RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 IPO8O15397 1037 aaKnown RBP22.16■■□□□ 1.14
LSM5-204ENST00000409909 ECE1P42892 770 aa22.16■■□□□ 1.14
LSM5-204ENST00000409909 COL13A1Q5TAT6 717 aaPredicted RBP22.16■■□□□ 1.14
LSM5-204ENST00000409909 ATF7IPQ6VMQ6 1270 aa22.16■■□□□ 1.14
LSM5-204ENST00000409909 WBP1LQ9NX94 342 aa22.16■■□□□ 1.14
LSM5-204ENST00000409909 FAM205AQ6ZU69 1335 aa22.15■■□□□ 1.14
LSM5-204ENST00000409909 EYA2O00167 538 aa22.15■■□□□ 1.14
LSM5-204ENST00000409909 FOXN1O15353 648 aa22.15■■□□□ 1.14
LSM5-204ENST00000409909 FKBP1AP62942 108 aaKnown RBP22.15■■□□□ 1.14
LSM5-204ENST00000409909 ATG9AQ7Z3C6 839 aa22.15■■□□□ 1.14
LSM5-204ENST00000409909 FBXO33Q7Z6M2 555 aa22.15■■□□□ 1.14
LSM5-204ENST00000409909 GBA2Q9HCG7 927 aaPredicted RBP22.15■■□□□ 1.14
LSM5-204ENST00000409909 HDAC9Q9UKV0 1011 aa22.15■■□□□ 1.14
LSM5-204ENST00000409909 ZBED9Q6R2W3 1325 aa22.14■■□□□ 1.14
LSM5-204ENST00000409909 AOC2O75106 756 aa22.14■■□□□ 1.13
LSM5-204ENST00000409909 HUNKP57058 714 aa22.14■■□□□ 1.13
LSM5-204ENST00000409909 PCDHAC2Q9Y5I4 1007 aa22.14■■□□□ 1.13
LSM5-204ENST00000409909 THSD7BQ9C0I4 1608 aa22.13■■□□□ 1.13
LSM5-204ENST00000409909 F8W031 263 aaPredicted RBP22.13■■□□□ 1.13
LSM5-204ENST00000409909 FGFR2P21802 821 aa22.13■■□□□ 1.13
LSM5-204ENST00000409909 C2orf69Q8N8R5 385 aa22.13■■□□□ 1.13
LSM5-204ENST00000409909 CLUAP1Q96AJ1 413 aa22.13■■□□□ 1.13
LSM5-204ENST00000409909 PRAMEF18Q5VWM3 479 aa22.12■■□□□ 1.13
LSM5-204ENST00000409909 SIL1Q9H173 461 aa22.12■■□□□ 1.13
LSM5-204ENST00000409909 IQSEC3Q9UPP2 1182 aaPredicted RBP22.12■■□□□ 1.13
LSM5-204ENST00000409909 HDAC5Q9UQL6 1122 aa22.12■■□□□ 1.13
LSM5-204ENST00000409909 BCAMP50895 628 aa22.11■■□□□ 1.13
LSM5-204ENST00000409909 PUM3Q15397 648 aaKnown RBP22.11■■□□□ 1.13
LSM5-204ENST00000409909 DLGAP5Q15398 846 aa22.11■■□□□ 1.13
LSM5-204ENST00000409909 MTMR14Q8NCE2 650 aa22.11■■□□□ 1.13
LSM5-204ENST00000409909 CIAO1O76071 339 aa22.1■■□□□ 1.13
LSM5-204ENST00000409909 GNAI3P08754 354 aa22.1■■□□□ 1.13
LSM5-204ENST00000409909 MAP2K2P36507 400 aa22.1■■□□□ 1.13
LSM5-204ENST00000409909 MAP2K1Q02750 393 aaPredicted RBP22.1■■□□□ 1.13
LSM5-204ENST00000409909 CAVIN4Q5BKX8 364 aa22.1■■□□□ 1.13
LSM5-204ENST00000409909 MFSD14BQ5SR56 506 aa22.1■■□□□ 1.13
LSM5-204ENST00000409909 VPS37DQ86XT2 251 aa22.1■■□□□ 1.13
LSM5-204ENST00000409909 PA2G4Q9UQ80 394 aaKnown RBP22.1■■□□□ 1.13
LSM5-204ENST00000409909 AOX1Q06278 1338 aa22.09■■□□□ 1.13
LSM5-204ENST00000409909 CFAP100Q494V2 611 aa22.09■■□□□ 1.13
LSM5-204ENST00000409909 ZKSCAN2Q63HK3 967 aa22.09■■□□□ 1.13
LSM5-204ENST00000409909 AIDAQ96BJ3 306 aa22.09■■□□□ 1.13
LSM5-204ENST00000409909 ZIC5Q96T25 663 aa22.09■■□□□ 1.13
LSM5-204ENST00000409909 FBXO3Q9UK99 471 aa22.09■■□□□ 1.13
LSM5-204ENST00000409909 IFIT1P09914 478 aaKnown RBP22.08■■□□□ 1.13
LSM5-204ENST00000409909 GRIK5Q16478 980 aa22.08■■□□□ 1.13
LSM5-204ENST00000409909 IFFO2Q5TF58 517 aa22.08■■□□□ 1.13
LSM5-204ENST00000409909 RGMBQ6NW40 437 aa22.08■■□□□ 1.13
LSM5-204ENST00000409909 TMEM57Q8N5G2 664 aa22.08■■□□□ 1.13
LSM5-204ENST00000409909 PRMT6Q96LA8 375 aaPredicted RBP22.08■■□□□ 1.13
LSM5-204ENST00000409909 COPRSQ9NQ92 184 aa22.08■■□□□ 1.13
LSM5-204ENST00000409909 SPDYE2BA6NHP3 402 aa22.07■■□□□ 1.12
LSM5-204ENST00000409909 FAM155AB1AL88 458 aaPredicted RBP22.07■■□□□ 1.12
LSM5-204ENST00000409909 SPDYE6P0CI01 402 aa22.07■■□□□ 1.12
LSM5-204ENST00000409909 MOB2Q70IA6 237 aa22.07■■□□□ 1.12
LSM5-204ENST00000409909 LPIN2Q92539 896 aa22.07■■□□□ 1.12
LSM5-204ENST00000409909 SLC5A1P13866 664 aa22.06■■□□□ 1.12
LSM5-204ENST00000409909 CTCFP49711 727 aaPredicted RBP22.06■■□□□ 1.12
LSM5-204ENST00000409909 CHAF1AQ13111 956 aaPredicted RBP22.06■■□□□ 1.12
LSM5-204ENST00000409909 MTX1Q13505 466 aa22.06■■□□□ 1.12
LSM5-204ENST00000409909 APOBEC3FQ8IUX4 373 aaKnown RBP22.06■■□□□ 1.12
LSM5-204ENST00000409909 CEP126Q9P2H0 1117 aa22.06■■□□□ 1.12
LSM5-204ENST00000409909 TTF2Q9UNY4 1162 aaKnown RBP22.06■■□□□ 1.12
LSM5-204ENST00000409909 SRGAP3O43295 1099 aa22.05■■□□□ 1.12
LSM5-204ENST00000409909 FRAT2O75474 233 aaPredicted RBP22.05■■□□□ 1.12
LSM5-204ENST00000409909 IL15P40933 162 aaPredicted RBP22.05■■□□□ 1.12
LSM5-204ENST00000409909 ZNF157P51786 506 aaPredicted RBP22.05■■□□□ 1.12
LSM5-204ENST00000409909 FKBP1BP68106 108 aa22.05■■□□□ 1.12
LSM5-204ENST00000409909 ARAP2Q8WZ64 1704 aa22.04■■□□□ 1.12
LSM5-204ENST00000409909 CLRN2A0PK11 232 aa22.04■■□□□ 1.12
LSM5-204ENST00000409909 GNAI2P04899 355 aa22.04■■□□□ 1.12
LSM5-204ENST00000409909 HSPA8P11142 646 aaKnown RBP22.04■■□□□ 1.12
LSM5-204ENST00000409909 RBM5P52756 815 aaKnown RBP eCLIP22.04■■□□□ 1.12
LSM5-204ENST00000409909 LBX1P52954 281 aa22.04■■□□□ 1.12
LSM5-204ENST00000409909 NOGQ13253 232 aa22.04■■□□□ 1.12
LSM5-204ENST00000409909 ATP2B3Q16720 1220 aa22.04■■□□□ 1.12
LSM5-204ENST00000409909 DEFB129Q9H1M3 183 aa22.04■■□□□ 1.12
LSM5-204ENST00000409909 SERPINA10Q9UK55 444 aa22.04■■□□□ 1.12
LSM5-204ENST00000409909 PAPPA2Q9BXP8 1791 aa22.04■■□□□ 1.12
LSM5-204ENST00000409909 ECM29Q5VYK3 1845 aa22.03■■□□□ 1.12
LSM5-204ENST00000409909 UBE2Q2LH0YL09 131 aa22.03■■□□□ 1.12
LSM5-204ENST00000409909 RLBP1P12271 317 aa22.03■■□□□ 1.12
LSM5-204ENST00000409909 CCDC102AQ96A19 550 aa22.03■■□□□ 1.12
LSM5-204ENST00000409909 TBC1D22AQ8WUA7 517 aa22.02■■□□□ 1.12
LSM5-204ENST00000409909 PRDM10Q9NQV6 1147 aa22.02■■□□□ 1.12
LSM5-204ENST00000409909 PNMA6EA0A0J9YXQ4 647 aa22.01■■□□□ 1.11
LSM5-204ENST00000409909 MYO1BO43795 1136 aa22.01■■□□□ 1.11
LSM5-204ENST00000409909 SLC10A3P09131 477 aa22.01■■□□□ 1.11
LSM5-204ENST00000409909 CRKP46108 304 aa22.01■■□□□ 1.11
LSM5-204ENST00000409909 DZIP1LQ8IYY4 767 aaKnown RBP22.01■■□□□ 1.11
LSM5-204ENST00000409909 BEGAINQ9BUH8 593 aa22.01■■□□□ 1.11
LSM5-204ENST00000409909 KIF23Q02241 960 aaPredicted RBP22■■□□□ 1.11
LSM5-204ENST00000409909 TNS4Q8IZW8 715 aa22■■□□□ 1.11
LSM5-204ENST00000409909 TDRD3Q9H7E2 651 aaKnown RBP22■■□□□ 1.11
LSM5-204ENST00000409909 VEZTQ9HBM0 779 aa22■■□□□ 1.11
LSM5-204ENST00000409909 ZNF70Q9UC06 446 aaPredicted RBP22■■□□□ 1.11
LSM5-204ENST00000409909 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22■■□□□ 1.11
LSM5-204ENST00000409909 COL1A1P02452 1464 aaPredicted RBP22■■□□□ 1.11
LSM5-204ENST00000409909 ADORA1P30542 326 aa21.99■■□□□ 1.11
LSM5-204ENST00000409909 NF2P35240 595 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms