RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 CDCA5Q96FF9 252 aa12.72□□□□□ -0.37
NCKIPSD-202ENST00000413374 CACNA1FO60840 1977 aa12.72□□□□□ -0.37
NCKIPSD-202ENST00000413374 SCN9AQ15858 1988 aa12.72□□□□□ -0.37
NCKIPSD-202ENST00000413374 SPEF2Q9C093 1822 aa12.72□□□□□ -0.37
NCKIPSD-202ENST00000413374 ECE1P42892 770 aa12.71□□□□□ -0.37
NCKIPSD-202ENST00000413374 RBM5P52756 815 aaKnown RBP eCLIP12.71□□□□□ -0.37
NCKIPSD-202ENST00000413374 HUNKP57058 714 aa12.71□□□□□ -0.37
NCKIPSD-202ENST00000413374 CAVIN4Q5BKX8 364 aa12.71□□□□□ -0.37
NCKIPSD-202ENST00000413374 ZKSCAN2Q63HK3 967 aa12.71□□□□□ -0.37
NCKIPSD-202ENST00000413374 ATG9AQ7Z3C6 839 aa12.71□□□□□ -0.37
NCKIPSD-202ENST00000413374 FBXO33Q7Z6M2 555 aa12.71□□□□□ -0.37
NCKIPSD-202ENST00000413374 TMEM57Q8N5G2 664 aa12.71□□□□□ -0.37
NCKIPSD-202ENST00000413374 VGLL2Q8N8G2 317 aa12.71□□□□□ -0.37
NCKIPSD-202ENST00000413374 TDRD7Q8NHU6 1098 aaKnown RBP12.71□□□□□ -0.37
NCKIPSD-202ENST00000413374 GBA2Q9HCG7 927 aaPredicted RBP12.71□□□□□ -0.37
NCKIPSD-202ENST00000413374 MYH3P11055 1940 aa12.7□□□□□ -0.38
NCKIPSD-202ENST00000413374 FOXN1O15353 648 aa12.7□□□□□ -0.38
NCKIPSD-202ENST00000413374 GNAI3P08754 354 aa12.7□□□□□ -0.38
NCKIPSD-202ENST00000413374 IFIT1P09914 478 aaKnown RBP12.7□□□□□ -0.38
NCKIPSD-202ENST00000413374 DLGAP5Q15398 846 aa12.7□□□□□ -0.38
NCKIPSD-202ENST00000413374 CFAP100Q494V2 611 aa12.7□□□□□ -0.38
NCKIPSD-202ENST00000413374 MOB2Q70IA6 237 aa12.7□□□□□ -0.38
NCKIPSD-202ENST00000413374 AIDAQ96BJ3 306 aa12.7□□□□□ -0.38
NCKIPSD-202ENST00000413374 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.7□□□□□ -0.38
NCKIPSD-202ENST00000413374 HDAC5Q9UQL6 1122 aa12.7□□□□□ -0.38
NCKIPSD-202ENST00000413374 ZBED9Q6R2W3 1325 aa12.69□□□□□ -0.38
NCKIPSD-202ENST00000413374 CLRN2A0PK11 232 aa12.69□□□□□ -0.38
NCKIPSD-202ENST00000413374 PRKG1Q13976 671 aa12.69□□□□□ -0.38
NCKIPSD-202ENST00000413374 PUM3Q15397 648 aaKnown RBP12.69□□□□□ -0.38
NCKIPSD-202ENST00000413374 GRIK5Q16478 980 aa12.69□□□□□ -0.38
NCKIPSD-202ENST00000413374 MFSD14BQ5SR56 506 aa12.69□□□□□ -0.38
NCKIPSD-202ENST00000413374 PRMT6Q96LA8 375 aaPredicted RBP12.69□□□□□ -0.38
NCKIPSD-202ENST00000413374 ZIC5Q96T25 663 aa12.69□□□□□ -0.38
NCKIPSD-202ENST00000413374 WBP1LQ9NX94 342 aa12.69□□□□□ -0.38
NCKIPSD-202ENST00000413374 CEP126Q9P2H0 1117 aa12.69□□□□□ -0.38
NCKIPSD-202ENST00000413374 FAM205AQ6ZU69 1335 aa12.68□□□□□ -0.38
NCKIPSD-202ENST00000413374 SRGAP3O43295 1099 aa12.68□□□□□ -0.38
NCKIPSD-202ENST00000413374 SLC5A1P13866 664 aa12.68□□□□□ -0.38
NCKIPSD-202ENST00000413374 FGFR2P21802 821 aa12.68□□□□□ -0.38
NCKIPSD-202ENST00000413374 ZNF157P51786 506 aaPredicted RBP12.68□□□□□ -0.38
NCKIPSD-202ENST00000413374 TTLL12Q14166 644 aaPredicted RBP12.68□□□□□ -0.38
NCKIPSD-202ENST00000413374 TTF2Q9UNY4 1162 aaKnown RBP12.68□□□□□ -0.38
NCKIPSD-202ENST00000413374 ZNF609O15014 1411 aa12.68□□□□□ -0.38
NCKIPSD-202ENST00000413374 AOX1Q06278 1338 aa12.67□□□□□ -0.38
NCKIPSD-202ENST00000413374 UBE2Q2LH0YL09 131 aa12.67□□□□□ -0.38
NCKIPSD-202ENST00000413374 GNAI2P04899 355 aa12.67□□□□□ -0.38
NCKIPSD-202ENST00000413374 FKBP1AP62942 108 aaKnown RBP12.67□□□□□ -0.38
NCKIPSD-202ENST00000413374 MAP2K1Q02750 393 aaPredicted RBP12.67□□□□□ -0.38
NCKIPSD-202ENST00000413374 RGMBQ6NW40 437 aa12.67□□□□□ -0.38
NCKIPSD-202ENST00000413374 FTSJ3Q8IY81 847 aaKnown RBP12.67□□□□□ -0.38
NCKIPSD-202ENST00000413374 LPIN2Q92539 896 aa12.67□□□□□ -0.38
NCKIPSD-202ENST00000413374 ZBED3Q96IU2 234 aaPredicted RBP12.67□□□□□ -0.38
NCKIPSD-202ENST00000413374 C1orf115Q9H7X2 142 aa12.67□□□□□ -0.38
NCKIPSD-202ENST00000413374 VEZTQ9HBM0 779 aa12.67□□□□□ -0.38
NCKIPSD-202ENST00000413374 TSKSQ9UJT2 592 aa12.67□□□□□ -0.38
NCKIPSD-202ENST00000413374 FZD1Q9UP38 647 aa12.67□□□□□ -0.38
NCKIPSD-202ENST00000413374 PITPNM2Q9BZ72 1349 aa12.66□□□□□ -0.38
NCKIPSD-202ENST00000413374 CIAO1O76071 339 aa12.66□□□□□ -0.38
NCKIPSD-202ENST00000413374 RLBP1P12271 317 aa12.66□□□□□ -0.38
NCKIPSD-202ENST00000413374 IL15P40933 162 aaPredicted RBP12.66□□□□□ -0.38
NCKIPSD-202ENST00000413374 LBX1P52954 281 aa12.66□□□□□ -0.38
NCKIPSD-202ENST00000413374 TIMM10P62072 90 aa12.66□□□□□ -0.38
NCKIPSD-202ENST00000413374 ATP2B3Q16720 1220 aa12.66□□□□□ -0.38
NCKIPSD-202ENST00000413374 ITPRIPQ8IWB1 547 aa12.66□□□□□ -0.38
NCKIPSD-202ENST00000413374 DZIP1LQ8IYY4 767 aaKnown RBP12.66□□□□□ -0.38
NCKIPSD-202ENST00000413374 TDRD3Q9H7E2 651 aaKnown RBP12.66□□□□□ -0.38
NCKIPSD-202ENST00000413374 COPRSQ9NQ92 184 aa12.66□□□□□ -0.38
NCKIPSD-202ENST00000413374 PNMA6EA0A0J9YXQ4 647 aa12.65□□□□□ -0.38
NCKIPSD-202ENST00000413374 SPDYE2BA6NHP3 402 aa12.65□□□□□ -0.38
NCKIPSD-202ENST00000413374 SPDYE6P0CI01 402 aa12.65□□□□□ -0.38
NCKIPSD-202ENST00000413374 ADORA1P30542 326 aa12.65□□□□□ -0.38
NCKIPSD-202ENST00000413374 MAP2K2P36507 400 aa12.65□□□□□ -0.38
NCKIPSD-202ENST00000413374 CTCFP49711 727 aaPredicted RBP12.65□□□□□ -0.38
NCKIPSD-202ENST00000413374 MMP14P50281 582 aa12.65□□□□□ -0.38
NCKIPSD-202ENST00000413374 TFCP2Q12800 502 aa12.65□□□□□ -0.38
NCKIPSD-202ENST00000413374 APOBEC3FQ8IUX4 373 aaKnown RBP12.65□□□□□ -0.38
NCKIPSD-202ENST00000413374 HHIPL1Q96JK4 782 aa12.65□□□□□ -0.38
NCKIPSD-202ENST00000413374 BEGAINQ9BUH8 593 aa12.65□□□□□ -0.38
NCKIPSD-202ENST00000413374 DEFB129Q9H1M3 183 aa12.65□□□□□ -0.38
NCKIPSD-202ENST00000413374 MYO1BO43795 1136 aa12.64□□□□□ -0.39
NCKIPSD-202ENST00000413374 CRKP46108 304 aa12.64□□□□□ -0.39
NCKIPSD-202ENST00000413374 KIF23Q02241 960 aaPredicted RBP12.64□□□□□ -0.39
NCKIPSD-202ENST00000413374 MTMR14Q8NCE2 650 aa12.64□□□□□ -0.39
NCKIPSD-202ENST00000413374 PANK1Q8TE04 598 aa12.64□□□□□ -0.39
NCKIPSD-202ENST00000413374 FBXO3Q9UK99 471 aa12.64□□□□□ -0.39
NCKIPSD-202ENST00000413374 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.64□□□□□ -0.39
NCKIPSD-202ENST00000413374 PCNTO95613 3336 aa12.64□□□□□ -0.39
NCKIPSD-202ENST00000413374 FAM155AB1AL88 458 aaPredicted RBP12.63□□□□□ -0.39
NCKIPSD-202ENST00000413374 TCP10L2B9ZVM9 353 aa12.63□□□□□ -0.39
NCKIPSD-202ENST00000413374 HSPA8P11142 646 aaKnown RBP12.63□□□□□ -0.39
NCKIPSD-202ENST00000413374 NF2P35240 595 aa12.63□□□□□ -0.39
NCKIPSD-202ENST00000413374 PHKA1P46020 1223 aa12.63□□□□□ -0.39
NCKIPSD-202ENST00000413374 MKRN3Q13064 507 aaKnown RBP12.63□□□□□ -0.39
NCKIPSD-202ENST00000413374 G3BP1Q13283 466 aaKnown RBP eCLIP12.63□□□□□ -0.39
NCKIPSD-202ENST00000413374 IFFO2Q5TF58 517 aa12.63□□□□□ -0.39
NCKIPSD-202ENST00000413374 TNS4Q8IZW8 715 aa12.63□□□□□ -0.39
NCKIPSD-202ENST00000413374 TBC1D22AQ8WUA7 517 aa12.63□□□□□ -0.39
NCKIPSD-202ENST00000413374 CCDC102AQ96A19 550 aa12.63□□□□□ -0.39
NCKIPSD-202ENST00000413374 NEUROD6Q96NK8 337 aa12.63□□□□□ -0.39
NCKIPSD-202ENST00000413374 ZNF70Q9UC06 446 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms