RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-208	ENST00000417285	USP44	Q9H0E7	712 aa		31.85	■■■□□ 2.69
VEGFA-208	ENST00000417285	SLC10A3	P09131	477 aa		31.84	■■■□□ 2.69
VEGFA-208	ENST00000417285	CERS5	Q8N5B7	392 aa		31.84	■■■□□ 2.69
VEGFA-208	ENST00000417285	PUS3	Q9BZE2	481 aa	Known RBP	31.84	■■■□□ 2.69
VEGFA-208	ENST00000417285	HIBADH	P31937	336 aa	Known RBP	31.83	■■■□□ 2.69
VEGFA-208	ENST00000417285	ANKRD44	Q8N8A2	993 aa		31.83	■■■□□ 2.69
VEGFA-208	ENST00000417285	SMC4	Q9NTJ3	1288 aa		31.83	■■■□□ 2.69
VEGFA-208	ENST00000417285	TSKS	Q9UJT2	592 aa		31.83	■■■□□ 2.69
VEGFA-208	ENST00000417285	SCAF8	Q9UPN6	1271 aa	Known RBP	31.83	■■■□□ 2.69
VEGFA-208	ENST00000417285	PRAMEF18	Q5VWM3	479 aa		31.82	■■■□□ 2.68
VEGFA-208	ENST00000417285	TDRD7	Q8NHU6	1098 aa	Known RBP	31.81	■■■□□ 2.68
VEGFA-208	ENST00000417285	SAGE1	Q9NXZ1	904 aa		31.81	■■■□□ 2.68
VEGFA-208	ENST00000417285	FAM205A	Q6ZU69	1335 aa		31.8	■■■□□ 2.68
VEGFA-208	ENST00000417285	FAM84B	Q96KN1	310 aa	Predicted RBP	31.8	■■■□□ 2.68
VEGFA-208	ENST00000417285	MYO1B	O43795	1136 aa		31.79	■■■□□ 2.68
VEGFA-208	ENST00000417285	TTLL12	Q14166	644 aa	Predicted RBP	31.79	■■■□□ 2.68
VEGFA-208	ENST00000417285	UBE2Q2L	H0YL09	131 aa		31.78	■■■□□ 2.68
VEGFA-208	ENST00000417285	CSRNP1	Q96S65	589 aa		31.78	■■■□□ 2.68
VEGFA-208	ENST00000417285	ZNF646	O15015	1829 aa	Predicted RBP	31.77	■■■□□ 2.68
VEGFA-208	ENST00000417285	GYG1	P46976	350 aa		31.77	■■■□□ 2.68
VEGFA-208	ENST00000417285	RASAL3	Q86YV0	1011 aa		31.77	■■■□□ 2.68
VEGFA-208	ENST00000417285		F8W031	263 aa	Predicted RBP	31.76	■■■□□ 2.67
VEGFA-208	ENST00000417285	CFAP100	Q494V2	611 aa		31.76	■■■□□ 2.67
VEGFA-208	ENST00000417285	METTL24	Q5JXM2	366 aa		31.76	■■■□□ 2.67
VEGFA-208	ENST00000417285	MOB2	Q70IA6	237 aa		31.76	■■■□□ 2.67
VEGFA-208	ENST00000417285	VPS37D	Q86XT2	251 aa		31.76	■■■□□ 2.67
VEGFA-208	ENST00000417285	DEFB129	Q9H1M3	183 aa		31.76	■■■□□ 2.67
VEGFA-208	ENST00000417285	PDE8B	O95263	885 aa		31.75	■■■□□ 2.67
VEGFA-208	ENST00000417285	LRRC24	Q50LG9	513 aa		31.75	■■■□□ 2.67
VEGFA-208	ENST00000417285	CAVIN4	Q5BKX8	364 aa		31.75	■■■□□ 2.67
VEGFA-208	ENST00000417285	ARMC9	Q7Z3E5	817 aa		31.75	■■■□□ 2.67
VEGFA-208	ENST00000417285	FBXO33	Q7Z6M2	555 aa		31.75	■■■□□ 2.67
VEGFA-208	ENST00000417285	ABHD8	Q96I13	439 aa		31.75	■■■□□ 2.67
VEGFA-208	ENST00000417285	RNF186	Q9NXI6	227 aa		31.75	■■■□□ 2.67
VEGFA-208	ENST00000417285	HDAC5	Q9UQL6	1122 aa		31.75	■■■□□ 2.67
VEGFA-208	ENST00000417285	PPP2R3B	Q9Y5P8	575 aa		31.75	■■■□□ 2.67
VEGFA-208	ENST00000417285	PAPPA2	Q9BXP8	1791 aa		31.75	■■■□□ 2.67
VEGFA-208	ENST00000417285	SPDYE2B	A6NHP3	402 aa		31.74	■■■□□ 2.67
VEGFA-208	ENST00000417285	SPDYE6	P0CI01	402 aa		31.74	■■■□□ 2.67
VEGFA-208	ENST00000417285	MFSD14B	Q5SR56	506 aa		31.74	■■■□□ 2.67
VEGFA-208	ENST00000417285	API5	Q9BZZ5	524 aa	Known RBP	31.74	■■■□□ 2.67
VEGFA-208	ENST00000417285	JAG2	Q9Y219	1238 aa		31.74	■■■□□ 2.67
VEGFA-208	ENST00000417285	DIEXF	Q68CQ4	756 aa	Known RBP	31.73	■■■□□ 2.67
VEGFA-208	ENST00000417285	PRMT6	Q96LA8	375 aa	Predicted RBP	31.73	■■■□□ 2.67
VEGFA-208	ENST00000417285	NOB1	Q9ULX3	412 aa	Known RBP	31.73	■■■□□ 2.67
VEGFA-208	ENST00000417285	TRPA1	O75762	1119 aa		31.72	■■■□□ 2.67
VEGFA-208	ENST00000417285	RBM5	P52756	815 aa	Known RBP eCLIP	31.72	■■■□□ 2.67	1e-9	■□□□□ 9.1
VEGFA-208	ENST00000417285	SERPINA10	Q9UK55	444 aa		31.72	■■■□□ 2.67
VEGFA-208	ENST00000417285		A0A1B0GUL6	1792 aa		31.71	■■■□□ 2.67
VEGFA-208	ENST00000417285	VGLL2	Q8N8G2	317 aa		31.71	■■■□□ 2.67
VEGFA-208	ENST00000417285	COL1A1	P02452	1464 aa	Predicted RBP	31.71	■■■□□ 2.67
VEGFA-208	ENST00000417285	SUPT20HL1	Q3ZLR7	823 aa		31.7	■■■□□ 2.67
VEGFA-208	ENST00000417285	TTF2	Q9UNY4	1162 aa	Known RBP	31.7	■■■□□ 2.67
VEGFA-208	ENST00000417285	UBTFL1	P0CB47	393 aa	Predicted RBP	31.69	■■■□□ 2.66
VEGFA-208	ENST00000417285	LDLRAD1	Q5T700	205 aa		31.69	■■■□□ 2.66
VEGFA-208	ENST00000417285	PPP1R12B	O60237	982 aa	Predicted RBP	31.68	■■■□□ 2.66
VEGFA-208	ENST00000417285	FRAT2	O75474	233 aa	Predicted RBP	31.68	■■■□□ 2.66
VEGFA-208	ENST00000417285	PTPN12	Q05209	780 aa	Known RBP	31.68	■■■□□ 2.66
VEGFA-208	ENST00000417285	MIER1	Q8N108	512 aa		31.68	■■■□□ 2.66
VEGFA-208	ENST00000417285	KLHDC4	Q8TBB5	520 aa		31.68	■■■□□ 2.66
VEGFA-208	ENST00000417285	TBC1D22A	Q8WUA7	517 aa		31.68	■■■□□ 2.66
VEGFA-208	ENST00000417285	PCDHAC2	Q9Y5I4	1007 aa		31.68	■■■□□ 2.66
VEGFA-208	ENST00000417285	EYA2	O00167	538 aa		31.67	■■■□□ 2.66
VEGFA-208	ENST00000417285	PUM3	Q15397	648 aa	Known RBP	31.67	■■■□□ 2.66
VEGFA-208	ENST00000417285	ARHGAP45	Q92619	1136 aa		31.67	■■■□□ 2.66
VEGFA-208	ENST00000417285	FBXO3	Q9UK99	471 aa		31.67	■■■□□ 2.66
VEGFA-208	ENST00000417285	ANGEL1	Q9UNK9	670 aa	Known RBP	31.67	■■■□□ 2.66
VEGFA-208	ENST00000417285	KIF16B	Q96L93	1317 aa		31.67	■■■□□ 2.66
VEGFA-208	ENST00000417285	CLRN2	A0PK11	232 aa		31.66	■■■□□ 2.66
VEGFA-208	ENST00000417285	UNCX	A6NJT0	531 aa		31.66	■■■□□ 2.66
VEGFA-208	ENST00000417285	IFIT1	P09914	478 aa	Known RBP	31.66	■■■□□ 2.66
VEGFA-208	ENST00000417285	RFX5	P48382	616 aa	Predicted RBP	31.66	■■■□□ 2.66
VEGFA-208	ENST00000417285	RARS	P54136	660 aa	Known RBP	31.66	■■■□□ 2.66
VEGFA-208	ENST00000417285	PRKG1	Q13976	671 aa		31.66	■■■□□ 2.66
VEGFA-208	ENST00000417285	VEZT	Q9HBM0	779 aa		31.66	■■■□□ 2.66
VEGFA-208	ENST00000417285	TM4SF4	P48230	202 aa		31.65	■■■□□ 2.66
VEGFA-208	ENST00000417285	TNFAIP1	Q13829	316 aa		31.65	■■■□□ 2.66
VEGFA-208	ENST00000417285	MAP3K11	Q16584	847 aa		31.65	■■■□□ 2.66
VEGFA-208	ENST00000417285	HDLBP	Q00341	1268 aa	Known RBP	31.64	■■■□□ 2.66
VEGFA-208	ENST00000417285	MCOLN1	Q9GZU1	580 aa		31.64	■■■□□ 2.66
VEGFA-208	ENST00000417285	FGFR2	P21802	821 aa		31.63	■■■□□ 2.65
VEGFA-208	ENST00000417285	BCAM	P50895	628 aa		31.63	■■■□□ 2.65
VEGFA-208	ENST00000417285	DZIP1L	Q8IYY4	767 aa	Known RBP	31.63	■■■□□ 2.65
VEGFA-208	ENST00000417285	SLC10A4	Q96EP9	437 aa		31.63	■■■□□ 2.65
VEGFA-208	ENST00000417285	MRI	Q9BWK5	157 aa		31.63	■■■□□ 2.65
VEGFA-208	ENST00000417285	ZNF70	Q9UC06	446 aa	Predicted RBP	31.63	■■■□□ 2.65
VEGFA-208	ENST00000417285	CHAF1A	Q13111	956 aa	Predicted RBP	31.62	■■■□□ 2.65
VEGFA-208	ENST00000417285	DGKZ	Q13574	1117 aa		31.62	■■■□□ 2.65
VEGFA-208	ENST00000417285	RASA3	Q14644	834 aa		31.62	■■■□□ 2.65
VEGFA-208	ENST00000417285	SPDYE2	Q495Y8	402 aa		31.62	■■■□□ 2.65
VEGFA-208	ENST00000417285	LPIN2	Q92539	896 aa		31.62	■■■□□ 2.65
VEGFA-208	ENST00000417285	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	31.62	■■■□□ 2.65
VEGFA-208	ENST00000417285	CRK	P46108	304 aa		31.61	■■■□□ 2.65
VEGFA-208	ENST00000417285	SREBF2	Q12772	1141 aa		31.61	■■■□□ 2.65
VEGFA-208	ENST00000417285	SUGT1	Q9Y2Z0	365 aa		31.61	■■■□□ 2.65
VEGFA-208	ENST00000417285	CASP8AP2	Q9UKL3	1982 aa		31.61	■■■□□ 2.65
VEGFA-208	ENST00000417285	CIAO1	O76071	339 aa		31.6	■■■□□ 2.65
VEGFA-208	ENST00000417285	SLC5A1	P13866	664 aa		31.6	■■■□□ 2.65
VEGFA-208	ENST00000417285	ATG9A	Q7Z3C6	839 aa		31.6	■■■□□ 2.65
VEGFA-208	ENST00000417285	TDRD3	Q9H7E2	651 aa	Known RBP	31.6	■■■□□ 2.65

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