RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 NF2P35240 595 aa22.11■■□□□ 1.13
PDLIM2-208ENST00000416159 DLGAP5Q15398 846 aa22.11■■□□□ 1.13
PDLIM2-208ENST00000416159 APOBEC3FQ8IUX4 373 aaKnown RBP22.11■■□□□ 1.13
PDLIM2-208ENST00000416159 CERS5Q8N5B7 392 aa22.11■■□□□ 1.13
PDLIM2-208ENST00000416159 ANKRD44Q8N8A2 993 aa22.11■■□□□ 1.13
PDLIM2-208ENST00000416159 SLC10A3P09131 477 aa22.1■■□□□ 1.13
PDLIM2-208ENST00000416159 HIBADHP31937 336 aaKnown RBP22.1■■□□□ 1.13
PDLIM2-208ENST00000416159 KIF23Q02241 960 aaPredicted RBP22.1■■□□□ 1.13
PDLIM2-208ENST00000416159 PRAMEF18Q5VWM3 479 aa22.1■■□□□ 1.13
PDLIM2-208ENST00000416159 MTMR14Q8NCE2 650 aa22.1■■□□□ 1.13
PDLIM2-208ENST00000416159 TSKSQ9UJT2 592 aa22.1■■□□□ 1.13
PDLIM2-208ENST00000416159 PAPPA2Q9BXP8 1791 aa22.1■■□□□ 1.13
PDLIM2-208ENST00000416159 TDRD7Q8NHU6 1098 aaKnown RBP22.09■■□□□ 1.13
PDLIM2-208ENST00000416159 FAM205AQ6ZU69 1335 aa22.08■■□□□ 1.13
PDLIM2-208ENST00000416159 REM2Q8IYK8 340 aaPredicted RBP22.08■■□□□ 1.13
PDLIM2-208ENST00000416159 FAM84BQ96KN1 310 aaPredicted RBP22.08■■□□□ 1.13
PDLIM2-208ENST00000416159 F8W031 263 aaPredicted RBP22.07■■□□□ 1.12
PDLIM2-208ENST00000416159 GYG1P46976 350 aa22.07■■□□□ 1.12
PDLIM2-208ENST00000416159 TTLL12Q14166 644 aaPredicted RBP22.07■■□□□ 1.12
PDLIM2-208ENST00000416159 LRRC24Q50LG9 513 aa22.07■■□□□ 1.12
PDLIM2-208ENST00000416159 METTL24Q5JXM2 366 aa22.07■■□□□ 1.12
PDLIM2-208ENST00000416159 UBE2Q2LH0YL09 131 aa22.06■■□□□ 1.12
PDLIM2-208ENST00000416159 CFAP100Q494V2 611 aa22.06■■□□□ 1.12
PDLIM2-208ENST00000416159 RASAL3Q86YV0 1011 aa22.06■■□□□ 1.12
PDLIM2-208ENST00000416159 JAG2Q9Y219 1238 aa22.06■■□□□ 1.12
PDLIM2-208ENST00000416159 MYO1BO43795 1136 aa22.05■■□□□ 1.12
PDLIM2-208ENST00000416159 MOB2Q70IA6 237 aa22.05■■□□□ 1.12
PDLIM2-208ENST00000416159 ARMC9Q7Z3E5 817 aa22.05■■□□□ 1.12
PDLIM2-208ENST00000416159 CSRNP1Q96S65 589 aa22.05■■□□□ 1.12
PDLIM2-208ENST00000416159 API5Q9BZZ5 524 aaKnown RBP22.05■■□□□ 1.12
PDLIM2-208ENST00000416159 SAGE1Q9NXZ1 904 aa22.05■■□□□ 1.12
PDLIM2-208ENST00000416159 NOB1Q9ULX3 412 aaKnown RBP22.05■■□□□ 1.12
PDLIM2-208ENST00000416159 PDE8BO95263 885 aa22.04■■□□□ 1.12
PDLIM2-208ENST00000416159 MFSD14BQ5SR56 506 aa22.04■■□□□ 1.12
PDLIM2-208ENST00000416159 FBXO33Q7Z6M2 555 aa22.04■■□□□ 1.12
PDLIM2-208ENST00000416159 VPS37DQ86XT2 251 aa22.04■■□□□ 1.12
PDLIM2-208ENST00000416159 COL1A1P02452 1464 aaPredicted RBP22.03■■□□□ 1.12
PDLIM2-208ENST00000416159 CASP8AP2Q9UKL3 1982 aa22.03■■□□□ 1.12
PDLIM2-208ENST00000416159 SPDYE2BA6NHP3 402 aa22.03■■□□□ 1.12
PDLIM2-208ENST00000416159 SPDYE6P0CI01 402 aa22.03■■□□□ 1.12
PDLIM2-208ENST00000416159 CAVIN4Q5BKX8 364 aa22.03■■□□□ 1.12
PDLIM2-208ENST00000416159 VGLL2Q8N8G2 317 aa22.03■■□□□ 1.12
PDLIM2-208ENST00000416159 DEFB129Q9H1M3 183 aa22.03■■□□□ 1.12
PDLIM2-208ENST00000416159 HDAC5Q9UQL6 1122 aa22.03■■□□□ 1.12
PDLIM2-208ENST00000416159 PPP2R3BQ9Y5P8 575 aa22.03■■□□□ 1.12
PDLIM2-208ENST00000416159 AKAP11Q9UKA4 1901 aa22.03■■□□□ 1.12
PDLIM2-208ENST00000416159 UBTFL1P0CB47 393 aaPredicted RBP22.02■■□□□ 1.12
PDLIM2-208ENST00000416159 RBM5P52756 815 aaKnown RBP eCLIP22.02■■□□□ 1.12
PDLIM2-208ENST00000416159 KLHDC4Q8TBB5 520 aa22.02■■□□□ 1.12
PDLIM2-208ENST00000416159 ABHD8Q96I13 439 aa22.02■■□□□ 1.12
PDLIM2-208ENST00000416159 PRMT6Q96LA8 375 aaPredicted RBP22.02■■□□□ 1.12
PDLIM2-208ENST00000416159 RNF186Q9NXI6 227 aa22.02■■□□□ 1.12
PDLIM2-208ENST00000416159 PCDHAC2Q9Y5I4 1007 aa22.02■■□□□ 1.12
PDLIM2-208ENST00000416159 RFX5P48382 616 aaPredicted RBP22.01■■□□□ 1.11
PDLIM2-208ENST00000416159 RARSP54136 660 aaKnown RBP22.01■■□□□ 1.11
PDLIM2-208ENST00000416159 TTF2Q9UNY4 1162 aaKnown RBP22.01■■□□□ 1.11
PDLIM2-208ENST00000416159 ECM29Q5VYK3 1845 aa22.01■■□□□ 1.11
PDLIM2-208ENST00000416159 EYA2O00167 538 aa22■■□□□ 1.11
PDLIM2-208ENST00000416159 FRAT2O75474 233 aaPredicted RBP22■■□□□ 1.11
PDLIM2-208ENST00000416159 TRPA1O75762 1119 aa22■■□□□ 1.11
PDLIM2-208ENST00000416159 IFIT1P09914 478 aaKnown RBP22■■□□□ 1.11
PDLIM2-208ENST00000416159 SERPINA10Q9UK55 444 aa22■■□□□ 1.11
PDLIM2-208ENST00000416159 CLRN2A0PK11 232 aa21.99■■□□□ 1.11
PDLIM2-208ENST00000416159 PTPN12Q05209 780 aaKnown RBP21.99■■□□□ 1.11
PDLIM2-208ENST00000416159 PRKG1Q13976 671 aa21.99■■□□□ 1.11
PDLIM2-208ENST00000416159 PUM3Q15397 648 aaKnown RBP21.99■■□□□ 1.11
PDLIM2-208ENST00000416159 TBC1D22AQ8WUA7 517 aa21.99■■□□□ 1.11
PDLIM2-208ENST00000416159 ARHGAP45Q92619 1136 aa21.99■■□□□ 1.11
PDLIM2-208ENST00000416159 VEZTQ9HBM0 779 aa21.99■■□□□ 1.11
PDLIM2-208ENST00000416159 FBXO3Q9UK99 471 aa21.99■■□□□ 1.11
PDLIM2-208ENST00000416159 ANGEL1Q9UNK9 670 aaKnown RBP21.99■■□□□ 1.11
PDLIM2-208ENST00000416159 PPP1R12BO60237 982 aaPredicted RBP21.98■■□□□ 1.11
PDLIM2-208ENST00000416159 FGFR2P21802 821 aa21.98■■□□□ 1.11
PDLIM2-208ENST00000416159 SUPT20HL1Q3ZLR7 823 aa21.98■■□□□ 1.11
PDLIM2-208ENST00000416159 LDLRAD1Q5T700 205 aa21.98■■□□□ 1.11
PDLIM2-208ENST00000416159 IQSEC3Q9UPP2 1182 aaPredicted RBP21.98■■□□□ 1.11
PDLIM2-208ENST00000416159 KIF16BQ96L93 1317 aa21.98■■□□□ 1.11
PDLIM2-208ENST00000416159 BCAMP50895 628 aa21.97■■□□□ 1.11
PDLIM2-208ENST00000416159 CHAF1AQ13111 956 aaPredicted RBP21.97■■□□□ 1.11
PDLIM2-208ENST00000416159 MAP3K11Q16584 847 aa21.97■■□□□ 1.11
PDLIM2-208ENST00000416159 TNFAIP1Q13829 316 aa21.96■■□□□ 1.11
PDLIM2-208ENST00000416159 SPDYE2Q495Y8 402 aa21.96■■□□□ 1.11
PDLIM2-208ENST00000416159 LPIN2Q92539 896 aa21.96■■□□□ 1.11
PDLIM2-208ENST00000416159 ZNF70Q9UC06 446 aaPredicted RBP21.96■■□□□ 1.11
PDLIM2-208ENST00000416159 SLC5A1P13866 664 aa21.95■■□□□ 1.1
PDLIM2-208ENST00000416159 CRKP46108 304 aa21.95■■□□□ 1.1
PDLIM2-208ENST00000416159 TM4SF4P48230 202 aa21.95■■□□□ 1.1
PDLIM2-208ENST00000416159 HDLBPQ00341 1268 aaKnown RBP21.95■■□□□ 1.1
PDLIM2-208ENST00000416159 ATG9AQ7Z3C6 839 aa21.95■■□□□ 1.1
PDLIM2-208ENST00000416159 DZIP1LQ8IYY4 767 aaKnown RBP21.95■■□□□ 1.1
PDLIM2-208ENST00000416159 MCOLN1Q9GZU1 580 aa21.95■■□□□ 1.1
PDLIM2-208ENST00000416159 TDRD3Q9H7E2 651 aaKnown RBP21.95■■□□□ 1.1
PDLIM2-208ENST00000416159 LRRFIP2Q9Y608 721 aaKnown RBP21.95■■□□□ 1.1
PDLIM2-208ENST00000416159 AOX1Q06278 1338 aa21.95■■□□□ 1.1
PDLIM2-208ENST00000416159 UNCXA6NJT0 531 aa21.94■■□□□ 1.1
PDLIM2-208ENST00000416159 CIAO1O76071 339 aa21.94■■□□□ 1.1
PDLIM2-208ENST00000416159 DGKZQ13574 1117 aa21.94■■□□□ 1.1
PDLIM2-208ENST00000416159 RASA3Q14644 834 aa21.94■■□□□ 1.1
PDLIM2-208ENST00000416159 INTS3Q68E01 1043 aaKnown RBP21.94■■□□□ 1.1
PDLIM2-208ENST00000416159 SLC10A4Q96EP9 437 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms