RNA–Protein interactions for RNA: ENST00000417833.2

TGFBR3-203, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-203ENST00000417833 LBX1P52954 281 aa16.41■□□□□ 0.22
TGFBR3-203ENST00000417833 CAVIN4Q5BKX8 364 aa16.41■□□□□ 0.22
TGFBR3-203ENST00000417833 MICALL2Q8IY33 904 aa16.41■□□□□ 0.22
TGFBR3-203ENST00000417833 ZC3H15Q8WU90 426 aaKnown RBP16.41■□□□□ 0.22
TGFBR3-203ENST00000417833 PGAP2Q9UHJ9 254 aa16.41■□□□□ 0.22
TGFBR3-203ENST00000417833 SLC5A1P13866 664 aa16.4■□□□□ 0.22
TGFBR3-203ENST00000417833 GYG1P46976 350 aa16.4■□□□□ 0.22
TGFBR3-203ENST00000417833 ZNF280AP59817 542 aaPredicted RBP16.4■□□□□ 0.22
TGFBR3-203ENST00000417833 EAPPQ56P03 285 aaPredicted RBP16.4■□□□□ 0.22
TGFBR3-203ENST00000417833 C20orf194Q5TEA3 1177 aa16.4■□□□□ 0.22
TGFBR3-203ENST00000417833 FAM205AQ6ZU69 1335 aa16.4■□□□□ 0.22
TGFBR3-203ENST00000417833 USP17L8P0C7I0 530 aa16.39■□□□□ 0.21
TGFBR3-203ENST00000417833 VEGFBP49765 207 aa16.39■□□□□ 0.21
TGFBR3-203ENST00000417833 GTF2IP78347 998 aa16.39■□□□□ 0.21
TGFBR3-203ENST00000417833 CEP85Q6P2H3 762 aa16.39■□□□□ 0.21
TGFBR3-203ENST00000417833 RPAP2Q8IXW5 612 aaPredicted RBP16.39■□□□□ 0.21
TGFBR3-203ENST00000417833 C1orf115Q9H7X2 142 aa16.39■□□□□ 0.21
TGFBR3-203ENST00000417833 AKAP2Q9Y2D5 859 aa16.39■□□□□ 0.21
TGFBR3-203ENST00000417833 NOP58Q9Y2X3 529 aaKnown RBP16.39■□□□□ 0.21
TGFBR3-203ENST00000417833 PASKQ96RG2 1323 aa16.39■□□□□ 0.21
TGFBR3-203ENST00000417833 ITGBL1O95965 494 aaPredicted RBP16.38■□□□□ 0.21
TGFBR3-203ENST00000417833 HIRAP54198 1017 aaPredicted RBP16.38■□□□□ 0.21
TGFBR3-203ENST00000417833 RRP1P56182 461 aaKnown RBP16.38■□□□□ 0.21
TGFBR3-203ENST00000417833 G3BP1Q13283 466 aaKnown RBP eCLIP16.38■□□□□ 0.21
TGFBR3-203ENST00000417833 ATP2B3Q16720 1220 aa16.38■□□□□ 0.21
TGFBR3-203ENST00000417833 CLEC11AQ9Y240 323 aa16.38■□□□□ 0.21
TGFBR3-203ENST00000417833 SHTN1A0MZ66 631 aa16.37■□□□□ 0.21
TGFBR3-203ENST00000417833 VPS37DQ86XT2 251 aa16.37■□□□□ 0.21
TGFBR3-203ENST00000417833 TMEM88BA6NKF7 163 aa16.36■□□□□ 0.21
TGFBR3-203ENST00000417833 HSPA8P11142 646 aaKnown RBP16.36■□□□□ 0.21
TGFBR3-203ENST00000417833 BCAMP50895 628 aa16.36■□□□□ 0.21
TGFBR3-203ENST00000417833 TFCP2Q12800 502 aa16.36■□□□□ 0.21
TGFBR3-203ENST00000417833 SAMD7Q7Z3H4 446 aa16.36■□□□□ 0.21
TGFBR3-203ENST00000417833 CNTROBQ8N137 903 aa16.36■□□□□ 0.21
TGFBR3-203ENST00000417833 OGFOD1Q8N543 542 aa16.36■□□□□ 0.21
TGFBR3-203ENST00000417833 TRPM4Q8TD43 1214 aa16.36■□□□□ 0.21
TGFBR3-203ENST00000417833 GPR108Q9NPR9 543 aa16.36■□□□□ 0.21
TGFBR3-203ENST00000417833 ARAP2Q8WZ64 1704 aa16.36■□□□□ 0.21
TGFBR3-203ENST00000417833 PDE4DIPQ5VU43 2346 aa16.35■□□□□ 0.21
TGFBR3-203ENST00000417833 SURF6O75683 361 aaKnown RBP16.35■□□□□ 0.21
TGFBR3-203ENST00000417833 CERS5Q8N5B7 392 aa16.35■□□□□ 0.21
TGFBR3-203ENST00000417833 FBXW7Q969H0 707 aa16.35■□□□□ 0.21
TGFBR3-203ENST00000417833 MXD3Q9BW11 206 aa16.35■□□□□ 0.21
TGFBR3-203ENST00000417833 A0A1B0GUL7 405 aa16.34■□□□□ 0.21
TGFBR3-203ENST00000417833 EGFRP00533 1210 aa16.34■□□□□ 0.21
TGFBR3-203ENST00000417833 MAP2K1Q02750 393 aaPredicted RBP16.34■□□□□ 0.21
TGFBR3-203ENST00000417833 KIF4BQ2VIQ3 1234 aa16.34■□□□□ 0.21
TGFBR3-203ENST00000417833 TBC1D10BQ4KMP7 808 aaPredicted RBP16.34■□□□□ 0.21
TGFBR3-203ENST00000417833 MAP1SQ66K74 1059 aaPredicted RBP16.34■□□□□ 0.21
TGFBR3-203ENST00000417833 MYOZ2Q9NPC6 264 aa16.34■□□□□ 0.21
TGFBR3-203ENST00000417833 HDAC9Q9UKV0 1011 aa16.34■□□□□ 0.21
TGFBR3-203ENST00000417833 CCDC85CA6NKD9 419 aa16.33■□□□□ 0.2
TGFBR3-203ENST00000417833 SEMA3EO15041 775 aa16.33■□□□□ 0.2
TGFBR3-203ENST00000417833 HMMRO75330 724 aa16.33■□□□□ 0.2
TGFBR3-203ENST00000417833 TIMM10P62072 90 aa16.33■□□□□ 0.2
TGFBR3-203ENST00000417833 HSP90AB4PQ58FF6 505 aa16.33■□□□□ 0.2
TGFBR3-203ENST00000417833 SIRT2Q8IXJ6 389 aa16.33■□□□□ 0.2
TGFBR3-203ENST00000417833 MTMR14Q8NCE2 650 aa16.33■□□□□ 0.2
TGFBR3-203ENST00000417833 TBC1D22AQ8WUA7 517 aa16.33■□□□□ 0.2
TGFBR3-203ENST00000417833 GNL3LQ9NVN8 582 aaKnown RBP16.33■□□□□ 0.2
TGFBR3-203ENST00000417833 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.33■□□□□ 0.2
TGFBR3-203ENST00000417833 RASSF10A6NK89 507 aa16.32■□□□□ 0.2
TGFBR3-203ENST00000417833 FRAT2O75474 233 aaPredicted RBP16.32■□□□□ 0.2
TGFBR3-203ENST00000417833 MFSD14BQ5SR56 506 aa16.32■□□□□ 0.2
TGFBR3-203ENST00000417833 RBM26Q5T8P6 1007 aaKnown RBP16.32■□□□□ 0.2
TGFBR3-203ENST00000417833 KIAA0825Q8IV33 1275 aa16.32■□□□□ 0.2
TGFBR3-203ENST00000417833 XAGE2Q96GT9 111 aa16.32■□□□□ 0.2
TGFBR3-203ENST00000417833 SUGT1Q9Y2Z0 365 aa16.32■□□□□ 0.2
TGFBR3-203ENST00000417833 CCDC102BQ68D86 513 aa16.31■□□□□ 0.2
TGFBR3-203ENST00000417833 CDC37L1Q7L3B6 337 aa16.31■□□□□ 0.2
TGFBR3-203ENST00000417833 ERC1Q8IUD2 1116 aa16.31■□□□□ 0.2
TGFBR3-203ENST00000417833 ZBED3Q96IU2 234 aaPredicted RBP16.31■□□□□ 0.2
TGFBR3-203ENST00000417833 MRIQ9BWK5 157 aa16.31■□□□□ 0.2
TGFBR3-203ENST00000417833 PDS5AQ29RF7 1337 aaKnown RBP16.3■□□□□ 0.2
TGFBR3-203ENST00000417833 PITPNM2Q9BZ72 1349 aa16.3■□□□□ 0.2
TGFBR3-203ENST00000417833 MYH13Q9UKX3 1938 aa16.3■□□□□ 0.2
TGFBR3-203ENST00000417833 ADORA1P30542 326 aa16.3■□□□□ 0.2
TGFBR3-203ENST00000417833 PHKA1P46020 1223 aa16.3■□□□□ 0.2
TGFBR3-203ENST00000417833 OS9Q13438 667 aaPredicted RBP16.3■□□□□ 0.2
TGFBR3-203ENST00000417833 SCARF1Q14162 830 aa16.3■□□□□ 0.2
TGFBR3-203ENST00000417833 DEFB115Q30KQ5 88 aa16.3■□□□□ 0.2
TGFBR3-203ENST00000417833 WDR66Q8TBY9 1149 aa16.3■□□□□ 0.2
TGFBR3-203ENST00000417833 DENND2AQ9ULE3 1009 aa16.3■□□□□ 0.2
TGFBR3-203ENST00000417833 IQSEC3Q9UPP2 1182 aaPredicted RBP16.3■□□□□ 0.2
TGFBR3-203ENST00000417833 SALL1Q9NSC2 1324 aa16.29■□□□□ 0.2
TGFBR3-203ENST00000417833 WNT10BO00744 389 aa16.29■□□□□ 0.2
TGFBR3-203ENST00000417833 HDLBPQ00341 1268 aaKnown RBP16.29■□□□□ 0.2
TGFBR3-203ENST00000417833 TNNI3KQ59H18 835 aa16.29■□□□□ 0.2
TGFBR3-203ENST00000417833 DCPSQ96C86 337 aaKnown RBP16.29■□□□□ 0.2
TGFBR3-203ENST00000417833 NEUROD6Q96NK8 337 aa16.29■□□□□ 0.2
TGFBR3-203ENST00000417833 JAG2Q9Y219 1238 aa16.29■□□□□ 0.2
TGFBR3-203ENST00000417833 FPGT-TNNI3KV9GXZ4 949 aa16.29■□□□□ 0.2
TGFBR3-203ENST00000417833 TNRC18O15417 2968 aaPredicted RBP16.29■□□□□ 0.2
TGFBR3-203ENST00000417833 POLR2AP24928 1970 aaKnown RBP16.28■□□□□ 0.2
TGFBR3-203ENST00000417833 RAB11FIP3O75154 756 aa16.28■□□□□ 0.2
TGFBR3-203ENST00000417833 IRX6P78412 446 aaPredicted RBP16.28■□□□□ 0.2
TGFBR3-203ENST00000417833 CHAF1AQ13111 956 aaPredicted RBP16.28■□□□□ 0.2
TGFBR3-203ENST00000417833 AAMPQ13685 434 aa16.28■□□□□ 0.2
TGFBR3-203ENST00000417833 PPP4R2Q9NY27 417 aa16.28■□□□□ 0.2
TGFBR3-203ENST00000417833 SERPINA10Q9UK55 444 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms