RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 RGS19P49795 217 aa18.26■□□□□ 0.51
PAF1-202ENST00000416728 PRKG1Q13976 671 aa18.26■□□□□ 0.51
PAF1-202ENST00000416728 F8W031 263 aaPredicted RBP18.25■□□□□ 0.51
PAF1-202ENST00000416728 MTMR14Q8NCE2 650 aa18.25■□□□□ 0.51
PAF1-202ENST00000416728 COL1A1P02452 1464 aaPredicted RBP18.24■□□□□ 0.51
PAF1-202ENST00000416728 MYO1BO43795 1136 aa18.24■□□□□ 0.51
PAF1-202ENST00000416728 FKBP1AP62942 108 aaKnown RBP18.24■□□□□ 0.51
PAF1-202ENST00000416728 PTPN12Q05209 780 aaKnown RBP18.24■□□□□ 0.51
PAF1-202ENST00000416728 DEFB129Q9H1M3 183 aa18.24■□□□□ 0.51
PAF1-202ENST00000416728 MKRN3Q13064 507 aaKnown RBP18.23■□□□□ 0.51
PAF1-202ENST00000416728 CFAP100Q494V2 611 aa18.23■□□□□ 0.51
PAF1-202ENST00000416728 CTU1Q7Z7A3 348 aaKnown RBP18.23■□□□□ 0.51
PAF1-202ENST00000416728 SUCLG2Q96I99 432 aa18.23■□□□□ 0.51
PAF1-202ENST00000416728 ANGEL1Q9UNK9 670 aaKnown RBP18.23■□□□□ 0.51
PAF1-202ENST00000416728 JAG2Q9Y219 1238 aa18.23■□□□□ 0.51
PAF1-202ENST00000416728 SPDYE2BA6NHP3 402 aa18.22■□□□□ 0.51
PAF1-202ENST00000416728 SPDYE6P0CI01 402 aa18.22■□□□□ 0.51
PAF1-202ENST00000416728 TM4SF4P48230 202 aa18.22■□□□□ 0.51
PAF1-202ENST00000416728 SREBF2Q12772 1141 aa18.22■□□□□ 0.51
PAF1-202ENST00000416728 PCDHAC2Q9Y5I4 1007 aa18.22■□□□□ 0.51
PAF1-202ENST00000416728 PPP2R3BQ9Y5P8 575 aa18.22■□□□□ 0.51
PAF1-202ENST00000416728 ZNF521Q96K83 1311 aa18.22■□□□□ 0.51
PAF1-202ENST00000416728 CLRN2A0PK11 232 aa18.21■□□□□ 0.51
PAF1-202ENST00000416728 NBPF7P0C2Y1 421 aaPredicted RBP18.21■□□□□ 0.51
PAF1-202ENST00000416728 UBE4AQ14139 1066 aa18.21■□□□□ 0.51
PAF1-202ENST00000416728 LDLRAD1Q5T700 205 aa18.21■□□□□ 0.51
PAF1-202ENST00000416728 AKAP11Q9UKA4 1901 aa18.21■□□□□ 0.51
PAF1-202ENST00000416728 TBC1D8O95759 1140 aa18.2■□□□□ 0.5
PAF1-202ENST00000416728 RBM5P52756 815 aaKnown RBP eCLIP18.2■□□□□ 0.5
PAF1-202ENST00000416728 KAZALD1Q96I82 304 aa18.2■□□□□ 0.5
PAF1-202ENST00000416728 PRMT6Q96LA8 375 aaPredicted RBP18.2■□□□□ 0.5
PAF1-202ENST00000416728 VEZTQ9HBM0 779 aa18.2■□□□□ 0.5
PAF1-202ENST00000416728 UTYO14607 1347 aa18.19■□□□□ 0.5
PAF1-202ENST00000416728 FAM205AQ6ZU69 1335 aa18.19■□□□□ 0.5
PAF1-202ENST00000416728 PPP1R12BO60237 982 aaPredicted RBP18.19■□□□□ 0.5
PAF1-202ENST00000416728 HIBADHP31937 336 aaKnown RBP18.19■□□□□ 0.5
PAF1-202ENST00000416728 GYG1P46976 350 aa18.19■□□□□ 0.5
PAF1-202ENST00000416728 MFSD14BQ5SR56 506 aa18.19■□□□□ 0.5
PAF1-202ENST00000416728 SPRYD7Q5W111 196 aa18.19■□□□□ 0.5
PAF1-202ENST00000416728 TDRD7Q8NHU6 1098 aaKnown RBP18.19■□□□□ 0.5
PAF1-202ENST00000416728 ZNF296Q8WUU4 475 aaPredicted RBP18.19■□□□□ 0.5
PAF1-202ENST00000416728 PUS3Q9BZE2 481 aaKnown RBP18.19■□□□□ 0.5
PAF1-202ENST00000416728 FZD1Q9UP38 647 aa18.19■□□□□ 0.5
PAF1-202ENST00000416728 MROH5Q6ZUA9 1318 aa18.18■□□□□ 0.5
PAF1-202ENST00000416728 MAP3K11Q16584 847 aa18.18■□□□□ 0.5
PAF1-202ENST00000416728 SUPT20HL1Q3ZLR7 823 aa18.18■□□□□ 0.5
PAF1-202ENST00000416728 MRPL50Q8N5N7 158 aaKnown RBP18.18■□□□□ 0.5
PAF1-202ENST00000416728 BICC1Q9H694 974 aaKnown RBP18.18■□□□□ 0.5
PAF1-202ENST00000416728 A0A1B0GUL6 1792 aa18.18■□□□□ 0.5
PAF1-202ENST00000416728 PTPRCP08575 1304 aa18.18■□□□□ 0.5
PAF1-202ENST00000416728 RABL6Q3YEC7 729 aaPredicted RBP18.17■□□□□ 0.5
PAF1-202ENST00000416728 SLC10A4Q96EP9 437 aa18.17■□□□□ 0.5
PAF1-202ENST00000416728 FAM84BQ96KN1 310 aaPredicted RBP18.17■□□□□ 0.5
PAF1-202ENST00000416728 RIPOR2Q9Y4F9 1068 aa18.17■□□□□ 0.5
PAF1-202ENST00000416728 SSC5DA1L4H1 1573 aa18.17■□□□□ 0.5
PAF1-202ENST00000416728 E9PSI1 815 aa18.17■□□□□ 0.5
PAF1-202ENST00000416728 GPR25O00155 361 aa18.17■□□□□ 0.5
PAF1-202ENST00000416728 PKN2Q16513 984 aaKnown RBP18.17■□□□□ 0.5
PAF1-202ENST00000416728 NOM1Q5C9Z4 860 aaKnown RBP18.17■□□□□ 0.5
PAF1-202ENST00000416728 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.17■□□□□ 0.5
PAF1-202ENST00000416728 TTF2Q9UNY4 1162 aaKnown RBP18.17■□□□□ 0.5
PAF1-202ENST00000416728 AOX1Q06278 1338 aa18.16■□□□□ 0.5
PAF1-202ENST00000416728 MANSC4A6NHS7 340 aaPredicted RBP18.16■□□□□ 0.5
PAF1-202ENST00000416728 SOX10P56693 466 aa18.16■□□□□ 0.5
PAF1-202ENST00000416728 TNFAIP1Q13829 316 aa18.16■□□□□ 0.5
PAF1-202ENST00000416728 RASA3Q14644 834 aa18.16■□□□□ 0.5
PAF1-202ENST00000416728 METTL24Q5JXM2 366 aa18.16■□□□□ 0.5
PAF1-202ENST00000416728 NBPF12Q5TAG4 269 aaPredicted RBP18.16■□□□□ 0.5
PAF1-202ENST00000416728 VPS37DQ86XT2 251 aa18.16■□□□□ 0.5
PAF1-202ENST00000416728 CLMNQ96JQ2 1002 aa18.16■□□□□ 0.5
PAF1-202ENST00000416728 CFHR5Q9BXR6 569 aa18.16■□□□□ 0.5
PAF1-202ENST00000416728 SERPINA10Q9UK55 444 aa18.16■□□□□ 0.5
PAF1-202ENST00000416728 UNCXA6NJT0 531 aa18.15■□□□□ 0.5
PAF1-202ENST00000416728 ALDH1A1P00352 501 aa18.15■□□□□ 0.5
PAF1-202ENST00000416728 ZBTB48P10074 688 aaPredicted RBP18.15■□□□□ 0.5
PAF1-202ENST00000416728 INHBEP58166 350 aa18.15■□□□□ 0.5
PAF1-202ENST00000416728 LRRC24Q50LG9 513 aa18.15■□□□□ 0.5
PAF1-202ENST00000416728 ANKRD44Q8N8A2 993 aa18.15■□□□□ 0.5
PAF1-202ENST00000416728 IREB2P48200 963 aaKnown RBP18.14■□□□□ 0.49
PAF1-202ENST00000416728 SPDYE2Q495Y8 402 aa18.14■□□□□ 0.49
PAF1-202ENST00000416728 CAVIN4Q5BKX8 364 aa18.14■□□□□ 0.49
PAF1-202ENST00000416728 SSH1Q8WYL5 1049 aa18.14■□□□□ 0.49
PAF1-202ENST00000416728 WNK4Q96J92 1243 aa18.14■□□□□ 0.49
PAF1-202ENST00000416728 ZNF70Q9UC06 446 aaPredicted RBP18.14■□□□□ 0.49
PAF1-202ENST00000416728 HPS5Q9UPZ3 1129 aa18.14■□□□□ 0.49
PAF1-202ENST00000416728 FKTNO75072 461 aa18.13■□□□□ 0.49
PAF1-202ENST00000416728 FRAT2O75474 233 aaPredicted RBP18.13■□□□□ 0.49
PAF1-202ENST00000416728 FBXO33Q7Z6M2 555 aa18.13■□□□□ 0.49
PAF1-202ENST00000416728 DZIP1LQ8IYY4 767 aaKnown RBP18.13■□□□□ 0.49
PAF1-202ENST00000416728 TDRD3Q9H7E2 651 aaKnown RBP18.13■□□□□ 0.49
PAF1-202ENST00000416728 IQSEC3Q9UPP2 1182 aaPredicted RBP18.13■□□□□ 0.49
PAF1-202ENST00000416728 PDE8BO95263 885 aa18.12■□□□□ 0.49
PAF1-202ENST00000416728 CRKP46108 304 aa18.12■□□□□ 0.49
PAF1-202ENST00000416728 CHAF1AQ13111 956 aaPredicted RBP18.12■□□□□ 0.49
PAF1-202ENST00000416728 IFNL1Q8IU54 200 aa18.12■□□□□ 0.49
PAF1-202ENST00000416728 ANKRD13AQ8IZ07 590 aa18.12■□□□□ 0.49
PAF1-202ENST00000416728 R3HDMLQ9H3Y0 253 aa18.12■□□□□ 0.49
PAF1-202ENST00000416728 USP2O75604 605 aaPredicted RBP18.11■□□□□ 0.49
PAF1-202ENST00000416728 SLFN5Q08AF3 891 aa18.11■□□□□ 0.49
PAF1-202ENST00000416728 VGLL2Q8N8G2 317 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms