 TRPM4Q8TD43 1214 aa22.75■■□□□ 1.23
HDAC6-205ENST00000423941 ZC3H15Q8WU90 426 aaKnown RBP22.75■■□□□ 1.23
HDAC6-205ENST00000423941 NEUROD6Q96NK8 337 aa22.75■■□□□ 1.23
HDAC6-205ENST00000423941 GNL3LQ9NVN8 582 aaKnown RBP22.75■■□□□ 1.23
HDAC6-205ENST00000423941 PDS5AQ29RF7 1337 aaKnown RBP22.75■■□□□ 1.23
HDAC6-205ENST00000423941 CHADLQ6NUI6 762 aa22.74■■□□□ 1.23
HDAC6-205ENST00000423941 SMC1BQ8NDV3 1235 aa22.74■■□□□ 1.23
HDAC6-205ENST00000423941 TBC1D22AQ8WUA7 517 aa22.74■■□□□ 1.23
HDAC6-205ENST00000423941 AKAP11Q9UKA4 1901 aa22.73■■□□□ 1.23
HDAC6-205ENST00000423941 ARID4AP29374 1257 aaPredicted RBP22.73■■□□□ 1.23
HDAC6-205ENST00000423941 MFSD14BQ5SR56 506 aa22.73■■□□□ 1.23
HDAC6-205ENST00000423941 FBXW7Q969H0 707 aa22.73■■□□□ 1.23
HDAC6-205ENST00000423941 ZBED3Q96IU2 234 aaPredicted RBP22.73■■□□□ 1.23
HDAC6-205ENST00000423941 ZNF512BQ96KM6 892 aaPredicted RBP22.73■■□□□ 1.23
HDAC6-205ENST00000423941 DENND2AQ9ULE3 1009 aa22.73■■□□□ 1.23
HDAC6-205ENST00000423941 EAPPQ56P03 285 aaPredicted RBP22.72■■□□□ 1.23
HDAC6-205ENST00000423941 KIAA0825Q8IV33 1275 aa22.72■■□□□ 1.23
HDAC6-205ENST00000423941 WDR66Q8TBY9 1149 aa22.72■■□□□ 1.23
HDAC6-205ENST00000423941 DBNDD2Q9BQY9 259 aa22.72■■□□□ 1.23
HDAC6-205ENST00000423941 MYOZ2Q9NPC6 264 aa22.72■■□□□ 1.23
HDAC6-205ENST00000423941 DBNLQ9UJU6 430 aaKnown RBP22.72■■□□□ 1.23
HDAC6-205ENST00000423941 JAG2Q9Y219 1238 aa22.72■■□□□ 1.23
HDAC6-205ENST00000423941 SUGT1Q9Y2Z0 365 aa22.72■■□□□ 1.23
HDAC6-205ENST00000423941 SALL1Q9NSC2 1324 aa22.72■■□□□ 1.23
HDAC6-205ENST00000423941 POLR2AP24928 1970 aaKnown RBP22.72■■□□□ 1.23
HDAC6-205ENST00000423941 FRAT2O75474 233 aaPredicted RBP22.71■■□□□ 1.23
HDAC6-205ENST00000423941 ITGBL1O95965 494 aaPredicted RBP22.71■■□□□ 1.23
HDAC6-205ENST00000423941 HDAC1Q13547 482 aaPredicted RBP22.71■■□□□ 1.23
HDAC6-205ENST00000423941 RASGRF1Q13972 1273 aa22.71■■□□□ 1.23
HDAC6-205ENST00000423941 GRIK5Q16478 980 aa22.71■■□□□ 1.23
HDAC6-205ENST00000423941 TBC1D10BQ4KMP7 808 aaPredicted RBP22.71■■□□□ 1.23
HDAC6-205ENST00000423941 OGFOD1Q8N543 542 aa22.71■■□□□ 1.23
HDAC6-205ENST00000423941 MTMR14Q8NCE2 650 aa22.71■■□□□ 1.23
HDAC6-205ENST00000423941 MRIQ9BWK5 157 aa22.71■■□□□ 1.23
HDAC6-205ENST00000423941 KIF4BQ2VIQ3 1234 aa22.7■■□□□ 1.22
HDAC6-205ENST00000423941 CCDC8Q9H0W5 538 aaPredicted RBP22.7■■□□□ 1.22
HDAC6-205ENST00000423941 IL1RAPL2Q9NP60 686 aa22.7■■□□□ 1.22
HDAC6-205ENST00000423941 CHAF1AQ13111 956 aaPredicted RBP22.69■■□□□ 1.22
HDAC6-205ENST00000423941 CLASRPQ8N2M8 674 aaKnown RBP22.69■■□□□ 1.22
HDAC6-205ENST00000423941 TLR7Q9NYK1 1049 aaKnown RBP22.69■■□□□ 1.22
HDAC6-205ENST00000423941 HDAC9Q9UKV0 1011 aa22.69■■□□□ 1.22
HDAC6-205ENST00000423941 UQCRFS1P1P0C7P4 283 aa22.68■■□□□ 1.22
HDAC6-205ENST00000423941 HDLBPQ00341 1268 aaKnown RBP22.68■■□□□ 1.22
HDAC6-205ENST00000423941 GORABQ5T7V8 394 aa22.68■■□□□ 1.22
HDAC6-205ENST00000423941 HMG20BQ9P0W2 317 aa22.68■■□□□ 1.22
HDAC6-205ENST00000423941 ECM29Q5VYK3 1845 aa22.68■■□□□ 1.22
HDAC6-205ENST00000423941 WNT10BO00744 389 aa22.67■■□□□ 1.22
HDAC6-205ENST00000423941 MCAMP43121 646 aa22.67■■□□□ 1.22
HDAC6-205ENST00000423941 SCARF1Q14162 830 aa22.67■■□□□ 1.22
HDAC6-205ENST00000423941 CCDC158Q5M9N0 1113 aa22.67■■□□□ 1.22
HDAC6-205ENST00000423941 RBM26Q5T8P6 1007 aaKnown RBP22.67■■□□□ 1.22
HDAC6-205ENST00000423941 AACSQ86V21 672 aa22.67■■□□□ 1.22
HDAC6-205ENST00000423941 CNTROBQ8N137 903 aa22.67■■□□□ 1.22
HDAC6-205ENST00000423941 LRRCC1Q9C099 1032 aa22.67■■□□□ 1.22
HDAC6-205ENST00000423941 SERPINA10Q9UK55 444 aa22.67■■□□□ 1.22
HDAC6-205ENST00000423941 CLEC11AQ9Y240 323 aa22.67■■□□□ 1.22
HDAC6-205ENST00000423941 PASKQ96RG2 1323 aa22.66■■□□□ 1.22
HDAC6-205ENST00000423941 MAP1SQ66K74 1059 aaPredicted RBP22.66■■□□□ 1.22
HDAC6-205ENST00000423941 SPATA5Q8NB90 893 aa22.66■■□□□ 1.22
HDAC6-205ENST00000423941 TTF2Q9UNY4 1162 aaKnown RBP22.66■■□□□ 1.22
HDAC6-205ENST00000423941 APBB1O00213 710 aa22.65■■□□□ 1.22
HDAC6-205ENST00000423941 NBPF9Q3BBW0 867 aa22.65■■□□□ 1.22
HDAC6-205ENST00000423941 ASTN2O75129 1339 aaPredicted RBP22.64■■□□□ 1.22
HDAC6-205ENST00000423941 PITPNM2Q9BZ72 1349 aa22.64■■□□□ 1.22
HDAC6-205ENST00000423941 F8W031 263 aaPredicted RBP22.64■■□□□ 1.21
HDAC6-205ENST00000423941 ZGPATQ8N5A5 531 aaKnown RBP22.64■■□□□ 1.21
HDAC6-205ENST00000423941 PRDX5P30044 214 aa22.63■■□□□ 1.21
HDAC6-205ENST00000423941 CFAP100Q494V2 611 aa22.63■■□□□ 1.21
HDAC6-205ENST00000423941 TTC39AQ5SRH9 613 aa22.63■■□□□ 1.21
HDAC6-205ENST00000423941 PI16Q6UXB8 463 aa22.63■■□□□ 1.21
HDAC6-205ENST00000423941 PRMT6Q96LA8 375 aaPredicted RBP22.63■■□□□ 1.21
HDAC6-205ENST00000423941 PCDHAC2Q9Y5I4 1007 aa22.63■■□□□ 1.21
HDAC6-205ENST00000423941 SPDYE2BA6NHP3 402 aa22.62■■□□□ 1.21
HDAC6-205ENST00000423941 SPDYE6P0CI01 402 aa22.62■■□□□ 1.21
HDAC6-205ENST00000423941 IRX6P78412 446 aaPredicted RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms