RNA–Protein interactions for RNA: ENST00000421816.6

GCDH-202, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,109 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-202ENST00000421816 USP50Q70EL3 339 aaPredicted RBP23.85■■□□□ 1.41
GCDH-202ENST00000421816 CERS5Q8N5B7 392 aa23.85■■□□□ 1.41
GCDH-202ENST00000421816 EXOC6Q8TAG9 804 aa23.85■■□□□ 1.41
GCDH-202ENST00000421816 RBM46Q8TBY0 533 aaKnown RBP23.85■■□□□ 1.41
GCDH-202ENST00000421816 NEUROD6Q96NK8 337 aa23.85■■□□□ 1.41
GCDH-202ENST00000421816 IQSEC3Q9UPP2 1182 aaPredicted RBP23.85■■□□□ 1.41
GCDH-202ENST00000421816 H7C1D1 291 aa23.84■■□□□ 1.41
GCDH-202ENST00000421816 RAB11FIP3O75154 756 aa23.84■■□□□ 1.41
GCDH-202ENST00000421816 ZNF280AP59817 542 aaPredicted RBP23.84■■□□□ 1.41
GCDH-202ENST00000421816 CCDC102BQ68D86 513 aa23.84■■□□□ 1.41
GCDH-202ENST00000421816 RHPN1Q8TCX5 695 aa23.84■■□□□ 1.41
GCDH-202ENST00000421816 USP17L8P0C7I0 530 aa23.83■■□□□ 1.41
GCDH-202ENST00000421816 POTEIP0CG38 1075 aa23.83■■□□□ 1.41
GCDH-202ENST00000421816 POTEJP0CG39 1038 aa23.83■■□□□ 1.41
GCDH-202ENST00000421816 GNL3LQ9NVN8 582 aaKnown RBP23.83■■□□□ 1.41
GCDH-202ENST00000421816 JAG2Q9Y219 1238 aa23.83■■□□□ 1.41
GCDH-202ENST00000421816 COL1A1P02452 1464 aaPredicted RBP23.82■■□□□ 1.4
GCDH-202ENST00000421816 SEMA3EO15041 775 aa23.82■■□□□ 1.4
GCDH-202ENST00000421816 FRAT2O75474 233 aaPredicted RBP23.82■■□□□ 1.4
GCDH-202ENST00000421816 MMP14P50281 582 aa23.82■■□□□ 1.4
GCDH-202ENST00000421816 EAPPQ56P03 285 aaPredicted RBP23.82■■□□□ 1.4
GCDH-202ENST00000421816 LDHDQ86WU2 507 aa23.82■■□□□ 1.4
GCDH-202ENST00000421816 EAF2Q96CJ1 260 aaPredicted RBP23.82■■□□□ 1.4
GCDH-202ENST00000421816 KIF1BPQ96EK5 621 aa23.82■■□□□ 1.4
GCDH-202ENST00000421816 DCTPP1Q9H773 170 aa23.82■■□□□ 1.4
GCDH-202ENST00000421816 TRPM4Q8TD43 1214 aa23.81■■□□□ 1.4
GCDH-202ENST00000421816 HIRAP54198 1017 aaPredicted RBP23.8■■□□□ 1.4
GCDH-202ENST00000421816 CHAF1AQ13111 956 aaPredicted RBP23.8■■□□□ 1.4
GCDH-202ENST00000421816 MFSD14BQ5SR56 506 aa23.8■■□□□ 1.4
GCDH-202ENST00000421816 SAMD7Q7Z3H4 446 aa23.8■■□□□ 1.4
GCDH-202ENST00000421816 TBC1D22AQ8WUA7 517 aa23.8■■□□□ 1.4
GCDH-202ENST00000421816 DBNDD2Q9BQY9 259 aa23.8■■□□□ 1.4
GCDH-202ENST00000421816 EGFRP00533 1210 aa23.79■■□□□ 1.4
GCDH-202ENST00000421816 CHADLQ6NUI6 762 aa23.79■■□□□ 1.4
GCDH-202ENST00000421816 KIAA0825Q8IV33 1275 aa23.79■■□□□ 1.4
GCDH-202ENST00000421816 SMC1BQ8NDV3 1235 aa23.79■■□□□ 1.4
GCDH-202ENST00000421816 DENND2AQ9ULE3 1009 aa23.79■■□□□ 1.4
GCDH-202ENST00000421816 PDS5AQ29RF7 1337 aaKnown RBP23.79■■□□□ 1.4
GCDH-202ENST00000421816 APBB1O00213 710 aa23.78■■□□□ 1.4
GCDH-202ENST00000421816 FSTL1Q12841 308 aa23.78■■□□□ 1.4
GCDH-202ENST00000421816 TBC1D10BQ4KMP7 808 aaPredicted RBP23.78■■□□□ 1.4
GCDH-202ENST00000421816 GORABQ5T7V8 394 aa23.78■■□□□ 1.4
GCDH-202ENST00000421816 OGFOD1Q8N543 542 aa23.78■■□□□ 1.4
GCDH-202ENST00000421816 IL1RAPL2Q9NP60 686 aa23.78■■□□□ 1.4
GCDH-202ENST00000421816 MYOZ2Q9NPC6 264 aa23.78■■□□□ 1.4
GCDH-202ENST00000421816 PGAP2Q9UHJ9 254 aa23.78■■□□□ 1.4
GCDH-202ENST00000421816 DBNLQ9UJU6 430 aaKnown RBP23.78■■□□□ 1.4
GCDH-202ENST00000421816 ARID4AP29374 1257 aaPredicted RBP23.77■■□□□ 1.4
GCDH-202ENST00000421816 C1QTNF8P60827 252 aa23.77■■□□□ 1.4
GCDH-202ENST00000421816 IRX6P78412 446 aaPredicted RBP23.77■■□□□ 1.4
GCDH-202ENST00000421816 HDAC1Q13547 482 aaPredicted RBP23.77■■□□□ 1.4
GCDH-202ENST00000421816 RASGRF1Q13972 1273 aa23.77■■□□□ 1.4
GCDH-202ENST00000421816 KIF4BQ2VIQ3 1234 aa23.77■■□□□ 1.4
GCDH-202ENST00000421816 WDR66Q8TBY9 1149 aa23.77■■□□□ 1.4
GCDH-202ENST00000421816 CCDC8Q9H0W5 538 aaPredicted RBP23.77■■□□□ 1.4
GCDH-202ENST00000421816 TLR7Q9NYK1 1049 aaKnown RBP23.77■■□□□ 1.4
GCDH-202ENST00000421816 HDAC9Q9UKV0 1011 aa23.77■■□□□ 1.4
GCDH-202ENST00000421816 AACSQ86V21 672 aa23.76■■□□□ 1.39
GCDH-202ENST00000421816 CLASRPQ8N2M8 674 aaKnown RBP23.76■■□□□ 1.39
GCDH-202ENST00000421816 ZC3H15Q8WU90 426 aaKnown RBP23.76■■□□□ 1.39
GCDH-202ENST00000421816 CLEC11AQ9Y240 323 aa23.76■■□□□ 1.39
GCDH-202ENST00000421816 SALL1Q9NSC2 1324 aa23.76■■□□□ 1.39
GCDH-202ENST00000421816 AKAP11Q9UKA4 1901 aa23.75■■□□□ 1.39
GCDH-202ENST00000421816 UQCRFS1P1P0C7P4 283 aa23.75■■□□□ 1.39
GCDH-202ENST00000421816 GRIK5Q16478 980 aa23.75■■□□□ 1.39
GCDH-202ENST00000421816 CCDC158Q5M9N0 1113 aa23.75■■□□□ 1.39
GCDH-202ENST00000421816 RBM26Q5T8P6 1007 aaKnown RBP23.75■■□□□ 1.39
GCDH-202ENST00000421816 ZNF512BQ96KM6 892 aaPredicted RBP23.75■■□□□ 1.39
GCDH-202ENST00000421816 LRRCC1Q9C099 1032 aa23.75■■□□□ 1.39
GCDH-202ENST00000421816 SUGT1Q9Y2Z0 365 aa23.75■■□□□ 1.39
GCDH-202ENST00000421816 F8W031 263 aaPredicted RBP23.74■■□□□ 1.39
GCDH-202ENST00000421816 HMG20BQ9P0W2 317 aa23.74■■□□□ 1.39
GCDH-202ENST00000421816 SCARF1Q14162 830 aa23.73■■□□□ 1.39
GCDH-202ENST00000421816 TTC39AQ5SRH9 613 aa23.73■■□□□ 1.39
GCDH-202ENST00000421816 MTMR14Q8NCE2 650 aa23.73■■□□□ 1.39
GCDH-202ENST00000421816 ZBED3Q96IU2 234 aaPredicted RBP23.73■■□□□ 1.39
GCDH-202ENST00000421816 TTF2Q9UNY4 1162 aaKnown RBP23.73■■□□□ 1.39
GCDH-202ENST00000421816 MCAMP43121 646 aa23.72■■□□□ 1.39
GCDH-202ENST00000421816 MAP1SQ66K74 1059 aaPredicted RBP23.72■■□□□ 1.39
GCDH-202ENST00000421816 SPATA5Q8NB90 893 aa23.72■■□□□ 1.39
GCDH-202ENST00000421816 ECM29Q5VYK3 1845 aa23.72■■□□□ 1.39
GCDH-202ENST00000421816 SMARCA5O60264 1052 aaPredicted RBP23.71■■□□□ 1.39
GCDH-202ENST00000421816 WNT10BO00744 389 aa23.7■■□□□ 1.38
GCDH-202ENST00000421816 ITGBL1O95965 494 aaPredicted RBP23.7■■□□□ 1.38
GCDH-202ENST00000421816 IFIT2P09913 472 aaKnown RBP23.7■■□□□ 1.38
GCDH-202ENST00000421816 HDLBPQ00341 1268 aaKnown RBP23.7■■□□□ 1.38
GCDH-202ENST00000421816 PI16Q6UXB8 463 aa23.7■■□□□ 1.38
GCDH-202ENST00000421816 CNTROBQ8N137 903 aa23.7■■□□□ 1.38
GCDH-202ENST00000421816 ZGPATQ8N5A5 531 aaKnown RBP23.7■■□□□ 1.38
GCDH-202ENST00000421816 MRIQ9BWK5 157 aa23.7■■□□□ 1.38
GCDH-202ENST00000421816 SERPINA10Q9UK55 444 aa23.7■■□□□ 1.38
GCDH-202ENST00000421816 POLR2AP24928 1970 aaKnown RBP23.7■■□□□ 1.38
GCDH-202ENST00000421816 MAST3O60307 1309 aa23.69■■□□□ 1.38
GCDH-202ENST00000421816 ASTN2O75129 1339 aaPredicted RBP23.69■■□□□ 1.38
GCDH-202ENST00000421816 PRDX5P30044 214 aa23.69■■□□□ 1.38
GCDH-202ENST00000421816 DLGAP5Q15398 846 aa23.69■■□□□ 1.38
GCDH-202ENST00000421816 NBPF9Q3BBW0 867 aa23.69■■□□□ 1.38
GCDH-202ENST00000421816 CFAP100Q494V2 611 aa23.69■■□□□ 1.38
GCDH-202ENST00000421816 GCC1Q96CN9 775 aa23.69■■□□□ 1.38
GCDH-202ENST00000421816 RWDD1Q9H446 243 aaPredicted RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms