RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 MXD3Q9BW11 206 aa27.39■■□□□ 1.98
TRAF4-204ENST00000422344 IRS2Q9Y4H2 1338 aa27.39■■□□□ 1.97
TRAF4-204ENST00000422344 TRIM27P14373 513 aa27.38■■□□□ 1.97
TRAF4-204ENST00000422344 RGS19P49795 217 aa27.38■■□□□ 1.97
TRAF4-204ENST00000422344 KLHDC4Q8TBB5 520 aa27.38■■□□□ 1.97
TRAF4-204ENST00000422344 MYOZ2Q9NPC6 264 aa27.38■■□□□ 1.97
TRAF4-204ENST00000422344 FAM155AB1AL88 458 aaPredicted RBP27.37■■□□□ 1.97
TRAF4-204ENST00000422344 LRRC24Q50LG9 513 aa27.37■■□□□ 1.97
TRAF4-204ENST00000422344 MEIS3Q99687 375 aa27.37■■□□□ 1.97
TRAF4-204ENST00000422344 LRRFIP2Q9Y608 721 aaKnown RBP27.37■■□□□ 1.97
TRAF4-204ENST00000422344 GNAI3P08754 354 aa27.36■■□□□ 1.97
TRAF4-204ENST00000422344 ZKSCAN2Q63HK3 967 aa27.36■■□□□ 1.97
TRAF4-204ENST00000422344 GGA3Q9NZ52 723 aa27.36■■□□□ 1.97
TRAF4-204ENST00000422344 IL1R1P14778 569 aa27.35■■□□□ 1.97
TRAF4-204ENST00000422344 ZNF157P51786 506 aaPredicted RBP27.35■■□□□ 1.97
TRAF4-204ENST00000422344 SULF1Q8IWU6 871 aa27.35■■□□□ 1.97
TRAF4-204ENST00000422344 CCDC102AQ96A19 550 aa27.35■■□□□ 1.97
TRAF4-204ENST00000422344 CLUAP1Q96AJ1 413 aa27.35■■□□□ 1.97
TRAF4-204ENST00000422344 HDAC9Q9UKV0 1011 aa27.35■■□□□ 1.97
TRAF4-204ENST00000422344 ASTN2O75129 1339 aaPredicted RBP27.35■■□□□ 1.97
TRAF4-204ENST00000422344 MMP14P50281 582 aa27.34■■□□□ 1.97
TRAF4-204ENST00000422344 KIF23Q02241 960 aaPredicted RBP27.34■■□□□ 1.97
TRAF4-204ENST00000422344 SCARF1Q14162 830 aa27.34■■□□□ 1.97
TRAF4-204ENST00000422344 ZNF646O15015 1829 aaPredicted RBP27.33■■□□□ 1.97
TRAF4-204ENST00000422344 EYA2O00167 538 aa27.33■■□□□ 1.97
TRAF4-204ENST00000422344 HIBADHP31937 336 aaKnown RBP27.33■■□□□ 1.97
TRAF4-204ENST00000422344 VPS37DQ86XT2 251 aa27.33■■□□□ 1.97
TRAF4-204ENST00000422344 KIAA0825Q8IV33 1275 aa27.33■■□□□ 1.97
TRAF4-204ENST00000422344 PDE8BO95263 885 aa27.32■■□□□ 1.96
TRAF4-204ENST00000422344 GYG1P46976 350 aa27.32■■□□□ 1.96
TRAF4-204ENST00000422344 RFX5P48382 616 aaPredicted RBP27.32■■□□□ 1.96
TRAF4-204ENST00000422344 PTPN12Q05209 780 aaKnown RBP27.31■■□□□ 1.96
TRAF4-204ENST00000422344 ANGEL2Q5VTE6 544 aaKnown RBP27.31■■□□□ 1.96
TRAF4-204ENST00000422344 CDCA5Q96FF9 252 aa27.31■■□□□ 1.96
TRAF4-204ENST00000422344 TNNQ9UQP3 1299 aa27.31■■□□□ 1.96
TRAF4-204ENST00000422344 CAVIN4Q5BKX8 364 aa27.3■■□□□ 1.96
TRAF4-204ENST00000422344 VGLL2Q8N8G2 317 aa27.3■■□□□ 1.96
TRAF4-204ENST00000422344 SASH1O94885 1247 aa27.29■■□□□ 1.96
TRAF4-204ENST00000422344 PUM3Q15397 648 aaKnown RBP27.29■■□□□ 1.96
TRAF4-204ENST00000422344 FTSJ3Q8IY81 847 aaKnown RBP27.29■■□□□ 1.96
TRAF4-204ENST00000422344 FAM84BQ96KN1 310 aaPredicted RBP27.29■■□□□ 1.96
TRAF4-204ENST00000422344 SIL1Q9H173 461 aa27.29■■□□□ 1.96
TRAF4-204ENST00000422344 SAGE1Q9NXZ1 904 aa27.29■■□□□ 1.96
TRAF4-204ENST00000422344 FBXO3Q9UK99 471 aa27.29■■□□□ 1.96
TRAF4-204ENST00000422344 JAG2Q9Y219 1238 aa27.29■■□□□ 1.96
TRAF4-204ENST00000422344 AKAP11Q9UKA4 1901 aa27.28■■□□□ 1.96
TRAF4-204ENST00000422344 TRPA1O75762 1119 aa27.28■■□□□ 1.96
TRAF4-204ENST00000422344 SLC10A3P09131 477 aa27.28■■□□□ 1.96
TRAF4-204ENST00000422344 IFIT1P09914 478 aaKnown RBP27.28■■□□□ 1.96
TRAF4-204ENST00000422344 TDRD7Q8NHU6 1098 aaKnown RBP27.28■■□□□ 1.96
TRAF4-204ENST00000422344 RNF186Q9NXI6 227 aa27.28■■□□□ 1.96
TRAF4-204ENST00000422344 PITPNM2Q9BZ72 1349 aa27.27■■□□□ 1.96
TRAF4-204ENST00000422344 CIAO1O76071 339 aa27.27■■□□□ 1.96
TRAF4-204ENST00000422344 FKBP1AP62942 108 aaKnown RBP27.27■■□□□ 1.96
TRAF4-204ENST00000422344 TMEM57Q8N5G2 664 aa27.27■■□□□ 1.96
TRAF4-204ENST00000422344 F8W031 263 aaPredicted RBP27.26■■□□□ 1.95
TRAF4-204ENST00000422344 FRAT2O75474 233 aaPredicted RBP27.26■■□□□ 1.95
TRAF4-204ENST00000422344 GNAI2P04899 355 aa27.26■■□□□ 1.95
TRAF4-204ENST00000422344 NBPF9Q3BBW0 867 aa27.26■■□□□ 1.95
TRAF4-204ENST00000422344 CERS5Q8N5B7 392 aa27.26■■□□□ 1.95
TRAF4-204ENST00000422344 FAM205AQ6ZU69 1335 aa27.25■■□□□ 1.95
TRAF4-204ENST00000422344 WNT10BO00744 389 aa27.25■■□□□ 1.95
TRAF4-204ENST00000422344 SRGAP3O43295 1099 aa27.25■■□□□ 1.95
TRAF4-204ENST00000422344 SLC34A2O95436 690 aa27.25■■□□□ 1.95
TRAF4-204ENST00000422344 SLC5A1P13866 664 aa27.25■■□□□ 1.95
TRAF4-204ENST00000422344 CSRNP1Q96S65 589 aa27.25■■□□□ 1.95
TRAF4-204ENST00000422344 CEP126Q9P2H0 1117 aa27.25■■□□□ 1.95
TRAF4-204ENST00000422344 DLGAP5Q15398 846 aa27.24■■□□□ 1.95
TRAF4-204ENST00000422344 ATG9AQ7Z3C6 839 aa27.24■■□□□ 1.95
TRAF4-204ENST00000422344 FBXO33Q7Z6M2 555 aa27.24■■□□□ 1.95
TRAF4-204ENST00000422344 DZIP1LQ8IYY4 767 aaKnown RBP27.24■■□□□ 1.95
TRAF4-204ENST00000422344 LPIN2Q92539 896 aa27.24■■□□□ 1.95
TRAF4-204ENST00000422344 IL15P40933 162 aaPredicted RBP27.23■■□□□ 1.95
TRAF4-204ENST00000422344 MFSD14BQ5SR56 506 aa27.23■■□□□ 1.95
TRAF4-204ENST00000422344 COPRSQ9NQ92 184 aa27.23■■□□□ 1.95
TRAF4-204ENST00000422344 PA2G4Q9UQ80 394 aaKnown RBP27.23■■□□□ 1.95
TRAF4-204ENST00000422344 FGFR2P21802 821 aa27.22■■□□□ 1.95
TRAF4-204ENST00000422344 RASAL3Q86YV0 1011 aa27.22■■□□□ 1.95
TRAF4-204ENST00000422344 SCAF8Q9UPN6 1271 aaKnown RBP27.22■■□□□ 1.95
TRAF4-204ENST00000422344 IQSEC3Q9UPP2 1182 aaPredicted RBP27.22■■□□□ 1.95
TRAF4-204ENST00000422344 TNRC18O15417 2968 aaPredicted RBP27.21■■□□□ 1.95
TRAF4-204ENST00000422344 CHAF1AQ13111 956 aaPredicted RBP27.21■■□□□ 1.95
TRAF4-204ENST00000422344 MTX1Q13505 466 aa27.21■■□□□ 1.95
TRAF4-204ENST00000422344 ITPRIPQ8IWB1 547 aa27.21■■□□□ 1.95
TRAF4-204ENST00000422344 BCAMP50895 628 aa27.2■■□□□ 1.94
TRAF4-204ENST00000422344 RBM5P52756 815 aaKnown RBP eCLIP27.2■■□□□ 1.948e-14■■■■□ 26.3
TRAF4-204ENST00000422344 ATP2B3Q16720 1220 aa27.2■■□□□ 1.94
TRAF4-204ENST00000422344 MYO1BO43795 1136 aa27.19■■□□□ 1.94
TRAF4-204ENST00000422344 FKBP1BP68106 108 aa27.19■■□□□ 1.94
TRAF4-204ENST00000422344 CFAP100Q494V2 611 aa27.19■■□□□ 1.94
TRAF4-204ENST00000422344 APOBEC3FQ8IUX4 373 aaKnown RBP27.19■■□□□ 1.94
TRAF4-204ENST00000422344 TBC1D22AQ8WUA7 517 aa27.19■■□□□ 1.94
TRAF4-204ENST00000422344 PAPPA2Q9BXP8 1791 aa27.18■■□□□ 1.94
TRAF4-204ENST00000422344 MOB2Q70IA6 237 aa27.18■■□□□ 1.94
TRAF4-204ENST00000422344 REM2Q8IYK8 340 aaPredicted RBP27.18■■□□□ 1.94
TRAF4-204ENST00000422344 MTMR14Q8NCE2 650 aa27.18■■□□□ 1.94
TRAF4-204ENST00000422344 ZBED3Q96IU2 234 aaPredicted RBP27.18■■□□□ 1.94
TRAF4-204ENST00000422344 TTF2Q9UNY4 1162 aaKnown RBP27.18■■□□□ 1.94
TRAF4-204ENST00000422344 PRAMEF18Q5VWM3 479 aa27.17■■□□□ 1.94
TRAF4-204ENST00000422344 ARAP2Q8WZ64 1704 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms