RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 METTL24Q5JXM2 366 aa8.04□□□□□ -1.12
HDAC8-211ENST00000415409 GORABQ5T7V8 394 aa8.04□□□□□ -1.12
HDAC8-211ENST00000415409 USPL1Q5W0Q7 1092 aa8.04□□□□□ -1.12
HDAC8-211ENST00000415409 LDHAL6AQ6ZMR3 332 aa8.04□□□□□ -1.12
HDAC8-211ENST00000415409 NEUROD6Q96NK8 337 aa8.04□□□□□ -1.12
HDAC8-211ENST00000415409 SETDB2Q96T68 719 aa8.04□□□□□ -1.12
HDAC8-211ENST00000415409 USP26Q9BXU7 913 aa8.04□□□□□ -1.12
HDAC8-211ENST00000415409 GREM2Q9H772 168 aa8.04□□□□□ -1.12
HDAC8-211ENST00000415409 CNNM1Q9NRU3 951 aa8.04□□□□□ -1.12
HDAC8-211ENST00000415409 DIAPH3Q9NSV4 1193 aa8.04□□□□□ -1.12
HDAC8-211ENST00000415409 TLR7Q9NYK1 1049 aaKnown RBP8.04□□□□□ -1.12
HDAC8-211ENST00000415409 PNMA3Q9UL41 463 aa8.04□□□□□ -1.12
HDAC8-211ENST00000415409 BAG6P46379 1132 aa8.03□□□□□ -1.12
HDAC8-211ENST00000415409 CCDC158Q5M9N0 1113 aa8.03□□□□□ -1.12
HDAC8-211ENST00000415409 BICDL1Q6ZP65 573 aa8.03□□□□□ -1.12
HDAC8-211ENST00000415409 KIAA1211Q6ZU35 1233 aa8.03□□□□□ -1.12
HDAC8-211ENST00000415409 SAMD7Q7Z3H4 446 aa8.03□□□□□ -1.12
HDAC8-211ENST00000415409 ARHGEF1Q92888 912 aaKnown RBP8.03□□□□□ -1.12
HDAC8-211ENST00000415409 DBNDD2Q9BQY9 259 aa8.03□□□□□ -1.12
HDAC8-211ENST00000415409 PUS3Q9BZE2 481 aaKnown RBP8.03□□□□□ -1.12
HDAC8-211ENST00000415409 BOLA2Q9H3K6 86 aa8.03□□□□□ -1.12
HDAC8-211ENST00000415409 DBNLQ9UJU6 430 aaKnown RBP8.03□□□□□ -1.12
HDAC8-211ENST00000415409 ARFGEF2Q9Y6D5 1785 aa8.02□□□□□ -1.13
HDAC8-211ENST00000415409 ITGB4P16144 1822 aa8.02□□□□□ -1.13
HDAC8-211ENST00000415409 A0A1B0GUL7 405 aa8.02□□□□□ -1.13
HDAC8-211ENST00000415409 IGHMBP2P38935 993 aaKnown RBP8.02□□□□□ -1.13
HDAC8-211ENST00000415409 TIMM10P62072 90 aa8.02□□□□□ -1.13
HDAC8-211ENST00000415409 ATP2B3Q16720 1220 aa8.02□□□□□ -1.13
HDAC8-211ENST00000415409 TBC1D9BQ66K14 1250 aa8.02□□□□□ -1.13
HDAC8-211ENST00000415409 TPTE2Q6XPS3 522 aa8.02□□□□□ -1.13
HDAC8-211ENST00000415409 NBPF5PQ86XG9 351 aaPredicted RBP8.02□□□□□ -1.13
HDAC8-211ENST00000415409 TICAM2Q86XR7 235 aa8.02□□□□□ -1.13
HDAC8-211ENST00000415409 HSCBQ8IWL3 235 aa8.02□□□□□ -1.13
HDAC8-211ENST00000415409 CDC5LQ99459 802 aaKnown RBP8.02□□□□□ -1.13
HDAC8-211ENST00000415409 MPHOSPH8Q99549 860 aa8.02□□□□□ -1.13
HDAC8-211ENST00000415409 FSD1Q9BTV5 496 aa8.02□□□□□ -1.13
HDAC8-211ENST00000415409 ANO2Q9NQ90 1003 aa8.02□□□□□ -1.13
HDAC8-211ENST00000415409 SRP68Q9UHB9 627 aaKnown RBP8.02□□□□□ -1.13
HDAC8-211ENST00000415409 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.02□□□□□ -1.13
HDAC8-211ENST00000415409 TJP1Q07157 1748 aa8.02□□□□□ -1.13
HDAC8-211ENST00000415409 KAT6BQ8WYB5 2073 aa8.02□□□□□ -1.13
HDAC8-211ENST00000415409 RGPD3A6NKT7 1758 aaPredicted RBP8.02□□□□□ -1.13
HDAC8-211ENST00000415409 RGPD4Q7Z3J3 1758 aa8.02□□□□□ -1.13
HDAC8-211ENST00000415409 MROH5Q6ZUA9 1318 aa8.02□□□□□ -1.13
HDAC8-211ENST00000415409 RREB1Q92766 1687 aa8.02□□□□□ -1.13
HDAC8-211ENST00000415409 RTL9Q8NET4 1388 aa8.01□□□□□ -1.13
HDAC8-211ENST00000415409 CICQ96RK0 1608 aaPredicted RBP8.01□□□□□ -1.13
HDAC8-211ENST00000415409 NPHP1O15259 732 aa8.01□□□□□ -1.13
HDAC8-211ENST00000415409 SGSM2O43147 1006 aa8.01□□□□□ -1.13
HDAC8-211ENST00000415409 SSFA2P28290 1259 aa8.01□□□□□ -1.13
HDAC8-211ENST00000415409 SLC4A3P48751 1232 aa8.01□□□□□ -1.13
HDAC8-211ENST00000415409 RABEP1Q15276 862 aa8.01□□□□□ -1.13
HDAC8-211ENST00000415409 SF3B3Q15393 1217 aaKnown RBP8.01□□□□□ -1.13
HDAC8-211ENST00000415409 LRRFIP1Q32MZ4 808 aaKnown RBP8.01□□□□□ -1.13
HDAC8-211ENST00000415409 ERFEQ4G0M1 354 aa8.01□□□□□ -1.13
HDAC8-211ENST00000415409 SLC10A5Q5PT55 438 aa8.01□□□□□ -1.13
HDAC8-211ENST00000415409 TTC39AQ5SRH9 613 aa8.01□□□□□ -1.13
HDAC8-211ENST00000415409 CWC27Q6UX04 472 aaKnown RBP8.01□□□□□ -1.13
HDAC8-211ENST00000415409 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.01□□□□□ -1.13
HDAC8-211ENST00000415409 TATDN2Q93075 761 aa8.01□□□□□ -1.13
HDAC8-211ENST00000415409 SNX21Q969T3 373 aa8.01□□□□□ -1.13
HDAC8-211ENST00000415409 DNAJC2Q99543 621 aaKnown RBP8.01□□□□□ -1.13
HDAC8-211ENST00000415409 HAUS7Q99871 368 aa8.01□□□□□ -1.13
HDAC8-211ENST00000415409 CDHR5Q9HBB8 845 aa8.01□□□□□ -1.13
HDAC8-211ENST00000415409 LRRC4BQ9NT99 713 aa8.01□□□□□ -1.13
HDAC8-211ENST00000415409 RIPOR2Q9Y4F9 1068 aa8.01□□□□□ -1.13
HDAC8-211ENST00000415409 ARIH1Q9Y4X5 557 aaPredicted RBP8.01□□□□□ -1.13
HDAC8-211ENST00000415409 RAD50Q92878 1312 aa8.01□□□□□ -1.13
HDAC8-211ENST00000415409 NUP188Q5SRE5 1749 aa8□□□□□ -1.13
HDAC8-211ENST00000415409 NHSQ6T4R5 1651 aa8□□□□□ -1.13
HDAC8-211ENST00000415409 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8□□□□□ -1.13
HDAC8-211ENST00000415409 PDE8BO95263 885 aa8□□□□□ -1.13
HDAC8-211ENST00000415409 APBA3O96018 575 aa8□□□□□ -1.13
HDAC8-211ENST00000415409 IFIT1P09914 478 aaKnown RBP8□□□□□ -1.13
HDAC8-211ENST00000415409 ANAPC15P60006 121 aa8□□□□□ -1.13
HDAC8-211ENST00000415409 PUM3Q15397 648 aaKnown RBP8□□□□□ -1.13
HDAC8-211ENST00000415409 TXNRD1Q16881 649 aa8□□□□□ -1.13
HDAC8-211ENST00000415409 DEFB132Q7Z7B7 95 aa8□□□□□ -1.13
HDAC8-211ENST00000415409 IL27Q8NEV9 243 aa8□□□□□ -1.13
HDAC8-211ENST00000415409 XAGE2Q96GT9 111 aa8□□□□□ -1.13
HDAC8-211ENST00000415409 NLRP3Q96P20 1036 aa8□□□□□ -1.13
HDAC8-211ENST00000415409 TBC1D2Q9BYX2 928 aa8□□□□□ -1.13
HDAC8-211ENST00000415409 RFX7Q2KHR2 1363 aa7.99□□□□□ -1.13
HDAC8-211ENST00000415409 ZNF609O15014 1411 aa7.99□□□□□ -1.13
HDAC8-211ENST00000415409 PLSCR1O15162 318 aa7.99□□□□□ -1.13
HDAC8-211ENST00000415409 SLC5A1P13866 664 aa7.99□□□□□ -1.13
HDAC8-211ENST00000415409 NUDT18Q6ZVK8 323 aa7.99□□□□□ -1.13
HDAC8-211ENST00000415409 SMIM5Q71RC9 77 aa7.99□□□□□ -1.13
HDAC8-211ENST00000415409 ANKRD18AQ8IVF6 992 aa7.99□□□□□ -1.13
HDAC8-211ENST00000415409 KBTBD3Q8NAB2 608 aa7.99□□□□□ -1.13
HDAC8-211ENST00000415409 LPIN2Q92539 896 aa7.99□□□□□ -1.13
HDAC8-211ENST00000415409 KIF2CQ99661 725 aa7.99□□□□□ -1.13
HDAC8-211ENST00000415409 SEC31BQ9NQW1 1179 aa7.99□□□□□ -1.13
HDAC8-211ENST00000415409 PAG1Q9NWQ8 432 aa7.99□□□□□ -1.13
HDAC8-211ENST00000415409 FAM198AQ9UFP1 575 aa7.99□□□□□ -1.13
HDAC8-211ENST00000415409 ZNF831Q5JPB2 1677 aa7.98□□□□□ -1.13
HDAC8-211ENST00000415409 CARMIL3Q8ND23 1372 aa7.98□□□□□ -1.13
HDAC8-211ENST00000415409 ABCC12Q96J65 1359 aa7.98□□□□□ -1.13
HDAC8-211ENST00000415409 GOLIM4O00461 696 aa7.98□□□□□ -1.13
HDAC8-211ENST00000415409 UQCRFS1P1P0C7P4 283 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms