RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 AOX1Q06278 1338 aa24.33■■□□□ 1.48
CPSF7-204ENST00000413232 MMP14P50281 582 aa24.32■■□□□ 1.48
CPSF7-204ENST00000413232 TAF7LQ5H9L4 462 aa24.32■■□□□ 1.48
CPSF7-204ENST00000413232 UTYO14607 1347 aa24.32■■□□□ 1.48
CPSF7-204ENST00000413232 F8W031 263 aaPredicted RBP24.31■■□□□ 1.48
CPSF7-204ENST00000413232 DGKZQ13574 1117 aa24.31■■□□□ 1.48
CPSF7-204ENST00000413232 ZNF804AQ7Z570 1209 aa24.31■■□□□ 1.48
CPSF7-204ENST00000413232 FZD1Q9UP38 647 aa24.31■■□□□ 1.48
CPSF7-204ENST00000413232 PRKG1Q13976 671 aa24.3■■□□□ 1.48
CPSF7-204ENST00000413232 TTLL12Q14166 644 aaPredicted RBP24.3■■□□□ 1.48
CPSF7-204ENST00000413232 DLGAP5Q15398 846 aa24.29■■□□□ 1.48
CPSF7-204ENST00000413232 APOBEC3FQ8IUX4 373 aaKnown RBP24.29■■□□□ 1.48
CPSF7-204ENST00000413232 MTMR14Q8NCE2 650 aa24.29■■□□□ 1.48
CPSF7-204ENST00000413232 SSH1Q8WYL5 1049 aa24.29■■□□□ 1.48
CPSF7-204ENST00000413232 BICC1Q9H694 974 aaKnown RBP24.29■■□□□ 1.48
CPSF7-204ENST00000413232 RIPOR2Q9Y4F9 1068 aa24.29■■□□□ 1.48
CPSF7-204ENST00000413232 GYG1P46976 350 aa24.28■■□□□ 1.48
CPSF7-204ENST00000413232 PTPN12Q05209 780 aaKnown RBP24.28■■□□□ 1.48
CPSF7-204ENST00000413232 PRMT6Q96LA8 375 aaPredicted RBP24.28■■□□□ 1.48
CPSF7-204ENST00000413232 FKBP1AP62942 108 aaKnown RBP24.27■■□□□ 1.48
CPSF7-204ENST00000413232 SLFN5Q08AF3 891 aa24.27■■□□□ 1.48
CPSF7-204ENST00000413232 MKRN3Q13064 507 aaKnown RBP24.27■■□□□ 1.48
CPSF7-204ENST00000413232 RABL6Q3YEC7 729 aaPredicted RBP24.27■■□□□ 1.48
CPSF7-204ENST00000413232 CFAP100Q494V2 611 aa24.27■■□□□ 1.48
CPSF7-204ENST00000413232 ANKRD44Q8N8A2 993 aa24.27■■□□□ 1.48
CPSF7-204ENST00000413232 CDCA7LQ96GN5 454 aa24.27■■□□□ 1.48
CPSF7-204ENST00000413232 FAM84BQ96KN1 310 aaPredicted RBP24.27■■□□□ 1.48
CPSF7-204ENST00000413232 DEFB129Q9H1M3 183 aa24.27■■□□□ 1.48
CPSF7-204ENST00000413232 NF2P35240 595 aa24.26■■□□□ 1.47
CPSF7-204ENST00000413232 UBE4AQ14139 1066 aa24.26■■□□□ 1.47
CPSF7-204ENST00000413232 TDRD7Q8NHU6 1098 aaKnown RBP24.26■■□□□ 1.47
CPSF7-204ENST00000413232 SSC5DA1L4H1 1573 aa24.25■■□□□ 1.47
CPSF7-204ENST00000413232 CLRN2A0PK11 232 aa24.25■■□□□ 1.47
CPSF7-204ENST00000413232 SPDYE2BA6NHP3 402 aa24.25■■□□□ 1.47
CPSF7-204ENST00000413232 E9PSI1 815 aa24.25■■□□□ 1.47
CPSF7-204ENST00000413232 SPDYE6P0CI01 402 aa24.25■■□□□ 1.47
CPSF7-204ENST00000413232 LRRC24Q50LG9 513 aa24.25■■□□□ 1.47
CPSF7-204ENST00000413232 LDLRAD1Q5T700 205 aa24.25■■□□□ 1.47
CPSF7-204ENST00000413232 FAM205AQ6ZU69 1335 aa24.25■■□□□ 1.47
CPSF7-204ENST00000413232 REM2Q8IYK8 340 aaPredicted RBP24.24■■□□□ 1.47
CPSF7-204ENST00000413232 USP44Q9H0E7 712 aa24.24■■□□□ 1.47
CPSF7-204ENST00000413232 ANGEL1Q9UNK9 670 aaKnown RBP24.24■■□□□ 1.47
CPSF7-204ENST00000413232 ARAP2Q8WZ64 1704 aa24.24■■□□□ 1.47
CPSF7-204ENST00000413232 HIBADHP31937 336 aaKnown RBP24.23■■□□□ 1.47
CPSF7-204ENST00000413232 RGS19P49795 217 aa24.23■■□□□ 1.47
CPSF7-204ENST00000413232 KLHDC4Q8TBB5 520 aa24.23■■□□□ 1.47
CPSF7-204ENST00000413232 PTPRCP08575 1304 aa24.23■■□□□ 1.47
CPSF7-204ENST00000413232 TBC1D8O95759 1140 aa24.22■■□□□ 1.47
CPSF7-204ENST00000413232 TM4SF4P48230 202 aa24.22■■□□□ 1.47
CPSF7-204ENST00000413232 GRIK5Q16478 980 aa24.22■■□□□ 1.47
CPSF7-204ENST00000413232 ARMC9Q7Z3E5 817 aa24.22■■□□□ 1.47
CPSF7-204ENST00000413232 COL1A1P02452 1464 aaPredicted RBP24.21■■□□□ 1.47
CPSF7-204ENST00000413232 MFSD14BQ5SR56 506 aa24.21■■□□□ 1.47
CPSF7-204ENST00000413232 VGLL2Q8N8G2 317 aa24.21■■□□□ 1.47
CPSF7-204ENST00000413232 MROH5Q6ZUA9 1318 aa24.2■■□□□ 1.46
CPSF7-204ENST00000413232 NBPF12Q5TAG4 269 aaPredicted RBP24.2■■□□□ 1.46
CPSF7-204ENST00000413232 FBXO33Q7Z6M2 555 aa24.2■■□□□ 1.46
CPSF7-204ENST00000413232 VEZTQ9HBM0 779 aa24.2■■□□□ 1.46
CPSF7-204ENST00000413232 IQSEC3Q9UPP2 1182 aaPredicted RBP24.2■■□□□ 1.46
CPSF7-204ENST00000413232 RBM5P52756 815 aaKnown RBP eCLIP24.19■■□□□ 1.46
CPSF7-204ENST00000413232 SPRYD7Q5W111 196 aa24.19■■□□□ 1.46
CPSF7-204ENST00000413232 TRMT2AQ8IZ69 625 aaKnown RBP24.19■■□□□ 1.46
CPSF7-204ENST00000413232 CLMNQ96JQ2 1002 aa24.19■■□□□ 1.46
CPSF7-204ENST00000413232 R3HDMLQ9H3Y0 253 aa24.19■■□□□ 1.46
CPSF7-204ENST00000413232 TTF2Q9UNY4 1162 aaKnown RBP24.19■■□□□ 1.46
CPSF7-204ENST00000413232 MAP3K11Q16584 847 aa24.18■■□□□ 1.46
CPSF7-204ENST00000413232 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.18■■□□□ 1.46
CPSF7-204ENST00000413232 LAMB1P07942 1786 aa24.18■■□□□ 1.46
CPSF7-204ENST00000413232 OTOFQ9HC10 1997 aa24.17■■□□□ 1.46
CPSF7-204ENST00000413232 MYO1BO43795 1136 aa24.17■■□□□ 1.46
CPSF7-204ENST00000413232 RASA3Q14644 834 aa24.17■■□□□ 1.46
CPSF7-204ENST00000413232 METTL24Q5JXM2 366 aa24.17■■□□□ 1.46
CPSF7-204ENST00000413232 TDRD3Q9H7E2 651 aaKnown RBP24.17■■□□□ 1.46
CPSF7-204ENST00000413232 PPP2R3BQ9Y5P8 575 aa24.17■■□□□ 1.46
CPSF7-204ENST00000413232 PDE8BO95263 885 aa24.16■■□□□ 1.46
CPSF7-204ENST00000413232 CTU1Q7Z7A3 348 aaKnown RBP24.16■■□□□ 1.46
CPSF7-204ENST00000413232 CDAN1Q8IWY9 1227 aa24.16■■□□□ 1.46
CPSF7-204ENST00000413232 ZNF296Q8WUU4 475 aaPredicted RBP24.16■■□□□ 1.46
CPSF7-204ENST00000413232 ZNF70Q9UC06 446 aaPredicted RBP24.16■■□□□ 1.46
CPSF7-204ENST00000413232 TNRC18O15417 2968 aaPredicted RBP24.16■■□□□ 1.46
CPSF7-204ENST00000413232 USP2O75604 605 aaPredicted RBP24.15■■□□□ 1.46
CPSF7-204ENST00000413232 RFX5P48382 616 aaPredicted RBP24.15■■□□□ 1.46
CPSF7-204ENST00000413232 MLLT1Q03111 559 aaPredicted RBP24.15■■□□□ 1.46
CPSF7-204ENST00000413232 ALDH1L2Q3SY69 923 aa24.15■■□□□ 1.46
CPSF7-204ENST00000413232 SPDYE2Q495Y8 402 aa24.15■■□□□ 1.46
CPSF7-204ENST00000413232 DZIP1LQ8IYY4 767 aaKnown RBP24.15■■□□□ 1.46
CPSF7-204ENST00000413232 SLC10A4Q96EP9 437 aa24.15■■□□□ 1.46
CPSF7-204ENST00000413232 SERPINA10Q9UK55 444 aa24.15■■□□□ 1.46
CPSF7-204ENST00000413232 MYH13Q9UKX3 1938 aa24.14■■□□□ 1.46
CPSF7-204ENST00000413232 BCAMP50895 628 aa24.14■■□□□ 1.45
CPSF7-204ENST00000413232 CHAF1AQ13111 956 aaPredicted RBP24.14■■□□□ 1.45
CPSF7-204ENST00000413232 GPR25O00155 361 aa24.13■■□□□ 1.45
CPSF7-204ENST00000413232 PPP1R12BO60237 982 aaPredicted RBP24.13■■□□□ 1.45
CPSF7-204ENST00000413232 CRKP46108 304 aa24.13■■□□□ 1.45
CPSF7-204ENST00000413232 SUPT20HL1Q3ZLR7 823 aa24.13■■□□□ 1.45
CPSF7-204ENST00000413232 WNK4Q96J92 1243 aa24.13■■□□□ 1.45
CPSF7-204ENST00000413232 SMC4Q9NTJ3 1288 aa24.13■■□□□ 1.45
CPSF7-204ENST00000413232 FGFR2P21802 821 aa24.12■■□□□ 1.45
CPSF7-204ENST00000413232 GJA5P36382 358 aa24.12■■□□□ 1.45
CPSF7-204ENST00000413232 SREBF2Q12772 1141 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms